Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1887:A1888
Extra
PDB:
ATOM 1 O3' C A1886 118.427 89.206 51.082 1.00 88.34 O
ATOM 2 P G A1887 118.885 89.458 52.595 1.00 90.35 P
ATOM 3 OP1 G A1887 120.232 90.084 52.521 1.00 90.21 O
ATOM 4 OP2 G A1887 118.702 88.183 53.346 1.00 89.77 O
ATOM 5 O5' G A1887 117.844 90.548 53.115 1.00 90.16 O
ATOM 6 C5' G A1887 117.687 91.781 52.391 1.00 90.06 C
ATOM 7 C4' G A1887 116.433 92.512 52.813 1.00 90.34 C
ATOM 8 O4' G A1887 115.271 91.660 52.661 1.00 91.15 O
ATOM 9 C3' G A1887 116.318 92.921 54.272 1.00 89.52 C
ATOM 10 O3' G A1887 117.104 94.081 54.540 1.00 86.54 O
ATOM 11 C2' G A1887 114.831 93.254 54.374 1.00 91.34 C
ATOM 12 O2' G A1887 114.541 94.551 53.877 1.00 91.91 O
ATOM 13 C1' G A1887 114.219 92.213 53.432 1.00 92.71 C
ATOM 14 N9 G A1887 113.451 91.157 54.094 1.00 94.65 N
ATOM 15 C8 G A1887 112.117 91.240 54.421 1.00 95.54 C
ATOM 16 N7 G A1887 111.653 90.161 54.987 1.00 95.47 N
ATOM 17 C5 G A1887 112.741 89.305 55.045 1.00 95.90 C
ATOM 18 C6 G A1887 112.831 87.985 55.545 1.00 96.18 C
ATOM 19 O6 G A1887 111.937 87.285 56.044 1.00 95.96 O
ATOM 20 N1 G A1887 114.120 87.478 55.420 1.00 96.86 N
ATOM 21 C2 G A1887 115.189 88.151 54.874 1.00 96.87 C
ATOM 22 N2 G A1887 116.352 87.479 54.845 1.00 96.60 N
ATOM 23 N3 G A1887 115.118 89.389 54.393 1.00 96.35 N
ATOM 24 C4 G A1887 113.870 89.903 54.509 1.00 95.67 C
ATOM 25 P A A1888 116.819 94.959 55.863 1.00 83.89 P
ATOM 26 OP1 A A1888 118.122 95.589 56.207 1.00 84.80 O
ATOM 27 OP2 A A1888 116.144 94.110 56.861 1.00 83.36 O
ATOM 28 O5' A A1888 115.807 96.102 55.373 1.00 81.22 O
TER
ATOM 1 O3' G B1887 117.104 94.081 54.540 1.00 86.54 O
ATOM 2 P A B1888 116.819 94.959 55.863 1.00 83.89 P
ATOM 3 OP1 A B1888 118.122 95.589 56.207 1.00 84.80 O
ATOM 4 OP2 A B1888 116.144 94.110 56.861 1.00 83.36 O
ATOM 5 O5' A B1888 115.807 96.102 55.373 1.00 81.22 O
ATOM 6 C5' A B1888 116.264 97.134 54.459 1.00 76.37 C
ATOM 7 C4' A B1888 115.376 98.366 54.507 1.00 73.01 C
ATOM 8 O4' A B1888 114.143 98.126 53.793 1.00 71.77 O
ATOM 9 C3' A B1888 114.925 98.874 55.869 1.00 70.69 C
ATOM 10 O3' A B1888 115.934 99.618 56.535 1.00 68.39 O
ATOM 11 C2' A B1888 113.713 99.723 55.507 1.00 71.08 C
ATOM 12 O2' A B1888 114.015 101.002 54.976 1.00 71.21 O
ATOM 13 C1' A B1888 113.102 98.874 54.395 1.00 71.14 C
ATOM 14 N9 A B1888 112.118 97.931 54.902 1.00 69.95 N
ATOM 15 C8 A B1888 112.271 96.621 55.269 1.00 68.88 C
ATOM 16 N7 A B1888 111.153 96.045 55.626 1.00 69.19 N
ATOM 17 C5 A B1888 110.205 97.050 55.496 1.00 69.65 C
ATOM 18 C6 A B1888 108.819 97.077 55.704 1.00 69.74 C
ATOM 19 N6 A B1888 108.113 96.023 56.110 1.00 68.94 N
ATOM 20 N1 A B1888 108.174 98.243 55.477 1.00 70.64 N
ATOM 21 C2 A B1888 108.888 99.307 55.075 1.00 71.32 C
ATOM 22 N3 A B1888 110.190 99.400 54.846 1.00 71.12 N
ATOM 23 C4 A B1888 110.793 98.221 55.073 1.00 70.18 C
ATOM 24 P A B1889 116.021 99.566 58.137 1.00 67.14 P
ATOM 25 OP1 A B1889 117.275 100.229 58.594 1.00 66.86 O
ATOM 26 OP2 A B1889 115.739 98.169 58.555 1.00 65.42 O
ATOM 27 O5' A B1889 114.805 100.483 58.596 1.00 66.78 O
TER
ATOM 2 P G A1887 118.885 89.458 52.595 1.00 90.35 P
ATOM 3 OP1 G A1887 120.232 90.084 52.521 1.00 90.21 O
ATOM 4 OP2 G A1887 118.702 88.183 53.346 1.00 89.77 O
ATOM 5 O5' G A1887 117.844 90.548 53.115 1.00 90.16 O
ATOM 6 C5' G A1887 117.687 91.781 52.391 1.00 90.06 C
ATOM 7 C4' G A1887 116.433 92.512 52.813 1.00 90.34 C
ATOM 8 O4' G A1887 115.271 91.660 52.661 1.00 91.15 O
ATOM 9 C3' G A1887 116.318 92.921 54.272 1.00 89.52 C
ATOM 10 O3' G A1887 117.104 94.081 54.540 1.00 86.54 O
ATOM 11 C2' G A1887 114.831 93.254 54.374 1.00 91.34 C
ATOM 12 O2' G A1887 114.541 94.551 53.877 1.00 91.91 O
ATOM 13 C1' G A1887 114.219 92.213 53.432 1.00 92.71 C
ATOM 14 N9 G A1887 113.451 91.157 54.094 1.00 94.65 N
ATOM 15 C8 G A1887 112.117 91.240 54.421 1.00 95.54 C
ATOM 16 N7 G A1887 111.653 90.161 54.987 1.00 95.47 N
ATOM 17 C5 G A1887 112.741 89.305 55.045 1.00 95.90 C
ATOM 18 C6 G A1887 112.831 87.985 55.545 1.00 96.18 C
ATOM 19 O6 G A1887 111.937 87.285 56.044 1.00 95.96 O
ATOM 20 N1 G A1887 114.120 87.478 55.420 1.00 96.86 N
ATOM 21 C2 G A1887 115.189 88.151 54.874 1.00 96.87 C
ATOM 22 N2 G A1887 116.352 87.479 54.845 1.00 96.60 N
ATOM 23 N3 G A1887 115.118 89.389 54.393 1.00 96.35 N
ATOM 24 C4 G A1887 113.870 89.903 54.509 1.00 95.67 C
ATOM 25 P A A1888 116.819 94.959 55.863 1.00 83.89 P
ATOM 26 OP1 A A1888 118.122 95.589 56.207 1.00 84.80 O
ATOM 27 OP2 A A1888 116.144 94.110 56.861 1.00 83.36 O
ATOM 28 O5' A A1888 115.807 96.102 55.373 1.00 81.22 O
TER
ATOM 1 O3' G B1887 117.104 94.081 54.540 1.00 86.54 O
ATOM 2 P A B1888 116.819 94.959 55.863 1.00 83.89 P
ATOM 3 OP1 A B1888 118.122 95.589 56.207 1.00 84.80 O
ATOM 4 OP2 A B1888 116.144 94.110 56.861 1.00 83.36 O
ATOM 5 O5' A B1888 115.807 96.102 55.373 1.00 81.22 O
ATOM 6 C5' A B1888 116.264 97.134 54.459 1.00 76.37 C
ATOM 7 C4' A B1888 115.376 98.366 54.507 1.00 73.01 C
ATOM 8 O4' A B1888 114.143 98.126 53.793 1.00 71.77 O
ATOM 9 C3' A B1888 114.925 98.874 55.869 1.00 70.69 C
ATOM 10 O3' A B1888 115.934 99.618 56.535 1.00 68.39 O
ATOM 11 C2' A B1888 113.713 99.723 55.507 1.00 71.08 C
ATOM 12 O2' A B1888 114.015 101.002 54.976 1.00 71.21 O
ATOM 13 C1' A B1888 113.102 98.874 54.395 1.00 71.14 C
ATOM 14 N9 A B1888 112.118 97.931 54.902 1.00 69.95 N
ATOM 15 C8 A B1888 112.271 96.621 55.269 1.00 68.88 C
ATOM 16 N7 A B1888 111.153 96.045 55.626 1.00 69.19 N
ATOM 17 C5 A B1888 110.205 97.050 55.496 1.00 69.65 C
ATOM 18 C6 A B1888 108.819 97.077 55.704 1.00 69.74 C
ATOM 19 N6 A B1888 108.113 96.023 56.110 1.00 68.94 N
ATOM 20 N1 A B1888 108.174 98.243 55.477 1.00 70.64 N
ATOM 21 C2 A B1888 108.888 99.307 55.075 1.00 71.32 C
ATOM 22 N3 A B1888 110.190 99.400 54.846 1.00 71.12 N
ATOM 23 C4 A B1888 110.793 98.221 55.073 1.00 70.18 C
ATOM 24 P A B1889 116.021 99.566 58.137 1.00 67.14 P
ATOM 25 OP1 A B1889 117.275 100.229 58.594 1.00 66.86 O
ATOM 26 OP2 A B1889 115.739 98.169 58.555 1.00 65.42 O
ATOM 27 O5' A B1889 114.805 100.483 58.596 1.00 66.78 O
TER
Atoms:
OP1: (120.232,90.084,52.521)
OP2: (118.702,88.183,53.346)
C3': (116.318,92.921,54.272)
C1': (114.219,92.213,53.432)
C5': (117.687,91.781,52.391)
O6: (111.937,87.285,56.044)
O4': (115.271,91.660,52.661)
C8: (112.117,91.240,54.421)
C2: (115.189,88.151,54.874)
C6: (112.831,87.985,55.545)
C5: (112.741,89.305,55.045)
C4: (113.870,89.903,54.509)
P: (118.885,89.458,52.595)
C4': (116.433,92.512,52.813)
C2': (114.831,93.254,54.374)
O2': (114.541,94.551,53.877)
N1: (114.120,87.478,55.420)
N2: (116.352,87.479,54.845)
N3: (115.118,89.389,54.393)
N7: (111.653,90.161,54.987)
N9: (113.451,91.157,54.094)
O5': (117.844,90.548,53.115)
O3': (117.104,94.081,54.540)
OP2: (118.702,88.183,53.346)
C3': (116.318,92.921,54.272)
C1': (114.219,92.213,53.432)
C5': (117.687,91.781,52.391)
O6: (111.937,87.285,56.044)
O4': (115.271,91.660,52.661)
C8: (112.117,91.240,54.421)
C2: (115.189,88.151,54.874)
C6: (112.831,87.985,55.545)
C5: (112.741,89.305,55.045)
C4: (113.870,89.903,54.509)
P: (118.885,89.458,52.595)
C4': (116.433,92.512,52.813)
C2': (114.831,93.254,54.374)
O2': (114.541,94.551,53.877)
N1: (114.120,87.478,55.420)
N2: (116.352,87.479,54.845)
N3: (115.118,89.389,54.393)
N7: (111.653,90.161,54.987)
N9: (113.451,91.157,54.094)
O5': (117.844,90.548,53.115)
O3': (117.104,94.081,54.540)
OP1: (118.122,95.589,56.207)
OP2: (116.144,94.110,56.861)
C3': (114.925,98.874,55.869)
C1': (113.102,98.874,54.395)
C5': (116.264,97.134,54.459)
O4': (114.143,98.126,53.793)
C8: (112.271,96.621,55.269)
O2': (114.015,101.002,54.976)
C6: (108.819,97.077,55.704)
C5: (110.205,97.050,55.496)
C4: (110.793,98.221,55.073)
P: (116.819,94.959,55.863)
C4': (115.376,98.366,54.507)
C2': (113.713,99.723,55.507)
C2: (108.888,99.307,55.075)
N1: (108.174,98.243,55.477)
N3: (110.190,99.400,54.846)
N6: (108.113,96.023,56.110)
N7: (111.153,96.045,55.626)
N9: (112.118,97.931,54.902)
O5': (115.807,96.102,55.373)
O3': (115.934,99.618,56.535)
OP2: (116.144,94.110,56.861)
C3': (114.925,98.874,55.869)
C1': (113.102,98.874,54.395)
C5': (116.264,97.134,54.459)
O4': (114.143,98.126,53.793)
C8: (112.271,96.621,55.269)
O2': (114.015,101.002,54.976)
C6: (108.819,97.077,55.704)
C5: (110.205,97.050,55.496)
C4: (110.793,98.221,55.073)
P: (116.819,94.959,55.863)
C4': (115.376,98.366,54.507)
C2': (113.713,99.723,55.507)
C2: (108.888,99.307,55.075)
N1: (108.174,98.243,55.477)
N3: (110.190,99.400,54.846)
N6: (108.113,96.023,56.110)
N7: (111.153,96.045,55.626)
N9: (112.118,97.931,54.902)
O5': (115.807,96.102,55.373)
O3': (115.934,99.618,56.535)
Image (generated by PyMOL):