Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5E:A7:A37
Extra
PDB:
ATOM 1 O3' G A 6 -5.464 13.489 -13.168 1.00 42.07 O
ATOM 2 P A A 7 -4.072 12.745 -12.908 1.00 42.76 P
ATOM 3 OP1 A A 7 -3.412 13.276 -11.691 1.00 42.17 O
ATOM 4 OP2 A A 7 -3.371 12.726 -14.211 1.00 42.86 O
ATOM 5 O5' A A 7 -4.604 11.288 -12.568 1.00 43.55 O
ATOM 6 C5' A A 7 -5.567 11.084 -11.529 1.00 44.79 C
ATOM 7 C4' A A 7 -6.197 9.723 -11.729 1.00 45.79 C
ATOM 8 O4' A A 7 -6.630 9.640 -13.099 1.00 45.37 O
ATOM 9 C3' A A 7 -5.210 8.573 -11.678 1.00 47.47 C
ATOM 10 O3' A A 7 -4.911 8.245 -10.341 1.00 50.26 O
ATOM 11 C2' A A 7 -5.934 7.468 -12.421 1.00 46.30 C
ATOM 12 O2' A A 7 -6.980 6.945 -11.635 1.00 47.67 O
ATOM 13 C1' A A 7 -6.563 8.295 -13.524 1.00 44.25 C
ATOM 14 N9 A A 7 -6.024 8.238 -14.879 1.00 42.17 N
ATOM 15 C8 A A 7 -5.492 9.263 -15.604 1.00 41.81 C
ATOM 16 N7 A A 7 -5.146 8.937 -16.831 1.00 40.79 N
ATOM 17 C5 A A 7 -5.485 7.601 -16.915 1.00 40.92 C
ATOM 18 C6 A A 7 -5.383 6.656 -17.951 1.00 41.56 C
ATOM 19 N6 A A 7 -4.875 6.938 -19.161 1.00 42.23 N
ATOM 20 N1 A A 7 -5.817 5.398 -17.708 1.00 41.38 N
ATOM 21 C2 A A 7 -6.328 5.106 -16.513 1.00 41.19 C
ATOM 22 N3 A A 7 -6.475 5.914 -15.465 1.00 42.04 N
ATOM 23 C4 A A 7 -6.035 7.157 -15.730 1.00 41.63 C
ATOM 24 P A A 8 -3.359 8.118 -9.944 1.00 53.33 P
ATOM 25 OP1 A A 8 -3.336 8.059 -8.456 1.00 51.87 O
ATOM 26 OP2 A A 8 -2.545 9.137 -10.664 1.00 51.32 O
ATOM 27 O5' A A 8 -2.979 6.682 -10.582 1.00 54.89 O
TER
ATOM 1 O3' U B 36 -10.610 8.785 -15.019 1.00 43.66 O
ATOM 2 P A B 37 -11.011 7.718 -13.913 1.00 45.22 P
ATOM 3 OP1 A B 37 -9.884 6.772 -13.785 1.00 47.85 O
ATOM 4 OP2 A B 37 -12.370 7.206 -14.185 1.00 46.31 O
ATOM 5 O5' A B 37 -11.079 8.676 -12.632 1.00 43.89 O
ATOM 6 C5' A B 37 -10.525 8.320 -11.387 1.00 43.23 C
ATOM 7 C4' A B 37 -10.437 9.539 -10.485 1.00 43.56 C
ATOM 8 O4' A B 37 -9.343 10.386 -10.926 1.00 42.60 O
ATOM 9 C3' A B 37 -11.641 10.468 -10.491 1.00 44.08 C
ATOM 10 O3' A B 37 -12.606 10.054 -9.541 1.00 46.66 O
ATOM 11 C2' A B 37 -11.000 11.779 -10.068 1.00 42.52 C
ATOM 12 O2' A B 37 -10.721 11.787 -8.687 1.00 43.22 O
ATOM 13 C1' A B 37 -9.701 11.751 -10.851 1.00 40.37 C
ATOM 14 N9 A B 37 -9.785 12.289 -12.213 1.00 37.41 N
ATOM 15 C8 A B 37 -9.655 11.591 -13.381 1.00 35.90 C
ATOM 16 N7 A B 37 -9.759 12.328 -14.460 1.00 34.91 N
ATOM 17 C5 A B 37 -9.977 13.599 -13.973 1.00 34.98 C
ATOM 18 C6 A B 37 -10.180 14.835 -14.613 1.00 34.75 C
ATOM 19 N6 A B 37 -10.177 14.979 -15.942 1.00 35.00 N
ATOM 20 N1 A B 37 -10.368 15.922 -13.844 1.00 34.10 N
ATOM 21 C2 A B 37 -10.355 15.778 -12.517 1.00 35.28 C
ATOM 22 N3 A B 37 -10.178 14.666 -11.802 1.00 36.31 N
ATOM 23 C4 A B 37 -9.990 13.598 -12.594 1.00 35.95 C
ATOM 24 P A B 38 -14.168 10.126 -9.900 1.00 49.52 P
ATOM 25 OP1 A B 38 -14.878 9.560 -8.726 1.00 49.90 O
ATOM 26 OP2 A B 38 -14.354 9.572 -11.271 1.00 48.44 O
ATOM 27 O5' A B 38 -14.533 11.683 -9.967 1.00 49.05 O
TER
ATOM 2 P A A 7 -4.072 12.745 -12.908 1.00 42.76 P
ATOM 3 OP1 A A 7 -3.412 13.276 -11.691 1.00 42.17 O
ATOM 4 OP2 A A 7 -3.371 12.726 -14.211 1.00 42.86 O
ATOM 5 O5' A A 7 -4.604 11.288 -12.568 1.00 43.55 O
ATOM 6 C5' A A 7 -5.567 11.084 -11.529 1.00 44.79 C
ATOM 7 C4' A A 7 -6.197 9.723 -11.729 1.00 45.79 C
ATOM 8 O4' A A 7 -6.630 9.640 -13.099 1.00 45.37 O
ATOM 9 C3' A A 7 -5.210 8.573 -11.678 1.00 47.47 C
ATOM 10 O3' A A 7 -4.911 8.245 -10.341 1.00 50.26 O
ATOM 11 C2' A A 7 -5.934 7.468 -12.421 1.00 46.30 C
ATOM 12 O2' A A 7 -6.980 6.945 -11.635 1.00 47.67 O
ATOM 13 C1' A A 7 -6.563 8.295 -13.524 1.00 44.25 C
ATOM 14 N9 A A 7 -6.024 8.238 -14.879 1.00 42.17 N
ATOM 15 C8 A A 7 -5.492 9.263 -15.604 1.00 41.81 C
ATOM 16 N7 A A 7 -5.146 8.937 -16.831 1.00 40.79 N
ATOM 17 C5 A A 7 -5.485 7.601 -16.915 1.00 40.92 C
ATOM 18 C6 A A 7 -5.383 6.656 -17.951 1.00 41.56 C
ATOM 19 N6 A A 7 -4.875 6.938 -19.161 1.00 42.23 N
ATOM 20 N1 A A 7 -5.817 5.398 -17.708 1.00 41.38 N
ATOM 21 C2 A A 7 -6.328 5.106 -16.513 1.00 41.19 C
ATOM 22 N3 A A 7 -6.475 5.914 -15.465 1.00 42.04 N
ATOM 23 C4 A A 7 -6.035 7.157 -15.730 1.00 41.63 C
ATOM 24 P A A 8 -3.359 8.118 -9.944 1.00 53.33 P
ATOM 25 OP1 A A 8 -3.336 8.059 -8.456 1.00 51.87 O
ATOM 26 OP2 A A 8 -2.545 9.137 -10.664 1.00 51.32 O
ATOM 27 O5' A A 8 -2.979 6.682 -10.582 1.00 54.89 O
TER
ATOM 1 O3' U B 36 -10.610 8.785 -15.019 1.00 43.66 O
ATOM 2 P A B 37 -11.011 7.718 -13.913 1.00 45.22 P
ATOM 3 OP1 A B 37 -9.884 6.772 -13.785 1.00 47.85 O
ATOM 4 OP2 A B 37 -12.370 7.206 -14.185 1.00 46.31 O
ATOM 5 O5' A B 37 -11.079 8.676 -12.632 1.00 43.89 O
ATOM 6 C5' A B 37 -10.525 8.320 -11.387 1.00 43.23 C
ATOM 7 C4' A B 37 -10.437 9.539 -10.485 1.00 43.56 C
ATOM 8 O4' A B 37 -9.343 10.386 -10.926 1.00 42.60 O
ATOM 9 C3' A B 37 -11.641 10.468 -10.491 1.00 44.08 C
ATOM 10 O3' A B 37 -12.606 10.054 -9.541 1.00 46.66 O
ATOM 11 C2' A B 37 -11.000 11.779 -10.068 1.00 42.52 C
ATOM 12 O2' A B 37 -10.721 11.787 -8.687 1.00 43.22 O
ATOM 13 C1' A B 37 -9.701 11.751 -10.851 1.00 40.37 C
ATOM 14 N9 A B 37 -9.785 12.289 -12.213 1.00 37.41 N
ATOM 15 C8 A B 37 -9.655 11.591 -13.381 1.00 35.90 C
ATOM 16 N7 A B 37 -9.759 12.328 -14.460 1.00 34.91 N
ATOM 17 C5 A B 37 -9.977 13.599 -13.973 1.00 34.98 C
ATOM 18 C6 A B 37 -10.180 14.835 -14.613 1.00 34.75 C
ATOM 19 N6 A B 37 -10.177 14.979 -15.942 1.00 35.00 N
ATOM 20 N1 A B 37 -10.368 15.922 -13.844 1.00 34.10 N
ATOM 21 C2 A B 37 -10.355 15.778 -12.517 1.00 35.28 C
ATOM 22 N3 A B 37 -10.178 14.666 -11.802 1.00 36.31 N
ATOM 23 C4 A B 37 -9.990 13.598 -12.594 1.00 35.95 C
ATOM 24 P A B 38 -14.168 10.126 -9.900 1.00 49.52 P
ATOM 25 OP1 A B 38 -14.878 9.560 -8.726 1.00 49.90 O
ATOM 26 OP2 A B 38 -14.354 9.572 -11.271 1.00 48.44 O
ATOM 27 O5' A B 38 -14.533 11.683 -9.967 1.00 49.05 O
TER
Atoms:
OP1: (-3.412,13.276,-11.691)
OP2: (-3.371,12.726,-14.211)
C3': (-5.210,8.573,-11.678)
C1': (-6.563,8.295,-13.524)
C5': (-5.567,11.084,-11.529)
O4': (-6.630,9.640,-13.099)
C8: (-5.492,9.263,-15.604)
O2': (-6.980,6.945,-11.635)
C6: (-5.383,6.656,-17.951)
C5: (-5.485,7.601,-16.915)
C4: (-6.035,7.157,-15.730)
P: (-4.072,12.745,-12.908)
C4': (-6.197,9.723,-11.729)
C2': (-5.934,7.468,-12.421)
C2: (-6.328,5.106,-16.513)
N1: (-5.817,5.398,-17.708)
N3: (-6.475,5.914,-15.465)
N6: (-4.875,6.938,-19.161)
N7: (-5.146,8.937,-16.831)
N9: (-6.024,8.238,-14.879)
O5': (-4.604,11.288,-12.568)
O3': (-4.911,8.245,-10.341)
OP2: (-3.371,12.726,-14.211)
C3': (-5.210,8.573,-11.678)
C1': (-6.563,8.295,-13.524)
C5': (-5.567,11.084,-11.529)
O4': (-6.630,9.640,-13.099)
C8: (-5.492,9.263,-15.604)
O2': (-6.980,6.945,-11.635)
C6: (-5.383,6.656,-17.951)
C5: (-5.485,7.601,-16.915)
C4: (-6.035,7.157,-15.730)
P: (-4.072,12.745,-12.908)
C4': (-6.197,9.723,-11.729)
C2': (-5.934,7.468,-12.421)
C2: (-6.328,5.106,-16.513)
N1: (-5.817,5.398,-17.708)
N3: (-6.475,5.914,-15.465)
N6: (-4.875,6.938,-19.161)
N7: (-5.146,8.937,-16.831)
N9: (-6.024,8.238,-14.879)
O5': (-4.604,11.288,-12.568)
O3': (-4.911,8.245,-10.341)
OP1: (-9.884,6.772,-13.785)
OP2: (-12.370,7.206,-14.185)
C3': (-11.641,10.468,-10.491)
C1': (-9.701,11.751,-10.851)
C5': (-10.525,8.320,-11.387)
O4': (-9.343,10.386,-10.926)
C8: (-9.655,11.591,-13.381)
O2': (-10.721,11.787,-8.687)
C6: (-10.180,14.835,-14.613)
C5: (-9.977,13.599,-13.973)
C4: (-9.990,13.598,-12.594)
P: (-11.011,7.718,-13.913)
C4': (-10.437,9.539,-10.485)
C2': (-11.000,11.779,-10.068)
C2: (-10.355,15.778,-12.517)
N1: (-10.368,15.922,-13.844)
N3: (-10.178,14.666,-11.802)
N6: (-10.177,14.979,-15.942)
N7: (-9.759,12.328,-14.460)
N9: (-9.785,12.289,-12.213)
O5': (-11.079,8.676,-12.632)
O3': (-12.606,10.054,-9.541)
OP2: (-12.370,7.206,-14.185)
C3': (-11.641,10.468,-10.491)
C1': (-9.701,11.751,-10.851)
C5': (-10.525,8.320,-11.387)
O4': (-9.343,10.386,-10.926)
C8: (-9.655,11.591,-13.381)
O2': (-10.721,11.787,-8.687)
C6: (-10.180,14.835,-14.613)
C5: (-9.977,13.599,-13.973)
C4: (-9.990,13.598,-12.594)
P: (-11.011,7.718,-13.913)
C4': (-10.437,9.539,-10.485)
C2': (-11.000,11.779,-10.068)
C2: (-10.355,15.778,-12.517)
N1: (-10.368,15.922,-13.844)
N3: (-10.178,14.666,-11.802)
N6: (-10.177,14.979,-15.942)
N7: (-9.759,12.328,-14.460)
N9: (-9.785,12.289,-12.213)
O5': (-11.079,8.676,-12.632)
O3': (-12.606,10.054,-9.541)
Image (generated by PyMOL):