Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R49:R145
Extra
PDB:
ATOM 1 O3' G A 48 100.343 -38.816 7.501 1.00 55.83 O
ATOM 2 P A A 49 101.942 -38.820 7.349 1.00 57.19 P
ATOM 3 OP1 A A 49 102.245 -38.925 5.908 1.00 56.98 O
ATOM 4 OP2 A A 49 102.523 -39.789 8.318 1.00 54.80 O
ATOM 5 O5' A A 49 102.303 -37.340 7.844 1.00 56.71 O
ATOM 6 C5' A A 49 103.616 -36.805 7.775 1.00 54.52 C
ATOM 7 C4' A A 49 103.566 -35.378 7.265 1.00 52.23 C
ATOM 8 O4' A A 49 103.152 -35.410 5.883 1.00 53.95 O
ATOM 9 C3' A A 49 102.550 -34.452 7.916 1.00 53.05 C
ATOM 10 O3' A A 49 103.075 -33.877 9.113 1.00 52.26 O
ATOM 11 C2' A A 49 102.275 -33.411 6.831 1.00 53.09 C
ATOM 12 O2' A A 49 103.191 -32.328 6.831 1.00 52.05 O
ATOM 13 C1' A A 49 102.400 -34.250 5.566 1.00 51.61 C
ATOM 14 N9 A A 49 101.150 -34.681 4.938 1.00 52.17 N
ATOM 15 C8 A A 49 100.685 -35.964 4.803 1.00 50.21 C
ATOM 16 N7 A A 49 99.547 -36.041 4.161 1.00 49.74 N
ATOM 17 C5 A A 49 99.245 -34.730 3.837 1.00 51.03 C
ATOM 18 C6 A A 49 98.164 -34.137 3.141 1.00 51.69 C
ATOM 19 N6 A A 49 97.142 -34.836 2.633 1.00 50.80 N
ATOM 20 N1 A A 49 98.173 -32.787 3.000 1.00 52.29 N
ATOM 21 C2 A A 49 99.189 -32.071 3.513 1.00 52.24 C
ATOM 22 N3 A A 49 100.262 -32.523 4.172 1.00 53.72 N
ATOM 23 C4 A A 49 100.226 -33.871 4.310 1.00 52.87 C
ATOM 24 P A A 50 102.158 -33.837 10.422 1.00 52.20 P
ATOM 25 OP1 A A 50 103.034 -33.426 11.542 1.00 53.29 O
ATOM 26 OP2 A A 50 101.346 -35.077 10.490 1.00 47.62 O
ATOM 27 O5' A A 50 101.176 -32.613 10.124 1.00 52.21 O
TER
ATOM 1 O3' U B 144 91.684 -27.275 -5.838 1.00 62.64 O
ATOM 2 P A B 145 90.832 -27.670 -4.535 1.00 65.66 P
ATOM 3 OP1 A B 145 89.414 -27.738 -4.953 1.00 63.73 O
ATOM 4 OP2 A B 145 91.222 -26.777 -3.420 1.00 63.99 O
ATOM 5 O5' A B 145 91.354 -29.145 -4.183 1.00 65.54 O
ATOM 6 C5' A B 145 91.267 -30.207 -5.136 1.00 66.22 C
ATOM 7 C4' A B 145 91.012 -31.532 -4.447 1.00 65.10 C
ATOM 8 O4' A B 145 92.118 -31.810 -3.553 1.00 64.49 O
ATOM 9 C3' A B 145 89.755 -31.582 -3.582 1.00 67.27 C
ATOM 10 O3' A B 145 89.129 -32.856 -3.664 1.00 71.18 O
ATOM 11 C2' A B 145 90.286 -31.331 -2.174 1.00 66.58 C
ATOM 12 O2' A B 145 89.478 -31.876 -1.146 1.00 64.21 O
ATOM 13 C1' A B 145 91.617 -32.066 -2.251 1.00 65.00 C
ATOM 14 N9 A B 145 92.588 -31.680 -1.224 1.00 65.33 N
ATOM 15 C8 A B 145 92.750 -30.455 -0.627 1.00 64.34 C
ATOM 16 N7 A B 145 93.707 -30.428 0.271 1.00 63.47 N
ATOM 17 C5 A B 145 94.206 -31.718 0.267 1.00 65.72 C
ATOM 18 C6 A B 145 95.236 -32.341 1.000 1.00 64.98 C
ATOM 19 N6 A B 145 95.966 -31.691 1.910 1.00 65.09 N
ATOM 20 N1 A B 145 95.482 -33.652 0.762 1.00 64.49 N
ATOM 21 C2 A B 145 94.741 -34.291 -0.154 1.00 64.24 C
ATOM 22 N3 A B 145 93.746 -33.812 -0.903 1.00 64.25 N
ATOM 23 C4 A B 145 93.529 -32.507 -0.648 1.00 65.66 C
ATOM 24 P U B 146 88.059 -33.178 -4.807 1.00 74.96 P
ATOM 25 OP1 U B 146 88.456 -32.454 -6.038 1.00 74.63 O
ATOM 26 OP2 U B 146 86.713 -32.975 -4.224 1.00 73.58 O
ATOM 27 O5' U B 146 88.287 -34.742 -5.069 1.00 76.14 O
TER
ATOM 2 P A A 49 101.942 -38.820 7.349 1.00 57.19 P
ATOM 3 OP1 A A 49 102.245 -38.925 5.908 1.00 56.98 O
ATOM 4 OP2 A A 49 102.523 -39.789 8.318 1.00 54.80 O
ATOM 5 O5' A A 49 102.303 -37.340 7.844 1.00 56.71 O
ATOM 6 C5' A A 49 103.616 -36.805 7.775 1.00 54.52 C
ATOM 7 C4' A A 49 103.566 -35.378 7.265 1.00 52.23 C
ATOM 8 O4' A A 49 103.152 -35.410 5.883 1.00 53.95 O
ATOM 9 C3' A A 49 102.550 -34.452 7.916 1.00 53.05 C
ATOM 10 O3' A A 49 103.075 -33.877 9.113 1.00 52.26 O
ATOM 11 C2' A A 49 102.275 -33.411 6.831 1.00 53.09 C
ATOM 12 O2' A A 49 103.191 -32.328 6.831 1.00 52.05 O
ATOM 13 C1' A A 49 102.400 -34.250 5.566 1.00 51.61 C
ATOM 14 N9 A A 49 101.150 -34.681 4.938 1.00 52.17 N
ATOM 15 C8 A A 49 100.685 -35.964 4.803 1.00 50.21 C
ATOM 16 N7 A A 49 99.547 -36.041 4.161 1.00 49.74 N
ATOM 17 C5 A A 49 99.245 -34.730 3.837 1.00 51.03 C
ATOM 18 C6 A A 49 98.164 -34.137 3.141 1.00 51.69 C
ATOM 19 N6 A A 49 97.142 -34.836 2.633 1.00 50.80 N
ATOM 20 N1 A A 49 98.173 -32.787 3.000 1.00 52.29 N
ATOM 21 C2 A A 49 99.189 -32.071 3.513 1.00 52.24 C
ATOM 22 N3 A A 49 100.262 -32.523 4.172 1.00 53.72 N
ATOM 23 C4 A A 49 100.226 -33.871 4.310 1.00 52.87 C
ATOM 24 P A A 50 102.158 -33.837 10.422 1.00 52.20 P
ATOM 25 OP1 A A 50 103.034 -33.426 11.542 1.00 53.29 O
ATOM 26 OP2 A A 50 101.346 -35.077 10.490 1.00 47.62 O
ATOM 27 O5' A A 50 101.176 -32.613 10.124 1.00 52.21 O
TER
ATOM 1 O3' U B 144 91.684 -27.275 -5.838 1.00 62.64 O
ATOM 2 P A B 145 90.832 -27.670 -4.535 1.00 65.66 P
ATOM 3 OP1 A B 145 89.414 -27.738 -4.953 1.00 63.73 O
ATOM 4 OP2 A B 145 91.222 -26.777 -3.420 1.00 63.99 O
ATOM 5 O5' A B 145 91.354 -29.145 -4.183 1.00 65.54 O
ATOM 6 C5' A B 145 91.267 -30.207 -5.136 1.00 66.22 C
ATOM 7 C4' A B 145 91.012 -31.532 -4.447 1.00 65.10 C
ATOM 8 O4' A B 145 92.118 -31.810 -3.553 1.00 64.49 O
ATOM 9 C3' A B 145 89.755 -31.582 -3.582 1.00 67.27 C
ATOM 10 O3' A B 145 89.129 -32.856 -3.664 1.00 71.18 O
ATOM 11 C2' A B 145 90.286 -31.331 -2.174 1.00 66.58 C
ATOM 12 O2' A B 145 89.478 -31.876 -1.146 1.00 64.21 O
ATOM 13 C1' A B 145 91.617 -32.066 -2.251 1.00 65.00 C
ATOM 14 N9 A B 145 92.588 -31.680 -1.224 1.00 65.33 N
ATOM 15 C8 A B 145 92.750 -30.455 -0.627 1.00 64.34 C
ATOM 16 N7 A B 145 93.707 -30.428 0.271 1.00 63.47 N
ATOM 17 C5 A B 145 94.206 -31.718 0.267 1.00 65.72 C
ATOM 18 C6 A B 145 95.236 -32.341 1.000 1.00 64.98 C
ATOM 19 N6 A B 145 95.966 -31.691 1.910 1.00 65.09 N
ATOM 20 N1 A B 145 95.482 -33.652 0.762 1.00 64.49 N
ATOM 21 C2 A B 145 94.741 -34.291 -0.154 1.00 64.24 C
ATOM 22 N3 A B 145 93.746 -33.812 -0.903 1.00 64.25 N
ATOM 23 C4 A B 145 93.529 -32.507 -0.648 1.00 65.66 C
ATOM 24 P U B 146 88.059 -33.178 -4.807 1.00 74.96 P
ATOM 25 OP1 U B 146 88.456 -32.454 -6.038 1.00 74.63 O
ATOM 26 OP2 U B 146 86.713 -32.975 -4.224 1.00 73.58 O
ATOM 27 O5' U B 146 88.287 -34.742 -5.069 1.00 76.14 O
TER
Atoms:
OP1: (102.245,-38.925,5.908)
OP2: (102.523,-39.789,8.318)
C3': (102.550,-34.452,7.916)
C1': (102.400,-34.250,5.566)
C5': (103.616,-36.805,7.775)
O4': (103.152,-35.410,5.883)
C8: (100.685,-35.964,4.803)
O2': (103.191,-32.328,6.831)
C6: (98.164,-34.137,3.141)
C5: (99.245,-34.730,3.837)
C4: (100.226,-33.871,4.310)
P: (101.942,-38.820,7.349)
C4': (103.566,-35.378,7.265)
C2': (102.275,-33.411,6.831)
C2: (99.189,-32.071,3.513)
N1: (98.173,-32.787,3.000)
N3: (100.262,-32.523,4.172)
N6: (97.142,-34.836,2.633)
N7: (99.547,-36.041,4.161)
N9: (101.150,-34.681,4.938)
O5': (102.303,-37.340,7.844)
O3': (103.075,-33.877,9.113)
OP2: (102.523,-39.789,8.318)
C3': (102.550,-34.452,7.916)
C1': (102.400,-34.250,5.566)
C5': (103.616,-36.805,7.775)
O4': (103.152,-35.410,5.883)
C8: (100.685,-35.964,4.803)
O2': (103.191,-32.328,6.831)
C6: (98.164,-34.137,3.141)
C5: (99.245,-34.730,3.837)
C4: (100.226,-33.871,4.310)
P: (101.942,-38.820,7.349)
C4': (103.566,-35.378,7.265)
C2': (102.275,-33.411,6.831)
C2: (99.189,-32.071,3.513)
N1: (98.173,-32.787,3.000)
N3: (100.262,-32.523,4.172)
N6: (97.142,-34.836,2.633)
N7: (99.547,-36.041,4.161)
N9: (101.150,-34.681,4.938)
O5': (102.303,-37.340,7.844)
O3': (103.075,-33.877,9.113)
OP1: (89.414,-27.738,-4.953)
OP2: (91.222,-26.777,-3.420)
C3': (89.755,-31.582,-3.582)
C1': (91.617,-32.066,-2.251)
C5': (91.267,-30.207,-5.136)
O4': (92.118,-31.810,-3.553)
C8: (92.750,-30.455,-0.627)
O2': (89.478,-31.876,-1.146)
C6: (95.236,-32.341,1.000)
C5: (94.206,-31.718,0.267)
C4: (93.529,-32.507,-0.648)
P: (90.832,-27.670,-4.535)
C4': (91.012,-31.532,-4.447)
C2': (90.286,-31.331,-2.174)
C2: (94.741,-34.291,-0.154)
N1: (95.482,-33.652,0.762)
N3: (93.746,-33.812,-0.903)
N6: (95.966,-31.691,1.910)
N7: (93.707,-30.428,0.271)
N9: (92.588,-31.680,-1.224)
O5': (91.354,-29.145,-4.183)
O3': (89.129,-32.856,-3.664)
OP2: (91.222,-26.777,-3.420)
C3': (89.755,-31.582,-3.582)
C1': (91.617,-32.066,-2.251)
C5': (91.267,-30.207,-5.136)
O4': (92.118,-31.810,-3.553)
C8: (92.750,-30.455,-0.627)
O2': (89.478,-31.876,-1.146)
C6: (95.236,-32.341,1.000)
C5: (94.206,-31.718,0.267)
C4: (93.529,-32.507,-0.648)
P: (90.832,-27.670,-4.535)
C4': (91.012,-31.532,-4.447)
C2': (90.286,-31.331,-2.174)
C2: (94.741,-34.291,-0.154)
N1: (95.482,-33.652,0.762)
N3: (93.746,-33.812,-0.903)
N6: (95.966,-31.691,1.910)
N7: (93.707,-30.428,0.271)
N9: (92.588,-31.680,-1.224)
O5': (91.354,-29.145,-4.183)
O3': (89.129,-32.856,-3.664)
Image (generated by PyMOL):