Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5F:A7:A37
Extra
PDB:
ATOM 1 O3' G A 6 13.328 -5.500 -30.197 1.00 44.29 O
ATOM 2 P A A 7 12.540 -4.162 -30.590 1.00 39.60 P
ATOM 3 OP1 A A 7 13.052 -3.682 -31.895 1.00 37.11 O
ATOM 4 OP2 A A 7 12.512 -3.250 -29.417 1.00 40.11 O
ATOM 5 O5' A A 7 11.095 -4.728 -30.887 1.00 41.69 O
ATOM 6 C5' A A 7 10.942 -5.736 -31.872 1.00 43.07 C
ATOM 7 C4' A A 7 9.589 -6.365 -31.766 1.00 43.33 C
ATOM 8 O4' A A 7 9.440 -6.946 -30.448 1.00 43.61 O
ATOM 9 C3' A A 7 8.434 -5.396 -31.873 1.00 43.29 C
ATOM 10 O3' A A 7 8.181 -5.136 -33.245 1.00 45.40 O
ATOM 11 C2' A A 7 7.324 -6.175 -31.184 1.00 43.84 C
ATOM 12 O2' A A 7 6.819 -7.208 -32.004 1.00 44.40 O
ATOM 13 C1' A A 7 8.093 -6.843 -30.043 1.00 41.80 C
ATOM 14 N9 A A 7 8.055 -6.171 -28.748 1.00 40.34 N
ATOM 15 C8 A A 7 9.072 -5.532 -28.088 1.00 39.91 C
ATOM 16 N7 A A 7 8.744 -5.112 -26.889 1.00 39.25 N
ATOM 17 C5 A A 7 7.416 -5.486 -26.759 1.00 39.90 C
ATOM 18 C6 A A 7 6.491 -5.352 -25.706 1.00 40.05 C
ATOM 19 N6 A A 7 6.779 -4.821 -24.519 1.00 41.70 N
ATOM 20 N1 A A 7 5.239 -5.807 -25.913 1.00 40.16 N
ATOM 21 C2 A A 7 4.950 -6.381 -27.085 1.00 41.31 C
ATOM 22 N3 A A 7 5.734 -6.588 -28.139 1.00 42.92 N
ATOM 23 C4 A A 7 6.970 -6.110 -27.910 1.00 41.82 C
ATOM 24 P A A 8 7.916 -3.629 -33.733 1.00 50.70 P
ATOM 25 OP1 A A 8 7.781 -3.626 -35.215 1.00 44.88 O
ATOM 26 OP2 A A 8 8.926 -2.739 -33.092 1.00 46.42 O
ATOM 27 O5' A A 8 6.492 -3.326 -33.087 1.00 53.01 O
TER
ATOM 1 O3' U B 36 8.960 -10.679 -28.493 1.00 43.84 O
ATOM 2 P A B 37 7.834 -11.028 -29.592 1.00 43.92 P
ATOM 3 OP1 A B 37 7.054 -9.822 -29.922 1.00 47.63 O
ATOM 4 OP2 A B 37 7.128 -12.248 -29.187 1.00 45.66 O
ATOM 5 O5' A B 37 8.711 -11.329 -30.888 1.00 42.78 O
ATOM 6 C5' A B 37 8.371 -10.756 -32.152 1.00 42.07 C
ATOM 7 C4' A B 37 9.610 -10.583 -33.009 1.00 43.22 C
ATOM 8 O4' A B 37 10.392 -9.447 -32.546 1.00 40.80 O
ATOM 9 C3' A B 37 10.587 -11.750 -33.003 1.00 42.73 C
ATOM 10 O3' A B 37 10.218 -12.735 -33.954 1.00 42.86 O
ATOM 11 C2' A B 37 11.883 -11.069 -33.412 1.00 41.61 C
ATOM 12 O2' A B 37 11.914 -10.806 -34.800 1.00 40.01 O
ATOM 13 C1' A B 37 11.777 -9.752 -32.640 1.00 39.83 C
ATOM 14 N9 A B 37 12.307 -9.850 -31.280 1.00 36.78 N
ATOM 15 C8 A B 37 11.588 -9.803 -30.113 1.00 36.39 C
ATOM 16 N7 A B 37 12.325 -9.890 -29.036 1.00 33.73 N
ATOM 17 C5 A B 37 13.615 -10.011 -29.521 1.00 32.81 C
ATOM 18 C6 A B 37 14.859 -10.124 -28.879 1.00 34.51 C
ATOM 19 N6 A B 37 15.013 -10.140 -27.551 1.00 34.52 N
ATOM 20 N1 A B 37 15.960 -10.216 -29.654 1.00 33.97 N
ATOM 21 C2 A B 37 15.809 -10.193 -30.985 1.00 34.53 C
ATOM 22 N3 A B 37 14.694 -10.085 -31.704 1.00 35.15 N
ATOM 23 C4 A B 37 13.620 -9.994 -30.904 1.00 34.41 C
ATOM 24 P A B 38 10.266 -14.290 -33.551 1.00 43.78 P
ATOM 25 OP1 A B 38 9.737 -15.068 -34.708 1.00 43.32 O
ATOM 26 OP2 A B 38 9.646 -14.441 -32.212 1.00 42.37 O
ATOM 27 O5' A B 38 11.809 -14.623 -33.397 1.00 44.65 O
TER
ATOM 2 P A A 7 12.540 -4.162 -30.590 1.00 39.60 P
ATOM 3 OP1 A A 7 13.052 -3.682 -31.895 1.00 37.11 O
ATOM 4 OP2 A A 7 12.512 -3.250 -29.417 1.00 40.11 O
ATOM 5 O5' A A 7 11.095 -4.728 -30.887 1.00 41.69 O
ATOM 6 C5' A A 7 10.942 -5.736 -31.872 1.00 43.07 C
ATOM 7 C4' A A 7 9.589 -6.365 -31.766 1.00 43.33 C
ATOM 8 O4' A A 7 9.440 -6.946 -30.448 1.00 43.61 O
ATOM 9 C3' A A 7 8.434 -5.396 -31.873 1.00 43.29 C
ATOM 10 O3' A A 7 8.181 -5.136 -33.245 1.00 45.40 O
ATOM 11 C2' A A 7 7.324 -6.175 -31.184 1.00 43.84 C
ATOM 12 O2' A A 7 6.819 -7.208 -32.004 1.00 44.40 O
ATOM 13 C1' A A 7 8.093 -6.843 -30.043 1.00 41.80 C
ATOM 14 N9 A A 7 8.055 -6.171 -28.748 1.00 40.34 N
ATOM 15 C8 A A 7 9.072 -5.532 -28.088 1.00 39.91 C
ATOM 16 N7 A A 7 8.744 -5.112 -26.889 1.00 39.25 N
ATOM 17 C5 A A 7 7.416 -5.486 -26.759 1.00 39.90 C
ATOM 18 C6 A A 7 6.491 -5.352 -25.706 1.00 40.05 C
ATOM 19 N6 A A 7 6.779 -4.821 -24.519 1.00 41.70 N
ATOM 20 N1 A A 7 5.239 -5.807 -25.913 1.00 40.16 N
ATOM 21 C2 A A 7 4.950 -6.381 -27.085 1.00 41.31 C
ATOM 22 N3 A A 7 5.734 -6.588 -28.139 1.00 42.92 N
ATOM 23 C4 A A 7 6.970 -6.110 -27.910 1.00 41.82 C
ATOM 24 P A A 8 7.916 -3.629 -33.733 1.00 50.70 P
ATOM 25 OP1 A A 8 7.781 -3.626 -35.215 1.00 44.88 O
ATOM 26 OP2 A A 8 8.926 -2.739 -33.092 1.00 46.42 O
ATOM 27 O5' A A 8 6.492 -3.326 -33.087 1.00 53.01 O
TER
ATOM 1 O3' U B 36 8.960 -10.679 -28.493 1.00 43.84 O
ATOM 2 P A B 37 7.834 -11.028 -29.592 1.00 43.92 P
ATOM 3 OP1 A B 37 7.054 -9.822 -29.922 1.00 47.63 O
ATOM 4 OP2 A B 37 7.128 -12.248 -29.187 1.00 45.66 O
ATOM 5 O5' A B 37 8.711 -11.329 -30.888 1.00 42.78 O
ATOM 6 C5' A B 37 8.371 -10.756 -32.152 1.00 42.07 C
ATOM 7 C4' A B 37 9.610 -10.583 -33.009 1.00 43.22 C
ATOM 8 O4' A B 37 10.392 -9.447 -32.546 1.00 40.80 O
ATOM 9 C3' A B 37 10.587 -11.750 -33.003 1.00 42.73 C
ATOM 10 O3' A B 37 10.218 -12.735 -33.954 1.00 42.86 O
ATOM 11 C2' A B 37 11.883 -11.069 -33.412 1.00 41.61 C
ATOM 12 O2' A B 37 11.914 -10.806 -34.800 1.00 40.01 O
ATOM 13 C1' A B 37 11.777 -9.752 -32.640 1.00 39.83 C
ATOM 14 N9 A B 37 12.307 -9.850 -31.280 1.00 36.78 N
ATOM 15 C8 A B 37 11.588 -9.803 -30.113 1.00 36.39 C
ATOM 16 N7 A B 37 12.325 -9.890 -29.036 1.00 33.73 N
ATOM 17 C5 A B 37 13.615 -10.011 -29.521 1.00 32.81 C
ATOM 18 C6 A B 37 14.859 -10.124 -28.879 1.00 34.51 C
ATOM 19 N6 A B 37 15.013 -10.140 -27.551 1.00 34.52 N
ATOM 20 N1 A B 37 15.960 -10.216 -29.654 1.00 33.97 N
ATOM 21 C2 A B 37 15.809 -10.193 -30.985 1.00 34.53 C
ATOM 22 N3 A B 37 14.694 -10.085 -31.704 1.00 35.15 N
ATOM 23 C4 A B 37 13.620 -9.994 -30.904 1.00 34.41 C
ATOM 24 P A B 38 10.266 -14.290 -33.551 1.00 43.78 P
ATOM 25 OP1 A B 38 9.737 -15.068 -34.708 1.00 43.32 O
ATOM 26 OP2 A B 38 9.646 -14.441 -32.212 1.00 42.37 O
ATOM 27 O5' A B 38 11.809 -14.623 -33.397 1.00 44.65 O
TER
Atoms:
OP1: (13.052,-3.682,-31.895)
OP2: (12.512,-3.250,-29.417)
C3': (8.434,-5.396,-31.873)
C1': (8.093,-6.843,-30.043)
C5': (10.942,-5.736,-31.872)
O4': (9.440,-6.946,-30.448)
C8: (9.072,-5.532,-28.088)
O2': (6.819,-7.208,-32.004)
C6: (6.491,-5.352,-25.706)
C5: (7.416,-5.486,-26.759)
C4: (6.970,-6.110,-27.910)
P: (12.540,-4.162,-30.590)
C4': (9.589,-6.365,-31.766)
C2': (7.324,-6.175,-31.184)
C2: (4.950,-6.381,-27.085)
N1: (5.239,-5.807,-25.913)
N3: (5.734,-6.588,-28.139)
N6: (6.779,-4.821,-24.519)
N7: (8.744,-5.112,-26.889)
N9: (8.055,-6.171,-28.748)
O5': (11.095,-4.728,-30.887)
O3': (8.181,-5.136,-33.245)
OP2: (12.512,-3.250,-29.417)
C3': (8.434,-5.396,-31.873)
C1': (8.093,-6.843,-30.043)
C5': (10.942,-5.736,-31.872)
O4': (9.440,-6.946,-30.448)
C8: (9.072,-5.532,-28.088)
O2': (6.819,-7.208,-32.004)
C6: (6.491,-5.352,-25.706)
C5: (7.416,-5.486,-26.759)
C4: (6.970,-6.110,-27.910)
P: (12.540,-4.162,-30.590)
C4': (9.589,-6.365,-31.766)
C2': (7.324,-6.175,-31.184)
C2: (4.950,-6.381,-27.085)
N1: (5.239,-5.807,-25.913)
N3: (5.734,-6.588,-28.139)
N6: (6.779,-4.821,-24.519)
N7: (8.744,-5.112,-26.889)
N9: (8.055,-6.171,-28.748)
O5': (11.095,-4.728,-30.887)
O3': (8.181,-5.136,-33.245)
OP1: (7.054,-9.822,-29.922)
OP2: (7.128,-12.248,-29.187)
C3': (10.587,-11.750,-33.003)
C1': (11.777,-9.752,-32.640)
C5': (8.371,-10.756,-32.152)
O4': (10.392,-9.447,-32.546)
C8: (11.588,-9.803,-30.113)
O2': (11.914,-10.806,-34.800)
C6: (14.859,-10.124,-28.879)
C5: (13.615,-10.011,-29.521)
C4: (13.620,-9.994,-30.904)
P: (7.834,-11.028,-29.592)
C4': (9.610,-10.583,-33.009)
C2': (11.883,-11.069,-33.412)
C2: (15.809,-10.193,-30.985)
N1: (15.960,-10.216,-29.654)
N3: (14.694,-10.085,-31.704)
N6: (15.013,-10.140,-27.551)
N7: (12.325,-9.890,-29.036)
N9: (12.307,-9.850,-31.280)
O5': (8.711,-11.329,-30.888)
O3': (10.218,-12.735,-33.954)
OP2: (7.128,-12.248,-29.187)
C3': (10.587,-11.750,-33.003)
C1': (11.777,-9.752,-32.640)
C5': (8.371,-10.756,-32.152)
O4': (10.392,-9.447,-32.546)
C8: (11.588,-9.803,-30.113)
O2': (11.914,-10.806,-34.800)
C6: (14.859,-10.124,-28.879)
C5: (13.615,-10.011,-29.521)
C4: (13.620,-9.994,-30.904)
P: (7.834,-11.028,-29.592)
C4': (9.610,-10.583,-33.009)
C2': (11.883,-11.069,-33.412)
C2: (15.809,-10.193,-30.985)
N1: (15.960,-10.216,-29.654)
N3: (14.694,-10.085,-31.704)
N6: (15.013,-10.140,-27.551)
N7: (12.325,-9.890,-29.036)
N9: (12.307,-9.850,-31.280)
O5': (8.711,-11.329,-30.888)
O3': (10.218,-12.735,-33.954)
Image (generated by PyMOL):