ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A949:A969

Extra

PDB:
ATOM 1 O3' U A 948 -142.843 22.254 -3.351 1.00 31.05 O
ATOM 2 P G A 949 -142.222 21.144 -4.319 1.00 12.29 P
ATOM 3 OP1 G A 949 -142.838 21.344 -5.672 1.00 12.29 O
ATOM 4 OP2 G A 949 -142.378 19.833 -3.642 1.00 12.29 O
ATOM 5 O5' G A 949 -140.683 21.548 -4.366 1.00 12.29 O
ATOM 6 C5' G A 949 -140.239 22.649 -5.142 1.00 12.29 C
ATOM 7 C4' G A 949 -138.743 22.778 -5.093 1.00 12.29 C
ATOM 8 O4' G A 949 -138.296 22.894 -3.718 1.00 12.29 O
ATOM 9 C3' G A 949 -137.966 21.599 -5.621 1.00 12.29 C
ATOM 10 O3' G A 949 -137.907 21.588 -7.030 1.00 12.29 O
ATOM 11 C2' G A 949 -136.608 21.772 -4.954 1.00 12.29 C
ATOM 12 O2' G A 949 -135.810 22.708 -5.666 1.00 12.29 O
ATOM 13 C1' G A 949 -136.997 22.373 -3.597 1.00 12.29 C
ATOM 14 N9 G A 949 -136.985 21.365 -2.529 1.00 12.49 N
ATOM 15 C8 G A 949 -138.044 20.728 -1.915 1.00 12.49 C
ATOM 16 N7 G A 949 -137.685 19.852 -0.992 1.00 12.49 N
ATOM 17 C5 G A 949 -136.290 19.912 -1.015 1.00 12.49 C
ATOM 18 C6 G A 949 -135.322 19.203 -0.259 1.00 12.49 C
ATOM 19 O6 G A 949 -135.536 18.356 0.608 1.00 12.49 O
ATOM 20 N1 G A 949 -134.016 19.572 -0.572 1.00 12.49 N
ATOM 21 C2 G A 949 -133.668 20.504 -1.513 1.00 12.49 C
ATOM 22 N2 G A 949 -132.358 20.737 -1.700 1.00 12.49 N
ATOM 23 N3 G A 949 -134.558 21.168 -2.242 1.00 12.49 N
ATOM 24 C4 G A 949 -135.846 20.838 -1.947 1.00 12.49 C
ATOM 25 P U A 950 -137.389 20.287 -7.808 1.00 12.56 P
ATOM 26 OP1 U A 950 -137.284 20.659 -9.262 1.00 12.56 O
ATOM 27 OP2 U A 950 -138.278 19.156 -7.412 1.00 12.56 O
ATOM 28 O5' U A 950 -135.928 20.069 -7.186 1.00 12.56 O
TER

ATOM 1 O3' C B 968 -134.665 25.561 -3.868 1.00 29.37 O
ATOM 2 P G B 969 -135.134 26.797 -2.962 1.00 17.87 P
ATOM 3 OP1 G B 969 -135.015 28.027 -3.800 1.00 17.87 O
ATOM 4 OP2 G B 969 -134.379 26.728 -1.677 1.00 17.87 O
ATOM 5 O5' G B 969 -136.661 26.458 -2.712 1.00 17.87 O
ATOM 6 C5' G B 969 -137.560 26.362 -3.798 1.00 17.87 C
ATOM 7 C4' G B 969 -138.658 27.382 -3.685 1.00 17.87 C
ATOM 8 O4' G B 969 -139.727 26.846 -2.847 1.00 17.87 O
ATOM 9 C3' G B 969 -138.256 28.731 -3.047 1.00 17.87 C
ATOM 10 O3' G B 969 -138.934 29.808 -3.728 1.00 17.87 O
ATOM 11 C2' G B 969 -138.811 28.593 -1.626 1.00 17.87 C
ATOM 12 O2' G B 969 -139.052 29.810 -0.959 1.00 17.87 O
ATOM 13 C1' G B 969 -140.097 27.839 -1.923 1.00 17.87 C
ATOM 14 N9 G B 969 -140.778 27.232 -0.770 1.00 17.82 N
ATOM 15 C8 G B 969 -140.427 26.829 0.489 1.00 17.82 C
ATOM 16 N7 G B 969 -141.435 26.398 1.216 1.00 17.82 N
ATOM 17 C5 G B 969 -142.519 26.548 0.391 1.00 17.82 C
ATOM 18 C6 G B 969 -143.891 26.271 0.591 1.00 17.82 C
ATOM 19 O6 G B 969 -144.451 25.819 1.598 1.00 17.82 O
ATOM 20 N1 G B 969 -144.626 26.598 -0.554 1.00 17.82 N
ATOM 21 C2 G B 969 -144.100 27.134 -1.730 1.00 17.82 C
ATOM 22 N2 G B 969 -144.918 27.414 -2.763 1.00 17.82 N
ATOM 23 N3 G B 969 -142.827 27.389 -1.906 1.00 17.82 N
ATOM 24 C4 G B 969 -142.118 27.070 -0.814 1.00 17.82 C
ATOM 25 P C B 970 -138.140 31.147 -4.198 1.00 21.92 P
ATOM 26 OP1 C B 970 -136.928 31.298 -3.334 1.00 21.92 O
ATOM 27 OP2 C B 970 -139.129 32.247 -4.220 1.00 21.92 O
ATOM 28 O5' C B 970 -137.703 30.791 -5.678 1.00 21.92 O
TER

Atoms:
OP1: (-142.838,21.344,-5.672)
OP2: (-142.378,19.833,-3.642)
C3': (-137.966,21.599,-5.621)
C1': (-136.997,22.373,-3.597)
C5': (-140.239,22.649,-5.142)
O6: (-135.536,18.356,0.608)
O4': (-138.296,22.894,-3.718)
C8: (-138.044,20.728,-1.915)
C2: (-133.668,20.504,-1.513)
C6: (-135.322,19.203,-0.259)
C5: (-136.290,19.912,-1.015)
C4: (-135.846,20.838,-1.947)
P: (-142.222,21.144,-4.319)
C4': (-138.743,22.778,-5.093)
C2': (-136.608,21.772,-4.954)
O2': (-135.810,22.708,-5.666)
N1: (-134.016,19.572,-0.572)
N2: (-132.358,20.737,-1.700)
N3: (-134.558,21.168,-2.242)
N7: (-137.685,19.852,-0.992)
N9: (-136.985,21.365,-2.529)
O5': (-140.683,21.548,-4.366)
O3': (-137.907,21.588,-7.030)
OP1: (-135.015,28.027,-3.800)
OP2: (-134.379,26.728,-1.677)
C3': (-138.256,28.731,-3.047)
C1': (-140.097,27.839,-1.923)
C5': (-137.560,26.362,-3.798)
O6: (-144.451,25.819,1.598)
O4': (-139.727,26.846,-2.847)
C8: (-140.427,26.829,0.489)
C2: (-144.100,27.134,-1.730)
C6: (-143.891,26.271,0.591)
C5: (-142.519,26.548,0.391)
C4: (-142.118,27.070,-0.814)
P: (-135.134,26.797,-2.962)
C4': (-138.658,27.382,-3.685)
C2': (-138.811,28.593,-1.626)
O2': (-139.052,29.810,-0.959)
N1: (-144.626,26.598,-0.554)
N2: (-144.918,27.414,-2.763)
N3: (-142.827,27.389,-1.906)
N7: (-141.435,26.398,1.216)
N9: (-140.778,27.232,-0.770)
O5': (-136.661,26.458,-2.712)
O3': (-138.934,29.808,-3.728)
Image (generated by PyMOL):
PyMOL image
show in jmol