Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2524:A2655
Extra
PDB:
ATOM 1 O3' A A2523 -99.217 -50.063 -54.902 1.00 0.01 O
ATOM 2 P A A2524 -100.085 -48.907 -55.614 1.00 2.10 P
ATOM 3 OP1 A A2524 -99.491 -47.620 -55.183 1.00 2.10 O
ATOM 4 OP2 A A2524 -101.522 -49.168 -55.325 1.00 2.10 O
ATOM 5 O5' A A2524 -99.801 -49.163 -57.156 1.00 2.10 O
ATOM 6 C5' A A2524 -100.288 -50.331 -57.785 1.00 2.10 C
ATOM 7 C4' A A2524 -99.464 -50.688 -58.976 1.00 2.10 C
ATOM 8 O4' A A2524 -99.643 -49.681 -59.996 1.00 2.10 O
ATOM 9 C3' A A2524 -97.976 -50.719 -58.735 1.00 2.10 C
ATOM 10 O3' A A2524 -97.547 -51.961 -58.237 1.00 2.10 O
ATOM 11 C2' A A2524 -97.414 -50.389 -60.104 1.00 2.10 C
ATOM 12 O2' A A2524 -97.509 -51.517 -60.960 1.00 2.10 O
ATOM 13 C1' A A2524 -98.406 -49.348 -60.579 1.00 2.10 C
ATOM 14 N9 A A2524 -98.033 -47.989 -60.137 1.00 2.36 N
ATOM 15 C8 A A2524 -98.742 -47.126 -59.327 1.00 2.36 C
ATOM 16 N7 A A2524 -98.150 -45.985 -59.096 1.00 2.36 N
ATOM 17 C5 A A2524 -96.977 -46.101 -59.814 1.00 2.36 C
ATOM 18 C6 A A2524 -95.888 -45.221 -59.980 1.00 2.36 C
ATOM 19 N6 A A2524 -95.801 -44.004 -59.424 1.00 2.36 N
ATOM 20 N1 A A2524 -94.871 -45.651 -60.767 1.00 2.36 N
ATOM 21 C2 A A2524 -94.961 -46.873 -61.334 1.00 2.36 C
ATOM 22 N3 A A2524 -95.921 -47.788 -61.232 1.00 2.36 N
ATOM 23 C4 A A2524 -96.899 -47.328 -60.453 1.00 2.36 C
ATOM 24 P G A2525 -96.118 -52.098 -57.556 1.00 0.13 P
ATOM 25 OP1 G A2525 -95.777 -53.515 -57.594 1.00 0.13 O
ATOM 26 OP2 G A2525 -96.190 -51.408 -56.268 1.00 0.13 O
ATOM 27 O5' G A2525 -95.167 -51.304 -58.527 1.00 0.13 O
TER
ATOM 1 O3' G B2654 -91.071 -38.158 -67.462 1.00 20.72 O
ATOM 2 P A B2655 -89.675 -38.297 -66.662 1.00 43.06 P
ATOM 3 OP1 A B2655 -88.657 -37.555 -67.416 1.00 43.06 O
ATOM 4 OP2 A B2655 -89.455 -39.736 -66.430 1.00 43.06 O
ATOM 5 O5' A B2655 -89.960 -37.553 -65.290 1.00 43.06 O
ATOM 6 C5' A B2655 -88.941 -36.806 -64.647 1.00 43.06 C
ATOM 7 C4' A B2655 -89.171 -36.724 -63.158 1.00 43.06 C
ATOM 8 O4' A B2655 -90.559 -37.043 -62.854 1.00 43.06 O
ATOM 9 C3' A B2655 -88.375 -37.702 -62.317 1.00 43.06 C
ATOM 10 O3' A B2655 -87.070 -37.251 -62.050 1.00 43.06 O
ATOM 11 C2' A B2655 -89.238 -37.860 -61.082 1.00 43.06 C
ATOM 12 O2' A B2655 -89.115 -36.727 -60.244 1.00 43.06 O
ATOM 13 C1' A B2655 -90.629 -37.853 -61.701 1.00 43.06 C
ATOM 14 N9 A B2655 -91.067 -39.208 -62.120 1.00 43.35 N
ATOM 15 C8 A B2655 -90.775 -39.810 -63.324 1.00 43.35 C
ATOM 16 N7 A B2655 -91.290 -41.005 -63.495 1.00 43.35 N
ATOM 17 C5 A B2655 -91.985 -41.217 -62.316 1.00 43.35 C
ATOM 18 C6 A B2655 -92.749 -42.312 -61.883 1.00 43.35 C
ATOM 19 N6 A B2655 -92.941 -43.414 -62.605 1.00 43.35 N
ATOM 20 N1 A B2655 -93.319 -42.225 -60.667 1.00 43.35 N
ATOM 21 C2 A B2655 -93.126 -41.108 -59.951 1.00 43.35 C
ATOM 22 N3 A B2655 -92.435 -40.009 -60.255 1.00 43.35 N
ATOM 23 C4 A B2655 -91.874 -40.123 -61.466 1.00 43.35 C
ATOM 24 P G B2656 -85.826 -38.048 -62.671 1.00 26.29 P
ATOM 25 OP1 G B2656 -84.589 -37.329 -62.249 1.00 26.29 O
ATOM 26 OP2 G B2656 -86.110 -38.231 -64.141 1.00 26.29 O
ATOM 27 O5' G B2656 -85.910 -39.440 -61.920 1.00 26.29 O
TER
ATOM 2 P A A2524 -100.085 -48.907 -55.614 1.00 2.10 P
ATOM 3 OP1 A A2524 -99.491 -47.620 -55.183 1.00 2.10 O
ATOM 4 OP2 A A2524 -101.522 -49.168 -55.325 1.00 2.10 O
ATOM 5 O5' A A2524 -99.801 -49.163 -57.156 1.00 2.10 O
ATOM 6 C5' A A2524 -100.288 -50.331 -57.785 1.00 2.10 C
ATOM 7 C4' A A2524 -99.464 -50.688 -58.976 1.00 2.10 C
ATOM 8 O4' A A2524 -99.643 -49.681 -59.996 1.00 2.10 O
ATOM 9 C3' A A2524 -97.976 -50.719 -58.735 1.00 2.10 C
ATOM 10 O3' A A2524 -97.547 -51.961 -58.237 1.00 2.10 O
ATOM 11 C2' A A2524 -97.414 -50.389 -60.104 1.00 2.10 C
ATOM 12 O2' A A2524 -97.509 -51.517 -60.960 1.00 2.10 O
ATOM 13 C1' A A2524 -98.406 -49.348 -60.579 1.00 2.10 C
ATOM 14 N9 A A2524 -98.033 -47.989 -60.137 1.00 2.36 N
ATOM 15 C8 A A2524 -98.742 -47.126 -59.327 1.00 2.36 C
ATOM 16 N7 A A2524 -98.150 -45.985 -59.096 1.00 2.36 N
ATOM 17 C5 A A2524 -96.977 -46.101 -59.814 1.00 2.36 C
ATOM 18 C6 A A2524 -95.888 -45.221 -59.980 1.00 2.36 C
ATOM 19 N6 A A2524 -95.801 -44.004 -59.424 1.00 2.36 N
ATOM 20 N1 A A2524 -94.871 -45.651 -60.767 1.00 2.36 N
ATOM 21 C2 A A2524 -94.961 -46.873 -61.334 1.00 2.36 C
ATOM 22 N3 A A2524 -95.921 -47.788 -61.232 1.00 2.36 N
ATOM 23 C4 A A2524 -96.899 -47.328 -60.453 1.00 2.36 C
ATOM 24 P G A2525 -96.118 -52.098 -57.556 1.00 0.13 P
ATOM 25 OP1 G A2525 -95.777 -53.515 -57.594 1.00 0.13 O
ATOM 26 OP2 G A2525 -96.190 -51.408 -56.268 1.00 0.13 O
ATOM 27 O5' G A2525 -95.167 -51.304 -58.527 1.00 0.13 O
TER
ATOM 1 O3' G B2654 -91.071 -38.158 -67.462 1.00 20.72 O
ATOM 2 P A B2655 -89.675 -38.297 -66.662 1.00 43.06 P
ATOM 3 OP1 A B2655 -88.657 -37.555 -67.416 1.00 43.06 O
ATOM 4 OP2 A B2655 -89.455 -39.736 -66.430 1.00 43.06 O
ATOM 5 O5' A B2655 -89.960 -37.553 -65.290 1.00 43.06 O
ATOM 6 C5' A B2655 -88.941 -36.806 -64.647 1.00 43.06 C
ATOM 7 C4' A B2655 -89.171 -36.724 -63.158 1.00 43.06 C
ATOM 8 O4' A B2655 -90.559 -37.043 -62.854 1.00 43.06 O
ATOM 9 C3' A B2655 -88.375 -37.702 -62.317 1.00 43.06 C
ATOM 10 O3' A B2655 -87.070 -37.251 -62.050 1.00 43.06 O
ATOM 11 C2' A B2655 -89.238 -37.860 -61.082 1.00 43.06 C
ATOM 12 O2' A B2655 -89.115 -36.727 -60.244 1.00 43.06 O
ATOM 13 C1' A B2655 -90.629 -37.853 -61.701 1.00 43.06 C
ATOM 14 N9 A B2655 -91.067 -39.208 -62.120 1.00 43.35 N
ATOM 15 C8 A B2655 -90.775 -39.810 -63.324 1.00 43.35 C
ATOM 16 N7 A B2655 -91.290 -41.005 -63.495 1.00 43.35 N
ATOM 17 C5 A B2655 -91.985 -41.217 -62.316 1.00 43.35 C
ATOM 18 C6 A B2655 -92.749 -42.312 -61.883 1.00 43.35 C
ATOM 19 N6 A B2655 -92.941 -43.414 -62.605 1.00 43.35 N
ATOM 20 N1 A B2655 -93.319 -42.225 -60.667 1.00 43.35 N
ATOM 21 C2 A B2655 -93.126 -41.108 -59.951 1.00 43.35 C
ATOM 22 N3 A B2655 -92.435 -40.009 -60.255 1.00 43.35 N
ATOM 23 C4 A B2655 -91.874 -40.123 -61.466 1.00 43.35 C
ATOM 24 P G B2656 -85.826 -38.048 -62.671 1.00 26.29 P
ATOM 25 OP1 G B2656 -84.589 -37.329 -62.249 1.00 26.29 O
ATOM 26 OP2 G B2656 -86.110 -38.231 -64.141 1.00 26.29 O
ATOM 27 O5' G B2656 -85.910 -39.440 -61.920 1.00 26.29 O
TER
Atoms:
OP1: (-99.491,-47.620,-55.183)
OP2: (-101.522,-49.168,-55.325)
C3': (-97.976,-50.719,-58.735)
C1': (-98.406,-49.348,-60.579)
C5': (-100.288,-50.331,-57.785)
O4': (-99.643,-49.681,-59.996)
C8: (-98.742,-47.126,-59.327)
O2': (-97.509,-51.517,-60.960)
C6: (-95.888,-45.221,-59.980)
C5: (-96.977,-46.101,-59.814)
C4: (-96.899,-47.328,-60.453)
P: (-100.085,-48.907,-55.614)
C4': (-99.464,-50.688,-58.976)
C2': (-97.414,-50.389,-60.104)
C2: (-94.961,-46.873,-61.334)
N1: (-94.871,-45.651,-60.767)
N3: (-95.921,-47.788,-61.232)
N6: (-95.801,-44.004,-59.424)
N7: (-98.150,-45.985,-59.096)
N9: (-98.033,-47.989,-60.137)
O5': (-99.801,-49.163,-57.156)
O3': (-97.547,-51.961,-58.237)
OP2: (-101.522,-49.168,-55.325)
C3': (-97.976,-50.719,-58.735)
C1': (-98.406,-49.348,-60.579)
C5': (-100.288,-50.331,-57.785)
O4': (-99.643,-49.681,-59.996)
C8: (-98.742,-47.126,-59.327)
O2': (-97.509,-51.517,-60.960)
C6: (-95.888,-45.221,-59.980)
C5: (-96.977,-46.101,-59.814)
C4: (-96.899,-47.328,-60.453)
P: (-100.085,-48.907,-55.614)
C4': (-99.464,-50.688,-58.976)
C2': (-97.414,-50.389,-60.104)
C2: (-94.961,-46.873,-61.334)
N1: (-94.871,-45.651,-60.767)
N3: (-95.921,-47.788,-61.232)
N6: (-95.801,-44.004,-59.424)
N7: (-98.150,-45.985,-59.096)
N9: (-98.033,-47.989,-60.137)
O5': (-99.801,-49.163,-57.156)
O3': (-97.547,-51.961,-58.237)
OP1: (-88.657,-37.555,-67.416)
OP2: (-89.455,-39.736,-66.430)
C3': (-88.375,-37.702,-62.317)
C1': (-90.629,-37.853,-61.701)
C5': (-88.941,-36.806,-64.647)
O4': (-90.559,-37.043,-62.854)
C8: (-90.775,-39.810,-63.324)
O2': (-89.115,-36.727,-60.244)
C6: (-92.749,-42.312,-61.883)
C5: (-91.985,-41.217,-62.316)
C4: (-91.874,-40.123,-61.466)
P: (-89.675,-38.297,-66.662)
C4': (-89.171,-36.724,-63.158)
C2': (-89.238,-37.860,-61.082)
C2: (-93.126,-41.108,-59.951)
N1: (-93.319,-42.225,-60.667)
N3: (-92.435,-40.009,-60.255)
N6: (-92.941,-43.414,-62.605)
N7: (-91.290,-41.005,-63.495)
N9: (-91.067,-39.208,-62.120)
O5': (-89.960,-37.553,-65.290)
O3': (-87.070,-37.251,-62.050)
OP2: (-89.455,-39.736,-66.430)
C3': (-88.375,-37.702,-62.317)
C1': (-90.629,-37.853,-61.701)
C5': (-88.941,-36.806,-64.647)
O4': (-90.559,-37.043,-62.854)
C8: (-90.775,-39.810,-63.324)
O2': (-89.115,-36.727,-60.244)
C6: (-92.749,-42.312,-61.883)
C5: (-91.985,-41.217,-62.316)
C4: (-91.874,-40.123,-61.466)
P: (-89.675,-38.297,-66.662)
C4': (-89.171,-36.724,-63.158)
C2': (-89.238,-37.860,-61.082)
C2: (-93.126,-41.108,-59.951)
N1: (-93.319,-42.225,-60.667)
N3: (-92.435,-40.009,-60.255)
N6: (-92.941,-43.414,-62.605)
N7: (-91.290,-41.005,-63.495)
N9: (-91.067,-39.208,-62.120)
O5': (-89.960,-37.553,-65.290)
O3': (-87.070,-37.251,-62.050)
Image (generated by PyMOL):