Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01887:01888
Extra
PDB:
ATOM 1 O3' C A1886 118.477 89.086 50.653 1.00 83.02 O
ATOM 2 P G A1887 118.883 89.354 52.187 1.00 84.67 P
ATOM 3 OP1 G A1887 120.212 90.026 52.172 1.00 84.50 O
ATOM 4 OP2 G A1887 118.706 88.091 52.955 1.00 85.03 O
ATOM 5 O5' G A1887 117.791 90.399 52.698 1.00 84.99 O
ATOM 6 C5' G A1887 117.506 91.574 51.930 1.00 85.14 C
ATOM 7 C4' G A1887 116.212 92.205 52.371 1.00 84.44 C
ATOM 8 O4' G A1887 115.140 91.235 52.340 1.00 85.36 O
ATOM 9 C3' G A1887 116.114 92.699 53.803 1.00 83.52 C
ATOM 10 O3' G A1887 116.838 93.930 53.941 1.00 78.92 O
ATOM 11 C2' G A1887 114.604 92.904 53.940 1.00 86.24 C
ATOM 12 O2' G A1887 114.195 94.135 53.371 1.00 87.72 O
ATOM 13 C1' G A1887 114.049 91.777 53.057 1.00 87.97 C
ATOM 14 N9 G A1887 113.291 90.716 53.722 1.00 91.46 N
ATOM 15 C8 G A1887 111.955 90.770 54.053 1.00 92.16 C
ATOM 16 N7 G A1887 111.516 89.678 54.616 1.00 92.86 N
ATOM 17 C5 G A1887 112.627 88.849 54.667 1.00 94.69 C
ATOM 18 C6 G A1887 112.764 87.523 55.175 1.00 96.43 C
ATOM 19 O6 G A1887 111.898 86.790 55.685 1.00 96.31 O
ATOM 20 N1 G A1887 114.070 87.061 55.042 1.00 98.31 N
ATOM 21 C2 G A1887 115.113 87.775 54.492 1.00 98.59 C
ATOM 22 N2 G A1887 116.309 87.152 54.470 1.00 99.46 N
ATOM 23 N3 G A1887 114.995 89.006 54.004 1.00 96.40 N
ATOM 24 C4 G A1887 113.736 89.478 54.126 1.00 93.89 C
ATOM 25 P A A1888 116.665 94.840 55.262 1.00 75.72 P
ATOM 26 OP1 A A1888 117.972 95.486 55.531 1.00 76.89 O
ATOM 27 OP2 A A1888 116.022 94.049 56.330 1.00 76.65 O
ATOM 28 O5' A A1888 115.662 95.989 54.796 1.00 73.25 O
TER
ATOM 1 O3' G B1887 116.838 93.930 53.941 1.00 78.92 O
ATOM 2 P A B1888 116.665 94.840 55.262 1.00 75.72 P
ATOM 3 OP1 A B1888 117.972 95.486 55.531 1.00 76.89 O
ATOM 4 OP2 A B1888 116.022 94.049 56.330 1.00 76.65 O
ATOM 5 O5' A B1888 115.662 95.989 54.796 1.00 73.25 O
ATOM 6 C5' A B1888 116.103 97.014 53.881 1.00 69.78 C
ATOM 7 C4' A B1888 115.235 98.253 53.990 1.00 67.41 C
ATOM 8 O4' A B1888 113.970 98.050 53.312 1.00 66.99 O
ATOM 9 C3' A B1888 114.848 98.719 55.383 1.00 65.33 C
ATOM 10 O3' A B1888 115.896 99.447 56.005 1.00 63.29 O
ATOM 11 C2' A B1888 113.626 99.581 55.094 1.00 65.91 C
ATOM 12 O2' A B1888 113.961 100.853 54.574 1.00 66.98 O
ATOM 13 C1' A B1888 112.952 98.776 53.982 1.00 66.34 C
ATOM 14 N9 A B1888 111.966 97.815 54.476 1.00 66.43 N
ATOM 15 C8 A B1888 112.180 96.509 54.853 1.00 66.27 C
ATOM 16 N7 A B1888 111.093 95.883 55.235 1.00 66.25 N
ATOM 17 C5 A B1888 110.097 96.841 55.109 1.00 65.42 C
ATOM 18 C6 A B1888 108.720 96.805 55.362 1.00 63.85 C
ATOM 19 N6 A B1888 108.080 95.729 55.820 1.00 63.30 N
ATOM 20 N1 A B1888 108.012 97.928 55.133 1.00 64.37 N
ATOM 21 C2 A B1888 108.655 99.014 54.686 1.00 64.58 C
ATOM 22 N3 A B1888 109.945 99.175 54.414 1.00 65.21 N
ATOM 23 C4 A B1888 110.621 98.038 54.648 1.00 65.89 C
ATOM 24 P A B1889 116.052 99.410 57.604 1.00 62.69 P
ATOM 25 OP1 A B1889 117.360 100.025 57.952 1.00 61.37 O
ATOM 26 OP2 A B1889 115.741 98.036 58.080 1.00 63.08 O
ATOM 27 O5' A B1889 114.889 100.368 58.119 1.00 61.65 O
TER
ATOM 2 P G A1887 118.883 89.354 52.187 1.00 84.67 P
ATOM 3 OP1 G A1887 120.212 90.026 52.172 1.00 84.50 O
ATOM 4 OP2 G A1887 118.706 88.091 52.955 1.00 85.03 O
ATOM 5 O5' G A1887 117.791 90.399 52.698 1.00 84.99 O
ATOM 6 C5' G A1887 117.506 91.574 51.930 1.00 85.14 C
ATOM 7 C4' G A1887 116.212 92.205 52.371 1.00 84.44 C
ATOM 8 O4' G A1887 115.140 91.235 52.340 1.00 85.36 O
ATOM 9 C3' G A1887 116.114 92.699 53.803 1.00 83.52 C
ATOM 10 O3' G A1887 116.838 93.930 53.941 1.00 78.92 O
ATOM 11 C2' G A1887 114.604 92.904 53.940 1.00 86.24 C
ATOM 12 O2' G A1887 114.195 94.135 53.371 1.00 87.72 O
ATOM 13 C1' G A1887 114.049 91.777 53.057 1.00 87.97 C
ATOM 14 N9 G A1887 113.291 90.716 53.722 1.00 91.46 N
ATOM 15 C8 G A1887 111.955 90.770 54.053 1.00 92.16 C
ATOM 16 N7 G A1887 111.516 89.678 54.616 1.00 92.86 N
ATOM 17 C5 G A1887 112.627 88.849 54.667 1.00 94.69 C
ATOM 18 C6 G A1887 112.764 87.523 55.175 1.00 96.43 C
ATOM 19 O6 G A1887 111.898 86.790 55.685 1.00 96.31 O
ATOM 20 N1 G A1887 114.070 87.061 55.042 1.00 98.31 N
ATOM 21 C2 G A1887 115.113 87.775 54.492 1.00 98.59 C
ATOM 22 N2 G A1887 116.309 87.152 54.470 1.00 99.46 N
ATOM 23 N3 G A1887 114.995 89.006 54.004 1.00 96.40 N
ATOM 24 C4 G A1887 113.736 89.478 54.126 1.00 93.89 C
ATOM 25 P A A1888 116.665 94.840 55.262 1.00 75.72 P
ATOM 26 OP1 A A1888 117.972 95.486 55.531 1.00 76.89 O
ATOM 27 OP2 A A1888 116.022 94.049 56.330 1.00 76.65 O
ATOM 28 O5' A A1888 115.662 95.989 54.796 1.00 73.25 O
TER
ATOM 1 O3' G B1887 116.838 93.930 53.941 1.00 78.92 O
ATOM 2 P A B1888 116.665 94.840 55.262 1.00 75.72 P
ATOM 3 OP1 A B1888 117.972 95.486 55.531 1.00 76.89 O
ATOM 4 OP2 A B1888 116.022 94.049 56.330 1.00 76.65 O
ATOM 5 O5' A B1888 115.662 95.989 54.796 1.00 73.25 O
ATOM 6 C5' A B1888 116.103 97.014 53.881 1.00 69.78 C
ATOM 7 C4' A B1888 115.235 98.253 53.990 1.00 67.41 C
ATOM 8 O4' A B1888 113.970 98.050 53.312 1.00 66.99 O
ATOM 9 C3' A B1888 114.848 98.719 55.383 1.00 65.33 C
ATOM 10 O3' A B1888 115.896 99.447 56.005 1.00 63.29 O
ATOM 11 C2' A B1888 113.626 99.581 55.094 1.00 65.91 C
ATOM 12 O2' A B1888 113.961 100.853 54.574 1.00 66.98 O
ATOM 13 C1' A B1888 112.952 98.776 53.982 1.00 66.34 C
ATOM 14 N9 A B1888 111.966 97.815 54.476 1.00 66.43 N
ATOM 15 C8 A B1888 112.180 96.509 54.853 1.00 66.27 C
ATOM 16 N7 A B1888 111.093 95.883 55.235 1.00 66.25 N
ATOM 17 C5 A B1888 110.097 96.841 55.109 1.00 65.42 C
ATOM 18 C6 A B1888 108.720 96.805 55.362 1.00 63.85 C
ATOM 19 N6 A B1888 108.080 95.729 55.820 1.00 63.30 N
ATOM 20 N1 A B1888 108.012 97.928 55.133 1.00 64.37 N
ATOM 21 C2 A B1888 108.655 99.014 54.686 1.00 64.58 C
ATOM 22 N3 A B1888 109.945 99.175 54.414 1.00 65.21 N
ATOM 23 C4 A B1888 110.621 98.038 54.648 1.00 65.89 C
ATOM 24 P A B1889 116.052 99.410 57.604 1.00 62.69 P
ATOM 25 OP1 A B1889 117.360 100.025 57.952 1.00 61.37 O
ATOM 26 OP2 A B1889 115.741 98.036 58.080 1.00 63.08 O
ATOM 27 O5' A B1889 114.889 100.368 58.119 1.00 61.65 O
TER
Atoms:
OP1: (120.212,90.026,52.172)
OP2: (118.706,88.091,52.955)
C3': (116.114,92.699,53.803)
C1': (114.049,91.777,53.057)
C5': (117.506,91.574,51.930)
O6: (111.898,86.790,55.685)
O4': (115.140,91.235,52.340)
C8: (111.955,90.770,54.053)
C2: (115.113,87.775,54.492)
C6: (112.764,87.523,55.175)
C5: (112.627,88.849,54.667)
C4: (113.736,89.478,54.126)
P: (118.883,89.354,52.187)
C4': (116.212,92.205,52.371)
C2': (114.604,92.904,53.940)
O2': (114.195,94.135,53.371)
N1: (114.070,87.061,55.042)
N2: (116.309,87.152,54.470)
N3: (114.995,89.006,54.004)
N7: (111.516,89.678,54.616)
N9: (113.291,90.716,53.722)
O5': (117.791,90.399,52.698)
O3': (116.838,93.930,53.941)
OP2: (118.706,88.091,52.955)
C3': (116.114,92.699,53.803)
C1': (114.049,91.777,53.057)
C5': (117.506,91.574,51.930)
O6: (111.898,86.790,55.685)
O4': (115.140,91.235,52.340)
C8: (111.955,90.770,54.053)
C2: (115.113,87.775,54.492)
C6: (112.764,87.523,55.175)
C5: (112.627,88.849,54.667)
C4: (113.736,89.478,54.126)
P: (118.883,89.354,52.187)
C4': (116.212,92.205,52.371)
C2': (114.604,92.904,53.940)
O2': (114.195,94.135,53.371)
N1: (114.070,87.061,55.042)
N2: (116.309,87.152,54.470)
N3: (114.995,89.006,54.004)
N7: (111.516,89.678,54.616)
N9: (113.291,90.716,53.722)
O5': (117.791,90.399,52.698)
O3': (116.838,93.930,53.941)
OP1: (117.972,95.486,55.531)
OP2: (116.022,94.049,56.330)
C3': (114.848,98.719,55.383)
C1': (112.952,98.776,53.982)
C5': (116.103,97.014,53.881)
O4': (113.970,98.050,53.312)
C8: (112.180,96.509,54.853)
O2': (113.961,100.853,54.574)
C6: (108.720,96.805,55.362)
C5: (110.097,96.841,55.109)
C4: (110.621,98.038,54.648)
P: (116.665,94.840,55.262)
C4': (115.235,98.253,53.990)
C2': (113.626,99.581,55.094)
C2: (108.655,99.014,54.686)
N1: (108.012,97.928,55.133)
N3: (109.945,99.175,54.414)
N6: (108.080,95.729,55.820)
N7: (111.093,95.883,55.235)
N9: (111.966,97.815,54.476)
O5': (115.662,95.989,54.796)
O3': (115.896,99.447,56.005)
OP2: (116.022,94.049,56.330)
C3': (114.848,98.719,55.383)
C1': (112.952,98.776,53.982)
C5': (116.103,97.014,53.881)
O4': (113.970,98.050,53.312)
C8: (112.180,96.509,54.853)
O2': (113.961,100.853,54.574)
C6: (108.720,96.805,55.362)
C5: (110.097,96.841,55.109)
C4: (110.621,98.038,54.648)
P: (116.665,94.840,55.262)
C4': (115.235,98.253,53.990)
C2': (113.626,99.581,55.094)
C2: (108.655,99.014,54.686)
N1: (108.012,97.928,55.133)
N3: (109.945,99.175,54.414)
N6: (108.080,95.729,55.820)
N7: (111.093,95.883,55.235)
N9: (111.966,97.815,54.476)
O5': (115.662,95.989,54.796)
O3': (115.896,99.447,56.005)
Image (generated by PyMOL):