ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A417:A438

Extra

PDB:
ATOM 1 O3' A A 416 -73.401 -21.085 90.789 1.00 40.23 O
ATOM 2 P A A 417 -72.266 -21.231 91.923 1.00 66.24 P
ATOM 3 OP1 A A 417 -72.220 -19.941 92.666 1.00 85.54 O
ATOM 4 OP2 A A 417 -71.028 -21.751 91.290 1.00 85.63 O
ATOM 5 O5' A A 417 -72.838 -22.366 92.885 1.00 93.45 O
ATOM 6 C5' A A 417 -74.145 -22.242 93.483 1.00 93.45 C
ATOM 7 C4' A A 417 -74.680 -23.601 93.879 1.00 93.45 C
ATOM 8 O4' A A 417 -74.895 -24.403 92.688 1.00 93.45 O
ATOM 9 C3' A A 417 -73.778 -24.456 94.760 1.00 93.45 C
ATOM 10 O3' A A 417 -73.911 -24.130 96.144 1.00 93.45 O
ATOM 11 C2' A A 417 -74.259 -25.870 94.450 1.00 93.45 C
ATOM 12 O2' A A 417 -75.430 -26.221 95.159 1.00 93.45 O
ATOM 13 C1' A A 417 -74.602 -25.765 92.964 1.00 93.45 C
ATOM 14 N9 A A 417 -73.498 -26.197 92.096 1.00 54.43 N
ATOM 15 C8 A A 417 -72.713 -25.430 91.264 1.00 54.38 C
ATOM 16 N7 A A 417 -71.803 -26.114 90.613 1.00 54.34 N
ATOM 17 C5 A A 417 -71.994 -27.416 91.047 1.00 54.33 C
ATOM 18 C6 A A 417 -71.338 -28.616 90.737 1.00 54.30 C
ATOM 19 N6 A A 417 -70.313 -28.702 89.890 1.00 54.31 N
ATOM 20 N1 A A 417 -71.775 -29.741 91.338 1.00 54.33 N
ATOM 21 C2 A A 417 -72.798 -29.655 92.193 1.00 54.37 C
ATOM 22 N3 A A 417 -73.492 -28.588 92.571 1.00 54.39 N
ATOM 23 C4 A A 417 -73.036 -27.485 91.955 1.00 54.40 C
ATOM 24 P U A 418 -72.740 -24.533 97.182 1.00 82.75 P
ATOM 25 OP1 U A 418 -73.273 -24.277 98.545 1.00 61.46 O
ATOM 26 OP2 U A 418 -71.454 -23.908 96.766 1.00 61.49 O
ATOM 27 O5' U A 418 -72.610 -26.110 97.021 1.00 84.05 O
TER

ATOM 1 O3' A B 437 -69.156 -39.470 86.423 1.00 35.12 O
ATOM 2 P A B 438 -67.606 -39.288 86.785 1.00 32.10 P
ATOM 3 OP1 A B 438 -66.892 -40.415 86.125 1.00 68.07 O
ATOM 4 OP2 A B 438 -67.445 -39.072 88.244 1.00 68.01 O
ATOM 5 O5' A B 438 -67.207 -37.941 86.038 1.00 20.89 O
ATOM 6 C5' A B 438 -67.178 -37.888 84.603 1.00 20.89 C
ATOM 7 C4' A B 438 -67.232 -36.466 84.142 1.00 20.89 C
ATOM 8 O4' A B 438 -68.455 -35.881 84.635 1.00 20.89 O
ATOM 9 C3' A B 438 -66.120 -35.585 84.680 1.00 20.89 C
ATOM 10 O3' A B 438 -64.986 -35.631 83.820 1.00 20.89 O
ATOM 11 C2' A B 438 -66.758 -34.202 84.692 1.00 20.89 C
ATOM 12 O2' A B 438 -66.645 -33.544 83.449 1.00 20.89 O
ATOM 13 C1' A B 438 -68.226 -34.529 84.979 1.00 20.89 C
ATOM 14 N9 A B 438 -68.618 -34.338 86.373 1.00 39.60 N
ATOM 15 C8 A B 438 -68.856 -35.300 87.317 1.00 39.95 C
ATOM 16 N7 A B 438 -69.210 -34.821 88.480 1.00 40.21 N
ATOM 17 C5 A B 438 -69.190 -33.448 88.294 1.00 40.14 C
ATOM 18 C6 A B 438 -69.458 -32.381 89.155 1.00 40.04 C
ATOM 19 N6 A B 438 -69.776 -32.537 90.442 1.00 39.91 N
ATOM 20 N1 A B 438 -69.379 -31.132 88.650 1.00 39.98 N
ATOM 21 C2 A B 438 -69.031 -30.981 87.370 1.00 39.98 C
ATOM 22 N3 A B 438 -68.732 -31.905 86.468 1.00 39.96 N
ATOM 23 C4 A B 438 -68.835 -33.136 87.000 1.00 39.92 C
ATOM 24 P G B 439 -63.514 -35.331 84.409 1.00 51.67 P
ATOM 25 OP1 G B 439 -63.544 -34.019 85.099 1.00 56.21 O
ATOM 26 OP2 G B 439 -62.512 -35.564 83.336 1.00 55.93 O
ATOM 27 O5' G B 439 -63.312 -36.469 85.501 1.00 33.98 O
TER

Atoms:
OP1: (-72.220,-19.941,92.666)
OP2: (-71.028,-21.751,91.290)
C3': (-73.778,-24.456,94.760)
C1': (-74.602,-25.765,92.964)
C5': (-74.145,-22.242,93.483)
O4': (-74.895,-24.403,92.688)
C8: (-72.713,-25.430,91.264)
O2': (-75.430,-26.221,95.159)
C6: (-71.338,-28.616,90.737)
C5: (-71.994,-27.416,91.047)
C4: (-73.036,-27.485,91.955)
P: (-72.266,-21.231,91.923)
C4': (-74.680,-23.601,93.879)
C2': (-74.259,-25.870,94.450)
C2: (-72.798,-29.655,92.193)
N1: (-71.775,-29.741,91.338)
N3: (-73.492,-28.588,92.571)
N6: (-70.313,-28.702,89.890)
N7: (-71.803,-26.114,90.613)
N9: (-73.498,-26.197,92.096)
O5': (-72.838,-22.366,92.885)
O3': (-73.911,-24.130,96.144)
OP1: (-66.892,-40.415,86.125)
OP2: (-67.445,-39.072,88.244)
C3': (-66.120,-35.585,84.680)
C1': (-68.226,-34.529,84.979)
C5': (-67.178,-37.888,84.603)
O4': (-68.455,-35.881,84.635)
C8: (-68.856,-35.300,87.317)
O2': (-66.645,-33.544,83.449)
C6: (-69.458,-32.381,89.155)
C5: (-69.190,-33.448,88.294)
C4: (-68.835,-33.136,87.000)
P: (-67.606,-39.288,86.785)
C4': (-67.232,-36.466,84.142)
C2': (-66.758,-34.202,84.692)
C2: (-69.031,-30.981,87.370)
N1: (-69.379,-31.132,88.650)
N3: (-68.732,-31.905,86.468)
N6: (-69.776,-32.537,90.442)
N7: (-69.210,-34.821,88.480)
N9: (-68.618,-34.338,86.373)
O5': (-67.207,-37.941,86.038)
O3': (-64.986,-35.631,83.820)
Image (generated by PyMOL):
PyMOL image
show in jmol