Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01887:01888
Extra
PDB:
ATOM 1 O3' C A1886 118.375 88.989 50.637 1.00 81.44 O
ATOM 2 P G A1887 118.806 89.270 52.163 1.00 84.62 P
ATOM 3 OP1 G A1887 120.136 89.937 52.118 1.00 84.28 O
ATOM 4 OP2 G A1887 118.638 88.019 52.952 1.00 84.38 O
ATOM 5 O5' G A1887 117.734 90.329 52.685 1.00 84.81 O
ATOM 6 C5' G A1887 117.475 91.520 51.931 1.00 83.83 C
ATOM 7 C4' G A1887 116.190 92.172 52.375 1.00 82.93 C
ATOM 8 O4' G A1887 115.101 91.220 52.359 1.00 83.56 O
ATOM 9 C3' G A1887 116.094 92.682 53.801 1.00 82.10 C
ATOM 10 O3' G A1887 116.836 93.898 53.948 1.00 78.88 O
ATOM 11 C2' G A1887 114.588 92.928 53.922 1.00 84.54 C
ATOM 12 O2' G A1887 114.204 94.158 53.332 1.00 85.16 O
ATOM 13 C1' G A1887 114.014 91.799 53.055 1.00 85.57 C
ATOM 14 N9 G A1887 113.226 90.773 53.741 1.00 87.79 N
ATOM 15 C8 G A1887 111.894 90.876 54.079 1.00 88.09 C
ATOM 16 N7 G A1887 111.422 89.806 54.656 1.00 87.90 N
ATOM 17 C5 G A1887 112.505 88.941 54.710 1.00 89.47 C
ATOM 18 C6 G A1887 112.596 87.625 55.224 1.00 90.73 C
ATOM 19 O6 G A1887 111.708 86.935 55.741 1.00 91.82 O
ATOM 20 N1 G A1887 113.882 87.114 55.091 1.00 92.11 N
ATOM 21 C2 G A1887 114.946 87.782 54.533 1.00 92.07 C
ATOM 22 N2 G A1887 116.115 87.116 54.513 1.00 93.09 N
ATOM 23 N3 G A1887 114.872 89.010 54.037 1.00 90.22 N
ATOM 24 C4 G A1887 113.632 89.525 54.159 1.00 88.90 C
ATOM 25 P A A1888 116.677 94.793 55.282 1.00 76.81 P
ATOM 26 OP1 A A1888 117.988 95.440 55.556 1.00 76.97 O
ATOM 27 OP2 A A1888 116.036 93.978 56.339 1.00 76.54 O
ATOM 28 O5' A A1888 115.669 95.946 54.841 1.00 72.74 O
TER
ATOM 1 O3' G B1887 116.836 93.898 53.948 1.00 78.88 O
ATOM 2 P A B1888 116.677 94.793 55.282 1.00 76.81 P
ATOM 3 OP1 A B1888 117.988 95.440 55.556 1.00 76.97 O
ATOM 4 OP2 A B1888 116.036 93.978 56.339 1.00 76.54 O
ATOM 5 O5' A B1888 115.669 95.946 54.841 1.00 72.74 O
ATOM 6 C5' A B1888 116.094 96.962 53.914 1.00 66.67 C
ATOM 7 C4' A B1888 115.190 98.170 53.988 1.00 61.31 C
ATOM 8 O4' A B1888 113.934 97.911 53.318 1.00 60.89 O
ATOM 9 C3' A B1888 114.782 98.638 55.370 1.00 59.01 C
ATOM 10 O3' A B1888 115.825 99.385 55.973 1.00 57.20 O
ATOM 11 C2' A B1888 113.553 99.481 55.055 1.00 59.41 C
ATOM 12 O2' A B1888 113.880 100.745 54.511 1.00 59.52 O
ATOM 13 C1' A B1888 112.902 98.653 53.946 1.00 59.76 C
ATOM 14 N9 A B1888 111.893 97.712 54.432 1.00 59.74 N
ATOM 15 C8 A B1888 112.063 96.397 54.800 1.00 59.74 C
ATOM 16 N7 A B1888 110.956 95.805 55.177 1.00 59.37 N
ATOM 17 C5 A B1888 109.993 96.797 55.057 1.00 58.63 C
ATOM 18 C6 A B1888 108.617 96.808 55.311 1.00 58.16 C
ATOM 19 N6 A B1888 107.941 95.753 55.770 1.00 57.02 N
ATOM 20 N1 A B1888 107.947 97.957 55.081 1.00 58.76 N
ATOM 21 C2 A B1888 108.628 99.022 54.638 1.00 58.02 C
ATOM 22 N3 A B1888 109.922 99.138 54.371 1.00 58.16 N
ATOM 23 C4 A B1888 110.557 97.977 54.602 1.00 58.79 C
ATOM 24 P A B1889 116.024 99.340 57.567 1.00 56.83 P
ATOM 25 OP1 A B1889 117.344 99.975 57.840 1.00 54.63 O
ATOM 26 OP2 A B1889 115.752 97.969 58.076 1.00 55.05 O
ATOM 27 O5' A B1889 114.866 100.288 58.116 1.00 54.69 O
TER
ATOM 2 P G A1887 118.806 89.270 52.163 1.00 84.62 P
ATOM 3 OP1 G A1887 120.136 89.937 52.118 1.00 84.28 O
ATOM 4 OP2 G A1887 118.638 88.019 52.952 1.00 84.38 O
ATOM 5 O5' G A1887 117.734 90.329 52.685 1.00 84.81 O
ATOM 6 C5' G A1887 117.475 91.520 51.931 1.00 83.83 C
ATOM 7 C4' G A1887 116.190 92.172 52.375 1.00 82.93 C
ATOM 8 O4' G A1887 115.101 91.220 52.359 1.00 83.56 O
ATOM 9 C3' G A1887 116.094 92.682 53.801 1.00 82.10 C
ATOM 10 O3' G A1887 116.836 93.898 53.948 1.00 78.88 O
ATOM 11 C2' G A1887 114.588 92.928 53.922 1.00 84.54 C
ATOM 12 O2' G A1887 114.204 94.158 53.332 1.00 85.16 O
ATOM 13 C1' G A1887 114.014 91.799 53.055 1.00 85.57 C
ATOM 14 N9 G A1887 113.226 90.773 53.741 1.00 87.79 N
ATOM 15 C8 G A1887 111.894 90.876 54.079 1.00 88.09 C
ATOM 16 N7 G A1887 111.422 89.806 54.656 1.00 87.90 N
ATOM 17 C5 G A1887 112.505 88.941 54.710 1.00 89.47 C
ATOM 18 C6 G A1887 112.596 87.625 55.224 1.00 90.73 C
ATOM 19 O6 G A1887 111.708 86.935 55.741 1.00 91.82 O
ATOM 20 N1 G A1887 113.882 87.114 55.091 1.00 92.11 N
ATOM 21 C2 G A1887 114.946 87.782 54.533 1.00 92.07 C
ATOM 22 N2 G A1887 116.115 87.116 54.513 1.00 93.09 N
ATOM 23 N3 G A1887 114.872 89.010 54.037 1.00 90.22 N
ATOM 24 C4 G A1887 113.632 89.525 54.159 1.00 88.90 C
ATOM 25 P A A1888 116.677 94.793 55.282 1.00 76.81 P
ATOM 26 OP1 A A1888 117.988 95.440 55.556 1.00 76.97 O
ATOM 27 OP2 A A1888 116.036 93.978 56.339 1.00 76.54 O
ATOM 28 O5' A A1888 115.669 95.946 54.841 1.00 72.74 O
TER
ATOM 1 O3' G B1887 116.836 93.898 53.948 1.00 78.88 O
ATOM 2 P A B1888 116.677 94.793 55.282 1.00 76.81 P
ATOM 3 OP1 A B1888 117.988 95.440 55.556 1.00 76.97 O
ATOM 4 OP2 A B1888 116.036 93.978 56.339 1.00 76.54 O
ATOM 5 O5' A B1888 115.669 95.946 54.841 1.00 72.74 O
ATOM 6 C5' A B1888 116.094 96.962 53.914 1.00 66.67 C
ATOM 7 C4' A B1888 115.190 98.170 53.988 1.00 61.31 C
ATOM 8 O4' A B1888 113.934 97.911 53.318 1.00 60.89 O
ATOM 9 C3' A B1888 114.782 98.638 55.370 1.00 59.01 C
ATOM 10 O3' A B1888 115.825 99.385 55.973 1.00 57.20 O
ATOM 11 C2' A B1888 113.553 99.481 55.055 1.00 59.41 C
ATOM 12 O2' A B1888 113.880 100.745 54.511 1.00 59.52 O
ATOM 13 C1' A B1888 112.902 98.653 53.946 1.00 59.76 C
ATOM 14 N9 A B1888 111.893 97.712 54.432 1.00 59.74 N
ATOM 15 C8 A B1888 112.063 96.397 54.800 1.00 59.74 C
ATOM 16 N7 A B1888 110.956 95.805 55.177 1.00 59.37 N
ATOM 17 C5 A B1888 109.993 96.797 55.057 1.00 58.63 C
ATOM 18 C6 A B1888 108.617 96.808 55.311 1.00 58.16 C
ATOM 19 N6 A B1888 107.941 95.753 55.770 1.00 57.02 N
ATOM 20 N1 A B1888 107.947 97.957 55.081 1.00 58.76 N
ATOM 21 C2 A B1888 108.628 99.022 54.638 1.00 58.02 C
ATOM 22 N3 A B1888 109.922 99.138 54.371 1.00 58.16 N
ATOM 23 C4 A B1888 110.557 97.977 54.602 1.00 58.79 C
ATOM 24 P A B1889 116.024 99.340 57.567 1.00 56.83 P
ATOM 25 OP1 A B1889 117.344 99.975 57.840 1.00 54.63 O
ATOM 26 OP2 A B1889 115.752 97.969 58.076 1.00 55.05 O
ATOM 27 O5' A B1889 114.866 100.288 58.116 1.00 54.69 O
TER
Atoms:
OP1: (120.136,89.937,52.118)
OP2: (118.638,88.019,52.952)
C3': (116.094,92.682,53.801)
C1': (114.014,91.799,53.055)
C5': (117.475,91.520,51.931)
O6: (111.708,86.935,55.741)
O4': (115.101,91.220,52.359)
C8: (111.894,90.876,54.079)
C2: (114.946,87.782,54.533)
C6: (112.596,87.625,55.224)
C5: (112.505,88.941,54.710)
C4: (113.632,89.525,54.159)
P: (118.806,89.270,52.163)
C4': (116.190,92.172,52.375)
C2': (114.588,92.928,53.922)
O2': (114.204,94.158,53.332)
N1: (113.882,87.114,55.091)
N2: (116.115,87.116,54.513)
N3: (114.872,89.010,54.037)
N7: (111.422,89.806,54.656)
N9: (113.226,90.773,53.741)
O5': (117.734,90.329,52.685)
O3': (116.836,93.898,53.948)
OP2: (118.638,88.019,52.952)
C3': (116.094,92.682,53.801)
C1': (114.014,91.799,53.055)
C5': (117.475,91.520,51.931)
O6: (111.708,86.935,55.741)
O4': (115.101,91.220,52.359)
C8: (111.894,90.876,54.079)
C2: (114.946,87.782,54.533)
C6: (112.596,87.625,55.224)
C5: (112.505,88.941,54.710)
C4: (113.632,89.525,54.159)
P: (118.806,89.270,52.163)
C4': (116.190,92.172,52.375)
C2': (114.588,92.928,53.922)
O2': (114.204,94.158,53.332)
N1: (113.882,87.114,55.091)
N2: (116.115,87.116,54.513)
N3: (114.872,89.010,54.037)
N7: (111.422,89.806,54.656)
N9: (113.226,90.773,53.741)
O5': (117.734,90.329,52.685)
O3': (116.836,93.898,53.948)
OP1: (117.988,95.440,55.556)
OP2: (116.036,93.978,56.339)
C3': (114.782,98.638,55.370)
C1': (112.902,98.653,53.946)
C5': (116.094,96.962,53.914)
O4': (113.934,97.911,53.318)
C8: (112.063,96.397,54.800)
O2': (113.880,100.745,54.511)
C6: (108.617,96.808,55.311)
C5: (109.993,96.797,55.057)
C4: (110.557,97.977,54.602)
P: (116.677,94.793,55.282)
C4': (115.190,98.170,53.988)
C2': (113.553,99.481,55.055)
C2: (108.628,99.022,54.638)
N1: (107.947,97.957,55.081)
N3: (109.922,99.138,54.371)
N6: (107.941,95.753,55.770)
N7: (110.956,95.805,55.177)
N9: (111.893,97.712,54.432)
O5': (115.669,95.946,54.841)
O3': (115.825,99.385,55.973)
OP2: (116.036,93.978,56.339)
C3': (114.782,98.638,55.370)
C1': (112.902,98.653,53.946)
C5': (116.094,96.962,53.914)
O4': (113.934,97.911,53.318)
C8: (112.063,96.397,54.800)
O2': (113.880,100.745,54.511)
C6: (108.617,96.808,55.311)
C5: (109.993,96.797,55.057)
C4: (110.557,97.977,54.602)
P: (116.677,94.793,55.282)
C4': (115.190,98.170,53.988)
C2': (113.553,99.481,55.055)
C2: (108.628,99.022,54.638)
N1: (107.947,97.957,55.081)
N3: (109.922,99.138,54.371)
N6: (107.941,95.753,55.770)
N7: (110.956,95.805,55.177)
N9: (111.893,97.712,54.432)
O5': (115.669,95.946,54.841)
O3': (115.825,99.385,55.973)
Image (generated by PyMOL):