Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01887:01888
Extra
PDB:
ATOM 1 O3' C A1886 118.647 89.393 51.024 1.00 85.53 O
ATOM 2 P G A1887 119.114 89.599 52.554 1.00 88.77 P
ATOM 3 OP1 G A1887 120.499 90.143 52.506 1.00 88.34 O
ATOM 4 OP2 G A1887 118.837 88.351 53.322 1.00 87.99 O
ATOM 5 O5' G A1887 118.156 90.748 53.107 1.00 89.13 O
ATOM 6 C5' G A1887 118.099 92.008 52.440 1.00 89.27 C
ATOM 7 C4' G A1887 116.829 92.745 52.776 1.00 90.00 C
ATOM 8 O4' G A1887 115.667 91.888 52.619 1.00 90.92 O
ATOM 9 C3' G A1887 116.610 93.226 54.197 1.00 89.93 C
ATOM 10 O3' G A1887 117.436 94.349 54.509 1.00 87.92 O
ATOM 11 C2' G A1887 115.138 93.638 54.121 1.00 92.10 C
ATOM 12 O2' G A1887 114.961 94.895 53.489 1.00 91.80 O
ATOM 13 C1' G A1887 114.560 92.561 53.195 1.00 92.38 C
ATOM 14 N9 G A1887 113.653 91.622 53.858 1.00 93.78 N
ATOM 15 C8 G A1887 112.333 91.875 54.163 1.00 94.32 C
ATOM 16 N7 G A1887 111.742 90.884 54.768 1.00 94.33 N
ATOM 17 C5 G A1887 112.723 89.911 54.868 1.00 95.34 C
ATOM 18 C6 G A1887 112.663 88.619 55.430 1.00 95.81 C
ATOM 19 O6 G A1887 111.702 88.060 55.965 1.00 96.77 O
ATOM 20 N1 G A1887 113.881 87.961 55.327 1.00 96.94 N
ATOM 21 C2 G A1887 115.015 88.483 54.754 1.00 97.63 C
ATOM 22 N2 G A1887 116.100 87.688 54.760 1.00 99.45 N
ATOM 23 N3 G A1887 115.085 89.693 54.217 1.00 96.35 N
ATOM 24 C4 G A1887 113.911 90.348 54.309 1.00 94.83 C
ATOM 25 P A A1888 117.161 95.210 55.849 1.00 87.31 P
ATOM 26 OP1 A A1888 118.432 95.904 56.201 1.00 87.35 O
ATOM 27 OP2 A A1888 116.514 94.334 56.858 1.00 86.90 O
ATOM 28 O5' A A1888 116.111 96.323 55.380 1.00 83.84 O
TER
ATOM 1 O3' G B1887 117.436 94.349 54.509 1.00 87.92 O
ATOM 2 P A B1888 117.161 95.210 55.849 1.00 87.31 P
ATOM 3 OP1 A B1888 118.432 95.904 56.201 1.00 87.35 O
ATOM 4 OP2 A B1888 116.514 94.334 56.858 1.00 86.90 O
ATOM 5 O5' A B1888 116.111 96.323 55.380 1.00 83.84 O
ATOM 6 C5' A B1888 116.502 97.356 54.439 1.00 79.27 C
ATOM 7 C4' A B1888 115.555 98.544 54.492 1.00 75.24 C
ATOM 8 O4' A B1888 114.319 98.259 53.791 1.00 75.02 O
ATOM 9 C3' A B1888 115.108 99.043 55.857 1.00 72.30 C
ATOM 10 O3' A B1888 116.112 99.843 56.462 1.00 69.69 O
ATOM 11 C2' A B1888 113.863 99.850 55.503 1.00 72.59 C
ATOM 12 O2' A B1888 114.158 101.125 54.969 1.00 71.98 O
ATOM 13 C1' A B1888 113.260 99.001 54.382 1.00 73.74 C
ATOM 14 N9 A B1888 112.233 98.066 54.846 1.00 73.79 N
ATOM 15 C8 A B1888 112.374 96.742 55.198 1.00 74.46 C
ATOM 16 N7 A B1888 111.254 96.173 55.578 1.00 74.34 N
ATOM 17 C5 A B1888 110.314 97.190 55.473 1.00 73.10 C
ATOM 18 C6 A B1888 108.938 97.233 55.738 1.00 71.78 C
ATOM 19 N6 A B1888 108.239 96.197 56.201 1.00 70.89 N
ATOM 20 N1 A B1888 108.295 98.397 55.517 1.00 72.72 N
ATOM 21 C2 A B1888 108.996 99.445 55.071 1.00 73.17 C
ATOM 22 N3 A B1888 110.292 99.533 54.794 1.00 73.59 N
ATOM 23 C4 A B1888 110.903 98.358 55.018 1.00 73.38 C
ATOM 24 P A B1889 116.342 99.773 58.051 1.00 69.38 P
ATOM 25 OP1 A B1889 117.679 100.364 58.336 1.00 68.44 O
ATOM 26 OP2 A B1889 116.036 98.399 58.525 1.00 69.16 O
ATOM 27 O5' A B1889 115.223 100.742 58.638 1.00 68.28 O
TER
ATOM 2 P G A1887 119.114 89.599 52.554 1.00 88.77 P
ATOM 3 OP1 G A1887 120.499 90.143 52.506 1.00 88.34 O
ATOM 4 OP2 G A1887 118.837 88.351 53.322 1.00 87.99 O
ATOM 5 O5' G A1887 118.156 90.748 53.107 1.00 89.13 O
ATOM 6 C5' G A1887 118.099 92.008 52.440 1.00 89.27 C
ATOM 7 C4' G A1887 116.829 92.745 52.776 1.00 90.00 C
ATOM 8 O4' G A1887 115.667 91.888 52.619 1.00 90.92 O
ATOM 9 C3' G A1887 116.610 93.226 54.197 1.00 89.93 C
ATOM 10 O3' G A1887 117.436 94.349 54.509 1.00 87.92 O
ATOM 11 C2' G A1887 115.138 93.638 54.121 1.00 92.10 C
ATOM 12 O2' G A1887 114.961 94.895 53.489 1.00 91.80 O
ATOM 13 C1' G A1887 114.560 92.561 53.195 1.00 92.38 C
ATOM 14 N9 G A1887 113.653 91.622 53.858 1.00 93.78 N
ATOM 15 C8 G A1887 112.333 91.875 54.163 1.00 94.32 C
ATOM 16 N7 G A1887 111.742 90.884 54.768 1.00 94.33 N
ATOM 17 C5 G A1887 112.723 89.911 54.868 1.00 95.34 C
ATOM 18 C6 G A1887 112.663 88.619 55.430 1.00 95.81 C
ATOM 19 O6 G A1887 111.702 88.060 55.965 1.00 96.77 O
ATOM 20 N1 G A1887 113.881 87.961 55.327 1.00 96.94 N
ATOM 21 C2 G A1887 115.015 88.483 54.754 1.00 97.63 C
ATOM 22 N2 G A1887 116.100 87.688 54.760 1.00 99.45 N
ATOM 23 N3 G A1887 115.085 89.693 54.217 1.00 96.35 N
ATOM 24 C4 G A1887 113.911 90.348 54.309 1.00 94.83 C
ATOM 25 P A A1888 117.161 95.210 55.849 1.00 87.31 P
ATOM 26 OP1 A A1888 118.432 95.904 56.201 1.00 87.35 O
ATOM 27 OP2 A A1888 116.514 94.334 56.858 1.00 86.90 O
ATOM 28 O5' A A1888 116.111 96.323 55.380 1.00 83.84 O
TER
ATOM 1 O3' G B1887 117.436 94.349 54.509 1.00 87.92 O
ATOM 2 P A B1888 117.161 95.210 55.849 1.00 87.31 P
ATOM 3 OP1 A B1888 118.432 95.904 56.201 1.00 87.35 O
ATOM 4 OP2 A B1888 116.514 94.334 56.858 1.00 86.90 O
ATOM 5 O5' A B1888 116.111 96.323 55.380 1.00 83.84 O
ATOM 6 C5' A B1888 116.502 97.356 54.439 1.00 79.27 C
ATOM 7 C4' A B1888 115.555 98.544 54.492 1.00 75.24 C
ATOM 8 O4' A B1888 114.319 98.259 53.791 1.00 75.02 O
ATOM 9 C3' A B1888 115.108 99.043 55.857 1.00 72.30 C
ATOM 10 O3' A B1888 116.112 99.843 56.462 1.00 69.69 O
ATOM 11 C2' A B1888 113.863 99.850 55.503 1.00 72.59 C
ATOM 12 O2' A B1888 114.158 101.125 54.969 1.00 71.98 O
ATOM 13 C1' A B1888 113.260 99.001 54.382 1.00 73.74 C
ATOM 14 N9 A B1888 112.233 98.066 54.846 1.00 73.79 N
ATOM 15 C8 A B1888 112.374 96.742 55.198 1.00 74.46 C
ATOM 16 N7 A B1888 111.254 96.173 55.578 1.00 74.34 N
ATOM 17 C5 A B1888 110.314 97.190 55.473 1.00 73.10 C
ATOM 18 C6 A B1888 108.938 97.233 55.738 1.00 71.78 C
ATOM 19 N6 A B1888 108.239 96.197 56.201 1.00 70.89 N
ATOM 20 N1 A B1888 108.295 98.397 55.517 1.00 72.72 N
ATOM 21 C2 A B1888 108.996 99.445 55.071 1.00 73.17 C
ATOM 22 N3 A B1888 110.292 99.533 54.794 1.00 73.59 N
ATOM 23 C4 A B1888 110.903 98.358 55.018 1.00 73.38 C
ATOM 24 P A B1889 116.342 99.773 58.051 1.00 69.38 P
ATOM 25 OP1 A B1889 117.679 100.364 58.336 1.00 68.44 O
ATOM 26 OP2 A B1889 116.036 98.399 58.525 1.00 69.16 O
ATOM 27 O5' A B1889 115.223 100.742 58.638 1.00 68.28 O
TER
Atoms:
OP1: (120.499,90.143,52.506)
OP2: (118.837,88.351,53.322)
C3': (116.610,93.226,54.197)
C1': (114.560,92.561,53.195)
C5': (118.099,92.008,52.440)
O6: (111.702,88.060,55.965)
O4': (115.667,91.888,52.619)
C8: (112.333,91.875,54.163)
C2: (115.015,88.483,54.754)
C6: (112.663,88.619,55.430)
C5: (112.723,89.911,54.868)
C4: (113.911,90.348,54.309)
P: (119.114,89.599,52.554)
C4': (116.829,92.745,52.776)
C2': (115.138,93.638,54.121)
O2': (114.961,94.895,53.489)
N1: (113.881,87.961,55.327)
N2: (116.100,87.688,54.760)
N3: (115.085,89.693,54.217)
N7: (111.742,90.884,54.768)
N9: (113.653,91.622,53.858)
O5': (118.156,90.748,53.107)
O3': (117.436,94.349,54.509)
OP2: (118.837,88.351,53.322)
C3': (116.610,93.226,54.197)
C1': (114.560,92.561,53.195)
C5': (118.099,92.008,52.440)
O6: (111.702,88.060,55.965)
O4': (115.667,91.888,52.619)
C8: (112.333,91.875,54.163)
C2: (115.015,88.483,54.754)
C6: (112.663,88.619,55.430)
C5: (112.723,89.911,54.868)
C4: (113.911,90.348,54.309)
P: (119.114,89.599,52.554)
C4': (116.829,92.745,52.776)
C2': (115.138,93.638,54.121)
O2': (114.961,94.895,53.489)
N1: (113.881,87.961,55.327)
N2: (116.100,87.688,54.760)
N3: (115.085,89.693,54.217)
N7: (111.742,90.884,54.768)
N9: (113.653,91.622,53.858)
O5': (118.156,90.748,53.107)
O3': (117.436,94.349,54.509)
OP1: (118.432,95.904,56.201)
OP2: (116.514,94.334,56.858)
C3': (115.108,99.043,55.857)
C1': (113.260,99.001,54.382)
C5': (116.502,97.356,54.439)
O4': (114.319,98.259,53.791)
C8: (112.374,96.742,55.198)
O2': (114.158,101.125,54.969)
C6: (108.938,97.233,55.738)
C5: (110.314,97.190,55.473)
C4: (110.903,98.358,55.018)
P: (117.161,95.210,55.849)
C4': (115.555,98.544,54.492)
C2': (113.863,99.850,55.503)
C2: (108.996,99.445,55.071)
N1: (108.295,98.397,55.517)
N3: (110.292,99.533,54.794)
N6: (108.239,96.197,56.201)
N7: (111.254,96.173,55.578)
N9: (112.233,98.066,54.846)
O5': (116.111,96.323,55.380)
O3': (116.112,99.843,56.462)
OP2: (116.514,94.334,56.858)
C3': (115.108,99.043,55.857)
C1': (113.260,99.001,54.382)
C5': (116.502,97.356,54.439)
O4': (114.319,98.259,53.791)
C8: (112.374,96.742,55.198)
O2': (114.158,101.125,54.969)
C6: (108.938,97.233,55.738)
C5: (110.314,97.190,55.473)
C4: (110.903,98.358,55.018)
P: (117.161,95.210,55.849)
C4': (115.555,98.544,54.492)
C2': (113.863,99.850,55.503)
C2: (108.996,99.445,55.071)
N1: (108.295,98.397,55.517)
N3: (110.292,99.533,54.794)
N6: (108.239,96.197,56.201)
N7: (111.254,96.173,55.578)
N9: (112.233,98.066,54.846)
O5': (116.111,96.323,55.380)
O3': (116.112,99.843,56.462)
Image (generated by PyMOL):