ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11434:11783

Extra

PDB:
ATOM 1 O3' A A1433 32.253 26.151 118.959 1.00 53.38 O
ATOM 2 P A A1434 33.768 25.616 118.930 1.00 49.62 P
ATOM 3 OP1 A A1434 33.901 24.660 120.049 1.00 49.79 O
ATOM 4 OP2 A A1434 34.636 26.805 118.891 1.00 49.89 O
ATOM 5 O5' A A1434 33.867 24.841 117.550 1.00 48.97 O
ATOM 6 C5' A A1434 33.025 23.750 117.307 1.00 48.66 C
ATOM 7 C4' A A1434 32.994 23.355 115.860 1.00 48.09 C
ATOM 8 O4' A A1434 32.425 24.393 115.039 1.00 48.08 O
ATOM 9 C3' A A1434 34.306 23.065 115.212 1.00 47.80 C
ATOM 10 O3' A A1434 34.813 21.817 115.623 1.00 47.66 O
ATOM 11 C2' A A1434 33.907 23.102 113.745 1.00 47.35 C
ATOM 12 O2' A A1434 33.228 21.923 113.404 1.00 47.01 O
ATOM 13 C1' A A1434 32.888 24.238 113.725 1.00 47.62 C
ATOM 14 N9 A A1434 33.501 25.491 113.305 1.00 47.77 N
ATOM 15 C8 A A1434 33.791 26.571 114.089 1.00 48.26 C
ATOM 16 N7 A A1434 34.399 27.549 113.471 1.00 48.30 N
ATOM 17 C5 A A1434 34.536 27.068 112.180 1.00 47.78 C
ATOM 18 C6 A A1434 35.090 27.626 111.013 1.00 47.56 C
ATOM 19 N6 A A1434 35.627 28.834 110.971 1.00 47.85 N
ATOM 20 N1 A A1434 35.053 26.898 109.875 1.00 47.05 N
ATOM 21 C2 A A1434 34.508 25.693 109.949 1.00 46.80 C
ATOM 22 N3 A A1434 33.948 25.054 110.984 1.00 46.96 N
ATOM 23 C4 A A1434 33.990 25.803 112.078 1.00 47.46 C
ATOM 24 P A A1435 36.381 21.529 115.644 1.00 48.92 P
ATOM 25 OP1 A A1435 36.574 20.089 115.621 1.00 48.62 O
ATOM 26 OP2 A A1435 36.927 22.263 116.751 1.00 49.44 O
ATOM 27 O5' A A1435 36.863 22.152 114.271 1.00 48.61 O
TER

ATOM 1 O3' G B1782 32.539 34.195 108.406 1.00 49.83 O
ATOM 2 P A B1783 31.928 35.548 107.767 1.00 48.50 P
ATOM 3 OP1 A B1783 32.671 36.695 108.270 1.00 48.96 O
ATOM 4 OP2 A B1783 30.461 35.476 108.014 1.00 48.60 O
ATOM 5 O5' A B1783 32.221 35.304 106.202 1.00 48.00 O
ATOM 6 C5' A B1783 32.848 36.255 105.382 1.00 48.04 C
ATOM 7 C4' A B1783 34.061 35.665 104.708 1.00 47.66 C
ATOM 8 O4' A B1783 34.596 34.589 105.502 1.00 47.54 O
ATOM 9 C3' A B1783 33.876 35.041 103.331 1.00 47.13 C
ATOM 10 O3' A B1783 33.828 36.024 102.290 1.00 47.17 O
ATOM 11 C2' A B1783 35.112 34.149 103.227 1.00 46.82 C
ATOM 12 O2' A B1783 36.231 34.944 102.864 1.00 46.94 O
ATOM 13 C1' A B1783 35.320 33.700 104.673 1.00 47.05 C
ATOM 14 N9 A B1783 34.861 32.319 104.953 1.00 46.75 N
ATOM 15 C8 A B1783 33.855 31.525 104.448 1.00 46.43 C
ATOM 16 N7 A B1783 33.682 30.366 105.069 1.00 46.29 N
ATOM 17 C5 A B1783 34.613 30.405 106.073 1.00 46.54 C
ATOM 18 C6 A B1783 34.934 29.498 107.064 1.00 46.56 C
ATOM 19 N6 A B1783 34.340 28.343 107.200 1.00 46.32 N
ATOM 20 N1 A B1783 35.886 29.797 107.924 1.00 46.86 N
ATOM 21 C2 A B1783 36.468 30.980 107.774 1.00 47.12 C
ATOM 22 N3 A B1783 36.287 31.946 106.889 1.00 47.14 N
ATOM 23 C4 A B1783 35.324 31.587 106.033 1.00 46.83 C
ATOM 24 P U B1784 32.673 35.980 101.172 1.00 55.42 P
ATOM 25 OP1 U B1784 32.000 37.290 101.182 1.00 55.84 O
ATOM 26 OP2 U B1784 31.879 34.770 101.437 1.00 55.16 O
ATOM 27 O5' U B1784 33.469 35.816 99.802 1.00 55.03 O
TER

Atoms:
OP1: (33.901,24.660,120.049)
OP2: (34.636,26.805,118.891)
C3': (34.306,23.065,115.212)
C1': (32.888,24.238,113.725)
C5': (33.025,23.750,117.307)
O4': (32.425,24.393,115.039)
C8: (33.791,26.571,114.089)
O2': (33.228,21.923,113.404)
C6: (35.090,27.626,111.013)
C5: (34.536,27.068,112.180)
C4: (33.990,25.803,112.078)
P: (33.768,25.616,118.930)
C4': (32.994,23.355,115.860)
C2': (33.907,23.102,113.745)
C2: (34.508,25.693,109.949)
N1: (35.053,26.898,109.875)
N3: (33.948,25.054,110.984)
N6: (35.627,28.834,110.971)
N7: (34.399,27.549,113.471)
N9: (33.501,25.491,113.305)
O5': (33.867,24.841,117.550)
O3': (34.813,21.817,115.623)
OP1: (32.671,36.695,108.270)
OP2: (30.461,35.476,108.014)
C3': (33.876,35.041,103.331)
C1': (35.320,33.700,104.673)
C5': (32.848,36.255,105.382)
O4': (34.596,34.589,105.502)
C8: (33.855,31.525,104.448)
O2': (36.231,34.944,102.864)
C6: (34.934,29.498,107.064)
C5: (34.613,30.405,106.073)
C4: (35.324,31.587,106.033)
P: (31.928,35.548,107.767)
C4': (34.061,35.665,104.708)
C2': (35.112,34.149,103.227)
C2: (36.468,30.980,107.774)
N1: (35.886,29.797,107.924)
N3: (36.287,31.946,106.889)
N6: (34.340,28.343,107.200)
N7: (33.682,30.366,105.069)
N9: (34.861,32.319,104.953)
O5': (32.221,35.304,106.202)
O3': (33.828,36.024,102.290)
Image (generated by PyMOL):
PyMOL image
show in jmol