ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01365:01366

Extra

PDB:
ATOM 1 O3' U A1364 84.590 173.307 85.889 1.00 48.17 O
ATOM 2 P A A1365 85.739 172.201 86.068 1.00 48.86 P
ATOM 3 OP1 A A1365 85.343 171.271 87.156 1.00 51.74 O
ATOM 4 OP2 A A1365 87.024 172.912 86.145 1.00 50.00 O
ATOM 5 O5' A A1365 85.747 171.406 84.686 1.00 50.97 O
ATOM 6 C5' A A1365 84.526 170.958 84.094 1.00 51.35 C
ATOM 7 C4' A A1365 84.749 169.689 83.312 1.00 51.63 C
ATOM 8 O4' A A1365 85.337 169.986 82.024 1.00 51.44 O
ATOM 9 C3' A A1365 85.619 168.628 83.966 1.00 52.10 C
ATOM 10 O3' A A1365 85.040 167.358 83.739 1.00 52.80 O
ATOM 11 C2' A A1365 86.962 168.804 83.266 1.00 52.60 C
ATOM 12 O2' A A1365 87.737 167.623 83.178 1.00 48.83 O
ATOM 13 C1' A A1365 86.549 169.276 81.872 1.00 53.11 C
ATOM 14 N9 A A1365 87.538 170.213 81.333 1.00 56.82 N
ATOM 15 C8 A A1365 88.017 171.363 81.935 1.00 56.91 C
ATOM 16 N7 A A1365 88.916 172.000 81.223 1.00 57.37 N
ATOM 17 C5 A A1365 89.036 171.226 80.078 1.00 58.94 C
ATOM 18 C6 A A1365 89.834 171.362 78.938 1.00 60.18 C
ATOM 19 N6 A A1365 90.691 172.363 78.760 1.00 59.93 N
ATOM 20 N1 A A1365 89.721 170.419 77.975 1.00 62.55 N
ATOM 21 C2 A A1365 88.852 169.408 78.166 1.00 60.26 C
ATOM 22 N3 A A1365 88.046 169.173 79.198 1.00 56.29 N
ATOM 23 C4 A A1365 88.189 170.126 80.130 1.00 56.40 C
ATOM 24 P A A1366 83.949 166.802 84.779 1.00 55.10 P
ATOM 25 OP1 A A1366 84.456 166.981 86.161 1.00 53.87 O
ATOM 26 OP2 A A1366 83.530 165.449 84.320 1.00 58.31 O
ATOM 27 O5' A A1366 82.716 167.794 84.594 1.00 52.81 O
TER

ATOM 1 O3' A B1365 85.040 167.358 83.739 1.00 52.80 O
ATOM 2 P A B1366 83.949 166.802 84.779 1.00 55.10 P
ATOM 3 OP1 A B1366 84.456 166.981 86.161 1.00 53.87 O
ATOM 4 OP2 A B1366 83.530 165.449 84.320 1.00 58.31 O
ATOM 5 O5' A B1366 82.716 167.794 84.594 1.00 52.81 O
ATOM 6 C5' A B1366 81.995 167.827 83.358 1.00 47.98 C
ATOM 7 C4' A B1366 80.779 168.703 83.488 1.00 48.23 C
ATOM 8 O4' A B1366 81.181 170.108 83.610 1.00 48.16 O
ATOM 9 C3' A B1366 79.854 168.645 82.272 1.00 47.28 C
ATOM 10 O3' A B1366 78.511 168.877 82.699 1.00 48.86 O
ATOM 11 C2' A B1366 80.289 169.874 81.488 1.00 46.70 C
ATOM 12 O2' A B1366 79.306 170.345 80.598 1.00 47.83 O
ATOM 13 C1' A B1366 80.485 170.859 82.635 1.00 47.21 C
ATOM 14 N9 A B1366 81.223 172.073 82.297 1.00 47.86 N
ATOM 15 C8 A B1366 82.433 172.195 81.664 1.00 47.17 C
ATOM 16 N7 A B1366 82.793 173.437 81.454 1.00 46.47 N
ATOM 17 C5 A B1366 81.759 174.184 81.999 1.00 45.70 C
ATOM 18 C6 A B1366 81.546 175.566 82.100 1.00 46.60 C
ATOM 19 N6 A B1366 82.388 176.483 81.618 1.00 44.46 N
ATOM 20 N1 A B1366 80.421 175.983 82.717 1.00 47.39 N
ATOM 21 C2 A B1366 79.574 175.064 83.192 1.00 47.78 C
ATOM 22 N3 A B1366 79.662 173.740 83.151 1.00 46.66 N
ATOM 23 C4 A B1366 80.792 173.358 82.533 1.00 46.69 C
ATOM 24 P U B1367 77.494 167.653 82.900 1.00 43.09 P
ATOM 25 OP1 U B1367 77.526 167.295 84.333 1.00 43.32 O
ATOM 26 OP2 U B1367 77.798 166.616 81.884 1.00 45.40 O
ATOM 27 O5' U B1367 76.087 168.333 82.591 1.00 41.82 O
TER

Atoms:
OP1: (85.343,171.271,87.156)
OP2: (87.024,172.912,86.145)
C3': (85.619,168.628,83.966)
C1': (86.549,169.276,81.872)
C5': (84.526,170.958,84.094)
O4': (85.337,169.986,82.024)
C8: (88.017,171.363,81.935)
O2': (87.737,167.623,83.178)
C6: (89.834,171.362,78.938)
C5: (89.036,171.226,80.078)
C4: (88.189,170.126,80.130)
P: (85.739,172.201,86.068)
C4': (84.749,169.689,83.312)
C2': (86.962,168.804,83.266)
C2: (88.852,169.408,78.166)
N1: (89.721,170.419,77.975)
N3: (88.046,169.173,79.198)
N6: (90.691,172.363,78.760)
N7: (88.916,172.000,81.223)
N9: (87.538,170.213,81.333)
O5': (85.747,171.406,84.686)
O3': (85.040,167.358,83.739)
OP1: (84.456,166.981,86.161)
OP2: (83.530,165.449,84.320)
C3': (79.854,168.645,82.272)
C1': (80.485,170.859,82.635)
C5': (81.995,167.827,83.358)
O4': (81.181,170.108,83.610)
C8: (82.433,172.195,81.664)
O2': (79.306,170.345,80.598)
C6: (81.546,175.566,82.100)
C5: (81.759,174.184,81.999)
C4: (80.792,173.358,82.533)
P: (83.949,166.802,84.779)
C4': (80.779,168.703,83.488)
C2': (80.289,169.874,81.488)
C2: (79.574,175.064,83.192)
N1: (80.421,175.983,82.717)
N3: (79.662,173.740,83.151)
N6: (82.388,176.483,81.618)
N7: (82.793,173.437,81.454)
N9: (81.223,172.073,82.297)
O5': (82.716,167.794,84.594)
O3': (78.511,168.877,82.699)
Image (generated by PyMOL):
PyMOL image
show in jmol