Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A474:A499
Extra
PDB:
ATOM 1 O3' A A 473 24.703 162.074 48.996 1.00 54.34 O
ATOM 2 P A A 474 23.967 162.985 47.891 1.00 54.74 P
ATOM 3 OP1 A A 474 23.881 162.257 46.605 1.00 53.78 O
ATOM 4 OP2 A A 474 24.557 164.353 47.930 1.00 54.83 O
ATOM 5 O5' A A 474 22.499 163.109 48.479 1.00 53.08 O
ATOM 6 C5' A A 474 21.736 161.943 48.806 1.00 51.73 C
ATOM 7 C4' A A 474 20.603 162.330 49.715 1.00 53.02 C
ATOM 8 O4' A A 474 19.500 161.395 49.612 1.00 54.14 O
ATOM 9 C3' A A 474 20.962 162.420 51.186 1.00 52.83 C
ATOM 10 O3' A A 474 21.450 163.730 51.477 1.00 53.66 O
ATOM 11 C2' A A 474 19.633 162.099 51.864 1.00 53.11 C
ATOM 12 O2' A A 474 18.743 163.190 51.941 1.00 54.79 O
ATOM 13 C1' A A 474 19.044 161.059 50.905 1.00 53.61 C
ATOM 14 N9 A A 474 19.574 159.741 51.211 1.00 54.18 N
ATOM 15 C8 A A 474 20.523 159.028 50.513 1.00 54.46 C
ATOM 16 N7 A A 474 20.887 157.922 51.099 1.00 53.21 N
ATOM 17 C5 A A 474 20.107 157.889 52.244 1.00 54.21 C
ATOM 18 C6 A A 474 20.044 156.991 53.297 1.00 54.53 C
ATOM 19 N6 A A 474 20.836 155.926 53.392 1.00 54.45 N
ATOM 20 N1 A A 474 19.144 157.232 54.281 1.00 54.84 N
ATOM 21 C2 A A 474 18.383 158.332 54.203 1.00 54.53 C
ATOM 22 N3 A A 474 18.369 159.270 53.272 1.00 54.05 N
ATOM 23 C4 A A 474 19.268 158.985 52.307 1.00 54.17 C
ATOM 24 P G A 475 22.158 164.043 52.890 1.00 55.21 P
ATOM 25 OP1 G A 475 21.729 163.015 53.878 1.00 54.53 O
ATOM 26 OP2 G A 475 21.990 165.471 53.212 1.00 55.37 O
ATOM 27 O5' G A 475 23.699 163.802 52.601 1.00 54.86 O
TER
ATOM 1 O3' U B 498 19.597 149.635 65.661 1.00 78.13 O
ATOM 2 P A B 499 18.909 149.316 64.246 1.00 77.66 P
ATOM 3 OP1 A B 499 17.922 150.405 64.004 1.00 77.71 O
ATOM 4 OP2 A B 499 18.446 147.902 64.290 1.00 78.49 O
ATOM 5 O5' A B 499 20.098 149.463 63.189 1.00 72.48 O
ATOM 6 C5' A B 499 20.853 150.686 63.114 1.00 66.65 C
ATOM 7 C4' A B 499 21.826 150.656 61.958 1.00 62.73 C
ATOM 8 O4' A B 499 21.123 150.425 60.710 1.00 61.73 O
ATOM 9 C3' A B 499 22.544 151.976 61.741 1.00 60.21 C
ATOM 10 O3' A B 499 23.664 152.115 62.602 1.00 57.28 O
ATOM 11 C2' A B 499 22.946 151.890 60.283 1.00 60.05 C
ATOM 12 O2' A B 499 24.094 151.098 60.117 1.00 60.12 O
ATOM 13 C1' A B 499 21.716 151.204 59.675 1.00 60.38 C
ATOM 14 N9 A B 499 20.725 152.178 59.193 1.00 59.82 N
ATOM 15 C8 A B 499 19.579 152.630 59.808 1.00 60.21 C
ATOM 16 N7 A B 499 18.944 153.558 59.132 1.00 59.74 N
ATOM 17 C5 A B 499 19.714 153.720 57.990 1.00 58.94 C
ATOM 18 C6 A B 499 19.590 154.567 56.872 1.00 58.18 C
ATOM 19 N6 A B 499 18.608 155.452 56.705 1.00 57.28 N
ATOM 20 N1 A B 499 20.530 154.471 55.910 1.00 58.49 N
ATOM 21 C2 A B 499 21.517 153.580 56.064 1.00 58.38 C
ATOM 22 N3 A B 499 21.742 152.736 57.062 1.00 58.15 N
ATOM 23 C4 A B 499 20.799 152.861 58.006 1.00 58.79 C
ATOM 24 P G B 500 23.853 153.465 63.442 1.00 55.81 P
ATOM 25 OP1 G B 500 24.997 153.239 64.352 1.00 56.82 O
ATOM 26 OP2 G B 500 22.534 153.861 64.009 1.00 55.23 O
ATOM 27 O5' G B 500 24.282 154.543 62.353 1.00 54.07 O
TER
ATOM 2 P A A 474 23.967 162.985 47.891 1.00 54.74 P
ATOM 3 OP1 A A 474 23.881 162.257 46.605 1.00 53.78 O
ATOM 4 OP2 A A 474 24.557 164.353 47.930 1.00 54.83 O
ATOM 5 O5' A A 474 22.499 163.109 48.479 1.00 53.08 O
ATOM 6 C5' A A 474 21.736 161.943 48.806 1.00 51.73 C
ATOM 7 C4' A A 474 20.603 162.330 49.715 1.00 53.02 C
ATOM 8 O4' A A 474 19.500 161.395 49.612 1.00 54.14 O
ATOM 9 C3' A A 474 20.962 162.420 51.186 1.00 52.83 C
ATOM 10 O3' A A 474 21.450 163.730 51.477 1.00 53.66 O
ATOM 11 C2' A A 474 19.633 162.099 51.864 1.00 53.11 C
ATOM 12 O2' A A 474 18.743 163.190 51.941 1.00 54.79 O
ATOM 13 C1' A A 474 19.044 161.059 50.905 1.00 53.61 C
ATOM 14 N9 A A 474 19.574 159.741 51.211 1.00 54.18 N
ATOM 15 C8 A A 474 20.523 159.028 50.513 1.00 54.46 C
ATOM 16 N7 A A 474 20.887 157.922 51.099 1.00 53.21 N
ATOM 17 C5 A A 474 20.107 157.889 52.244 1.00 54.21 C
ATOM 18 C6 A A 474 20.044 156.991 53.297 1.00 54.53 C
ATOM 19 N6 A A 474 20.836 155.926 53.392 1.00 54.45 N
ATOM 20 N1 A A 474 19.144 157.232 54.281 1.00 54.84 N
ATOM 21 C2 A A 474 18.383 158.332 54.203 1.00 54.53 C
ATOM 22 N3 A A 474 18.369 159.270 53.272 1.00 54.05 N
ATOM 23 C4 A A 474 19.268 158.985 52.307 1.00 54.17 C
ATOM 24 P G A 475 22.158 164.043 52.890 1.00 55.21 P
ATOM 25 OP1 G A 475 21.729 163.015 53.878 1.00 54.53 O
ATOM 26 OP2 G A 475 21.990 165.471 53.212 1.00 55.37 O
ATOM 27 O5' G A 475 23.699 163.802 52.601 1.00 54.86 O
TER
ATOM 1 O3' U B 498 19.597 149.635 65.661 1.00 78.13 O
ATOM 2 P A B 499 18.909 149.316 64.246 1.00 77.66 P
ATOM 3 OP1 A B 499 17.922 150.405 64.004 1.00 77.71 O
ATOM 4 OP2 A B 499 18.446 147.902 64.290 1.00 78.49 O
ATOM 5 O5' A B 499 20.098 149.463 63.189 1.00 72.48 O
ATOM 6 C5' A B 499 20.853 150.686 63.114 1.00 66.65 C
ATOM 7 C4' A B 499 21.826 150.656 61.958 1.00 62.73 C
ATOM 8 O4' A B 499 21.123 150.425 60.710 1.00 61.73 O
ATOM 9 C3' A B 499 22.544 151.976 61.741 1.00 60.21 C
ATOM 10 O3' A B 499 23.664 152.115 62.602 1.00 57.28 O
ATOM 11 C2' A B 499 22.946 151.890 60.283 1.00 60.05 C
ATOM 12 O2' A B 499 24.094 151.098 60.117 1.00 60.12 O
ATOM 13 C1' A B 499 21.716 151.204 59.675 1.00 60.38 C
ATOM 14 N9 A B 499 20.725 152.178 59.193 1.00 59.82 N
ATOM 15 C8 A B 499 19.579 152.630 59.808 1.00 60.21 C
ATOM 16 N7 A B 499 18.944 153.558 59.132 1.00 59.74 N
ATOM 17 C5 A B 499 19.714 153.720 57.990 1.00 58.94 C
ATOM 18 C6 A B 499 19.590 154.567 56.872 1.00 58.18 C
ATOM 19 N6 A B 499 18.608 155.452 56.705 1.00 57.28 N
ATOM 20 N1 A B 499 20.530 154.471 55.910 1.00 58.49 N
ATOM 21 C2 A B 499 21.517 153.580 56.064 1.00 58.38 C
ATOM 22 N3 A B 499 21.742 152.736 57.062 1.00 58.15 N
ATOM 23 C4 A B 499 20.799 152.861 58.006 1.00 58.79 C
ATOM 24 P G B 500 23.853 153.465 63.442 1.00 55.81 P
ATOM 25 OP1 G B 500 24.997 153.239 64.352 1.00 56.82 O
ATOM 26 OP2 G B 500 22.534 153.861 64.009 1.00 55.23 O
ATOM 27 O5' G B 500 24.282 154.543 62.353 1.00 54.07 O
TER
Atoms:
OP1: (23.881,162.257,46.605)
OP2: (24.557,164.353,47.930)
C3': (20.962,162.420,51.186)
C1': (19.044,161.059,50.905)
C5': (21.736,161.943,48.806)
O4': (19.500,161.395,49.612)
C8: (20.523,159.028,50.513)
O2': (18.743,163.190,51.941)
C6: (20.044,156.991,53.297)
C5: (20.107,157.889,52.244)
C4: (19.268,158.985,52.307)
P: (23.967,162.985,47.891)
C4': (20.603,162.330,49.715)
C2': (19.633,162.099,51.864)
C2: (18.383,158.332,54.203)
N1: (19.144,157.232,54.281)
N3: (18.369,159.270,53.272)
N6: (20.836,155.926,53.392)
N7: (20.887,157.922,51.099)
N9: (19.574,159.741,51.211)
O5': (22.499,163.109,48.479)
O3': (21.450,163.730,51.477)
OP2: (24.557,164.353,47.930)
C3': (20.962,162.420,51.186)
C1': (19.044,161.059,50.905)
C5': (21.736,161.943,48.806)
O4': (19.500,161.395,49.612)
C8: (20.523,159.028,50.513)
O2': (18.743,163.190,51.941)
C6: (20.044,156.991,53.297)
C5: (20.107,157.889,52.244)
C4: (19.268,158.985,52.307)
P: (23.967,162.985,47.891)
C4': (20.603,162.330,49.715)
C2': (19.633,162.099,51.864)
C2: (18.383,158.332,54.203)
N1: (19.144,157.232,54.281)
N3: (18.369,159.270,53.272)
N6: (20.836,155.926,53.392)
N7: (20.887,157.922,51.099)
N9: (19.574,159.741,51.211)
O5': (22.499,163.109,48.479)
O3': (21.450,163.730,51.477)
OP1: (17.922,150.405,64.004)
OP2: (18.446,147.902,64.290)
C3': (22.544,151.976,61.741)
C1': (21.716,151.204,59.675)
C5': (20.853,150.686,63.114)
O4': (21.123,150.425,60.710)
C8: (19.579,152.630,59.808)
O2': (24.094,151.098,60.117)
C6: (19.590,154.567,56.872)
C5: (19.714,153.720,57.990)
C4: (20.799,152.861,58.006)
P: (18.909,149.316,64.246)
C4': (21.826,150.656,61.958)
C2': (22.946,151.890,60.283)
C2: (21.517,153.580,56.064)
N1: (20.530,154.471,55.910)
N3: (21.742,152.736,57.062)
N6: (18.608,155.452,56.705)
N7: (18.944,153.558,59.132)
N9: (20.725,152.178,59.193)
O5': (20.098,149.463,63.189)
O3': (23.664,152.115,62.602)
OP2: (18.446,147.902,64.290)
C3': (22.544,151.976,61.741)
C1': (21.716,151.204,59.675)
C5': (20.853,150.686,63.114)
O4': (21.123,150.425,60.710)
C8: (19.579,152.630,59.808)
O2': (24.094,151.098,60.117)
C6: (19.590,154.567,56.872)
C5: (19.714,153.720,57.990)
C4: (20.799,152.861,58.006)
P: (18.909,149.316,64.246)
C4': (21.826,150.656,61.958)
C2': (22.946,151.890,60.283)
C2: (21.517,153.580,56.064)
N1: (20.530,154.471,55.910)
N3: (21.742,152.736,57.062)
N6: (18.608,155.452,56.705)
N7: (18.944,153.558,59.132)
N9: (20.725,152.178,59.193)
O5': (20.098,149.463,63.189)
O3': (23.664,152.115,62.602)
Image (generated by PyMOL):