Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01887:01888
Extra
PDB:
ATOM 1 O3' C A1886 118.371 89.301 50.676 1.00 78.68 O
ATOM 2 P G A1887 118.788 89.564 52.211 1.00 81.49 P
ATOM 3 OP1 G A1887 120.145 90.174 52.195 1.00 80.44 O
ATOM 4 OP2 G A1887 118.551 88.323 52.994 1.00 80.79 O
ATOM 5 O5' G A1887 117.751 90.669 52.714 1.00 82.72 O
ATOM 6 C5' G A1887 117.587 91.896 51.985 1.00 82.26 C
ATOM 7 C4' G A1887 116.303 92.590 52.375 1.00 81.95 C
ATOM 8 O4' G A1887 115.185 91.677 52.258 1.00 83.80 O
ATOM 9 C3' G A1887 116.149 93.056 53.812 1.00 80.89 C
ATOM 10 O3' G A1887 116.915 94.246 54.033 1.00 75.96 O
ATOM 11 C2' G A1887 114.643 93.327 53.878 1.00 84.14 C
ATOM 12 O2' G A1887 114.286 94.579 53.321 1.00 85.35 O
ATOM 13 C1' G A1887 114.086 92.239 52.952 1.00 86.09 C
ATOM 14 N9 G A1887 113.299 91.186 53.596 1.00 88.84 N
ATOM 15 C8 G A1887 111.943 91.224 53.837 1.00 89.43 C
ATOM 16 N7 G A1887 111.490 90.142 54.409 1.00 89.75 N
ATOM 17 C5 G A1887 112.610 89.339 54.558 1.00 91.02 C
ATOM 18 C6 G A1887 112.735 88.042 55.111 1.00 92.14 C
ATOM 19 O6 G A1887 111.851 87.317 55.584 1.00 92.40 O
ATOM 20 N1 G A1887 114.054 87.600 55.078 1.00 93.82 N
ATOM 21 C2 G A1887 115.118 88.315 54.576 1.00 94.14 C
ATOM 22 N2 G A1887 116.321 87.717 54.652 1.00 95.22 N
ATOM 23 N3 G A1887 115.012 89.525 54.046 1.00 91.99 N
ATOM 24 C4 G A1887 113.739 89.972 54.070 1.00 90.34 C
ATOM 25 P A A1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 26 OP1 A A1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 27 OP2 A A1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 28 O5' A A1888 115.659 96.261 54.879 1.00 69.42 O
TER
ATOM 1 O3' G B1887 116.915 94.246 54.033 1.00 75.96 O
ATOM 2 P A B1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 3 OP1 A B1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 4 OP2 A B1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 5 O5' A B1888 115.659 96.261 54.879 1.00 69.42 O
ATOM 6 C5' A B1888 116.083 97.280 53.951 1.00 64.33 C
ATOM 7 C4' A B1888 115.173 98.486 54.023 1.00 60.58 C
ATOM 8 O4' A B1888 113.916 98.220 53.354 1.00 60.58 O
ATOM 9 C3' A B1888 114.762 98.950 55.406 1.00 59.38 C
ATOM 10 O3' A B1888 115.797 99.704 56.018 1.00 57.86 O
ATOM 11 C2' A B1888 113.526 99.786 55.098 1.00 59.09 C
ATOM 12 O2' A B1888 113.846 101.061 54.582 1.00 60.75 O
ATOM 13 C1' A B1888 112.885 98.969 53.975 1.00 59.78 C
ATOM 14 N9 A B1888 111.854 98.044 54.441 1.00 60.21 N
ATOM 15 C8 A B1888 111.984 96.716 54.770 1.00 60.93 C
ATOM 16 N7 A B1888 110.862 96.153 55.153 1.00 61.34 N
ATOM 17 C5 A B1888 109.932 97.179 55.074 1.00 60.52 C
ATOM 18 C6 A B1888 108.558 97.231 55.348 1.00 60.15 C
ATOM 19 N6 A B1888 107.849 96.188 55.789 1.00 59.20 N
ATOM 20 N1 A B1888 107.927 98.408 55.158 1.00 60.63 N
ATOM 21 C2 A B1888 108.638 99.457 54.728 1.00 59.81 C
ATOM 22 N3 A B1888 109.929 99.536 54.442 1.00 60.02 N
ATOM 23 C4 A B1888 110.529 98.349 54.637 1.00 60.55 C
ATOM 24 P A B1889 115.997 99.639 57.611 1.00 58.34 P
ATOM 25 OP1 A B1889 117.313 100.266 57.914 1.00 57.51 O
ATOM 26 OP2 A B1889 115.720 98.257 58.079 1.00 57.38 O
ATOM 27 O5' A B1889 114.838 100.576 58.175 1.00 57.04 O
TER
ATOM 2 P G A1887 118.788 89.564 52.211 1.00 81.49 P
ATOM 3 OP1 G A1887 120.145 90.174 52.195 1.00 80.44 O
ATOM 4 OP2 G A1887 118.551 88.323 52.994 1.00 80.79 O
ATOM 5 O5' G A1887 117.751 90.669 52.714 1.00 82.72 O
ATOM 6 C5' G A1887 117.587 91.896 51.985 1.00 82.26 C
ATOM 7 C4' G A1887 116.303 92.590 52.375 1.00 81.95 C
ATOM 8 O4' G A1887 115.185 91.677 52.258 1.00 83.80 O
ATOM 9 C3' G A1887 116.149 93.056 53.812 1.00 80.89 C
ATOM 10 O3' G A1887 116.915 94.246 54.033 1.00 75.96 O
ATOM 11 C2' G A1887 114.643 93.327 53.878 1.00 84.14 C
ATOM 12 O2' G A1887 114.286 94.579 53.321 1.00 85.35 O
ATOM 13 C1' G A1887 114.086 92.239 52.952 1.00 86.09 C
ATOM 14 N9 G A1887 113.299 91.186 53.596 1.00 88.84 N
ATOM 15 C8 G A1887 111.943 91.224 53.837 1.00 89.43 C
ATOM 16 N7 G A1887 111.490 90.142 54.409 1.00 89.75 N
ATOM 17 C5 G A1887 112.610 89.339 54.558 1.00 91.02 C
ATOM 18 C6 G A1887 112.735 88.042 55.111 1.00 92.14 C
ATOM 19 O6 G A1887 111.851 87.317 55.584 1.00 92.40 O
ATOM 20 N1 G A1887 114.054 87.600 55.078 1.00 93.82 N
ATOM 21 C2 G A1887 115.118 88.315 54.576 1.00 94.14 C
ATOM 22 N2 G A1887 116.321 87.717 54.652 1.00 95.22 N
ATOM 23 N3 G A1887 115.012 89.525 54.046 1.00 91.99 N
ATOM 24 C4 G A1887 113.739 89.972 54.070 1.00 90.34 C
ATOM 25 P A A1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 26 OP1 A A1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 27 OP2 A A1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 28 O5' A A1888 115.659 96.261 54.879 1.00 69.42 O
TER
ATOM 1 O3' G B1887 116.915 94.246 54.033 1.00 75.96 O
ATOM 2 P A B1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 3 OP1 A B1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 4 OP2 A B1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 5 O5' A B1888 115.659 96.261 54.879 1.00 69.42 O
ATOM 6 C5' A B1888 116.083 97.280 53.951 1.00 64.33 C
ATOM 7 C4' A B1888 115.173 98.486 54.023 1.00 60.58 C
ATOM 8 O4' A B1888 113.916 98.220 53.354 1.00 60.58 O
ATOM 9 C3' A B1888 114.762 98.950 55.406 1.00 59.38 C
ATOM 10 O3' A B1888 115.797 99.704 56.018 1.00 57.86 O
ATOM 11 C2' A B1888 113.526 99.786 55.098 1.00 59.09 C
ATOM 12 O2' A B1888 113.846 101.061 54.582 1.00 60.75 O
ATOM 13 C1' A B1888 112.885 98.969 53.975 1.00 59.78 C
ATOM 14 N9 A B1888 111.854 98.044 54.441 1.00 60.21 N
ATOM 15 C8 A B1888 111.984 96.716 54.770 1.00 60.93 C
ATOM 16 N7 A B1888 110.862 96.153 55.153 1.00 61.34 N
ATOM 17 C5 A B1888 109.932 97.179 55.074 1.00 60.52 C
ATOM 18 C6 A B1888 108.558 97.231 55.348 1.00 60.15 C
ATOM 19 N6 A B1888 107.849 96.188 55.789 1.00 59.20 N
ATOM 20 N1 A B1888 107.927 98.408 55.158 1.00 60.63 N
ATOM 21 C2 A B1888 108.638 99.457 54.728 1.00 59.81 C
ATOM 22 N3 A B1888 109.929 99.536 54.442 1.00 60.02 N
ATOM 23 C4 A B1888 110.529 98.349 54.637 1.00 60.55 C
ATOM 24 P A B1889 115.997 99.639 57.611 1.00 58.34 P
ATOM 25 OP1 A B1889 117.313 100.266 57.914 1.00 57.51 O
ATOM 26 OP2 A B1889 115.720 98.257 58.079 1.00 57.38 O
ATOM 27 O5' A B1889 114.838 100.576 58.175 1.00 57.04 O
TER
Atoms:
OP1: (120.145,90.174,52.195)
OP2: (118.551,88.323,52.994)
C3': (116.149,93.056,53.812)
C1': (114.086,92.239,52.952)
C5': (117.587,91.896,51.985)
O6: (111.851,87.317,55.584)
O4': (115.185,91.677,52.258)
C8: (111.943,91.224,53.837)
C2: (115.118,88.315,54.576)
C6: (112.735,88.042,55.111)
C5: (112.610,89.339,54.558)
C4: (113.739,89.972,54.070)
P: (118.788,89.564,52.211)
C4': (116.303,92.590,52.375)
C2': (114.643,93.327,53.878)
O2': (114.286,94.579,53.321)
N1: (114.054,87.600,55.078)
N2: (116.321,87.717,54.652)
N3: (115.012,89.525,54.046)
N7: (111.490,90.142,54.409)
N9: (113.299,91.186,53.596)
O5': (117.751,90.669,52.714)
O3': (116.915,94.246,54.033)
OP2: (118.551,88.323,52.994)
C3': (116.149,93.056,53.812)
C1': (114.086,92.239,52.952)
C5': (117.587,91.896,51.985)
O6: (111.851,87.317,55.584)
O4': (115.185,91.677,52.258)
C8: (111.943,91.224,53.837)
C2: (115.118,88.315,54.576)
C6: (112.735,88.042,55.111)
C5: (112.610,89.339,54.558)
C4: (113.739,89.972,54.070)
P: (118.788,89.564,52.211)
C4': (116.303,92.590,52.375)
C2': (114.643,93.327,53.878)
O2': (114.286,94.579,53.321)
N1: (114.054,87.600,55.078)
N2: (116.321,87.717,54.652)
N3: (115.012,89.525,54.046)
N7: (111.490,90.142,54.409)
N9: (113.299,91.186,53.596)
O5': (117.751,90.669,52.714)
O3': (116.915,94.246,54.033)
OP1: (117.965,95.809,55.679)
OP2: (116.018,94.308,56.396)
C3': (114.762,98.950,55.406)
C1': (112.885,98.969,53.975)
C5': (116.083,97.280,53.951)
O4': (113.916,98.220,53.354)
C8: (111.984,96.716,54.770)
O2': (113.846,101.061,54.582)
C6: (108.558,97.231,55.348)
C5: (109.932,97.179,55.074)
C4: (110.529,98.349,54.637)
P: (116.679,95.135,55.360)
C4': (115.173,98.486,54.023)
C2': (113.526,99.786,55.098)
C2: (108.638,99.457,54.728)
N1: (107.927,98.408,55.158)
N3: (109.929,99.536,54.442)
N6: (107.849,96.188,55.789)
N7: (110.862,96.153,55.153)
N9: (111.854,98.044,54.441)
O5': (115.659,96.261,54.879)
O3': (115.797,99.704,56.018)
OP2: (116.018,94.308,56.396)
C3': (114.762,98.950,55.406)
C1': (112.885,98.969,53.975)
C5': (116.083,97.280,53.951)
O4': (113.916,98.220,53.354)
C8: (111.984,96.716,54.770)
O2': (113.846,101.061,54.582)
C6: (108.558,97.231,55.348)
C5: (109.932,97.179,55.074)
C4: (110.529,98.349,54.637)
P: (116.679,95.135,55.360)
C4': (115.173,98.486,54.023)
C2': (113.526,99.786,55.098)
C2: (108.638,99.457,54.728)
N1: (107.927,98.408,55.158)
N3: (109.929,99.536,54.442)
N6: (107.849,96.188,55.789)
N7: (110.862,96.153,55.153)
N9: (111.854,98.044,54.441)
O5': (115.659,96.261,54.879)
O3': (115.797,99.704,56.018)
Image (generated by PyMOL):