Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A192:A424
Extra
PDB:
ATOM 1 O3' G A 191 64.633 97.696 16.741 1.00 58.53 O
ATOM 2 P A A 192 64.227 99.258 16.615 1.00 59.43 P
ATOM 3 OP1 A A 192 62.934 99.541 17.295 1.00 58.33 O
ATOM 4 OP2 A A 192 64.425 99.715 15.207 1.00 58.26 O
ATOM 5 O5' A A 192 65.311 99.971 17.535 1.00 58.32 O
ATOM 6 C5' A A 192 66.705 99.605 17.477 1.00 55.32 C
ATOM 7 C4' A A 192 67.557 100.790 17.857 1.00 53.31 C
ATOM 8 O4' A A 192 67.290 101.837 16.891 1.00 51.89 O
ATOM 9 C3' A A 192 67.225 101.449 19.192 1.00 52.43 C
ATOM 10 O3' A A 192 67.814 100.836 20.340 1.00 52.09 O
ATOM 11 C2' A A 192 67.708 102.873 18.978 1.00 51.64 C
ATOM 12 O2' A A 192 69.114 103.052 19.054 1.00 53.03 O
ATOM 13 C1' A A 192 67.279 103.095 17.538 1.00 50.81 C
ATOM 14 N9 A A 192 65.935 103.636 17.459 1.00 48.78 N
ATOM 15 C8 A A 192 64.819 103.041 16.938 1.00 49.16 C
ATOM 16 N7 A A 192 63.756 103.806 16.947 1.00 48.89 N
ATOM 17 C5 A A 192 64.203 104.980 17.531 1.00 48.70 C
ATOM 18 C6 A A 192 63.558 106.184 17.805 1.00 49.13 C
ATOM 19 N6 A A 192 62.276 106.406 17.501 1.00 49.44 N
ATOM 20 N1 A A 192 64.274 107.159 18.397 1.00 47.06 N
ATOM 21 C2 A A 192 65.559 106.917 18.681 1.00 47.68 C
ATOM 22 N3 A A 192 66.284 105.823 18.462 1.00 47.60 N
ATOM 23 C4 A A 192 65.538 104.881 17.872 1.00 48.74 C
ATOM 24 P U A 193 66.994 100.816 21.732 1.00 50.96 P
ATOM 25 OP1 U A 193 67.830 100.170 22.796 1.00 50.01 O
ATOM 26 OP2 U A 193 65.639 100.303 21.454 1.00 51.39 O
ATOM 27 O5' U A 193 66.792 102.354 22.072 1.00 50.58 O
TER
ATOM 1 O3' A B 423 60.944 117.525 16.945 1.00 55.17 O
ATOM 2 P A B 424 60.162 117.387 18.336 1.00 55.23 P
ATOM 3 OP1 A B 424 59.214 118.520 18.520 1.00 56.08 O
ATOM 4 OP2 A B 424 61.152 117.085 19.395 1.00 56.55 O
ATOM 5 O5' A B 424 59.264 116.111 18.067 1.00 55.25 O
ATOM 6 C5' A B 424 58.083 116.228 17.264 1.00 53.93 C
ATOM 7 C4' A B 424 57.258 114.987 17.405 1.00 52.91 C
ATOM 8 O4' A B 424 58.003 113.874 16.853 1.00 51.30 O
ATOM 9 C3' A B 424 56.968 114.584 18.842 1.00 51.87 C
ATOM 10 O3' A B 424 55.835 115.287 19.348 1.00 52.46 O
ATOM 11 C2' A B 424 56.766 113.082 18.726 1.00 50.29 C
ATOM 12 O2' A B 424 55.494 112.751 18.203 1.00 50.41 O
ATOM 13 C1' A B 424 57.794 112.730 17.652 1.00 49.67 C
ATOM 14 N9 A B 424 59.096 112.287 18.122 1.00 47.89 N
ATOM 15 C8 A B 424 60.161 113.064 18.473 1.00 48.13 C
ATOM 16 N7 A B 424 61.251 112.379 18.726 1.00 48.32 N
ATOM 17 C5 A B 424 60.862 111.060 18.556 1.00 45.95 C
ATOM 18 C6 A B 424 61.565 109.847 18.661 1.00 45.18 C
ATOM 19 N6 A B 424 62.864 109.773 18.950 1.00 42.60 N
ATOM 20 N1 A B 424 60.880 108.705 18.452 1.00 44.98 N
ATOM 21 C2 A B 424 59.582 108.794 18.154 1.00 45.51 C
ATOM 22 N3 A B 424 58.815 109.876 18.012 1.00 44.91 N
ATOM 23 C4 A B 424 59.526 110.988 18.225 1.00 46.03 C
ATOM 24 P A B 425 55.728 115.585 20.923 1.00 54.44 P
ATOM 25 OP1 A B 425 54.520 116.417 21.179 1.00 54.29 O
ATOM 26 OP2 A B 425 57.047 116.033 21.439 1.00 55.00 O
ATOM 27 O5' A B 425 55.433 114.148 21.530 1.00 53.92 O
TER
ATOM 2 P A A 192 64.227 99.258 16.615 1.00 59.43 P
ATOM 3 OP1 A A 192 62.934 99.541 17.295 1.00 58.33 O
ATOM 4 OP2 A A 192 64.425 99.715 15.207 1.00 58.26 O
ATOM 5 O5' A A 192 65.311 99.971 17.535 1.00 58.32 O
ATOM 6 C5' A A 192 66.705 99.605 17.477 1.00 55.32 C
ATOM 7 C4' A A 192 67.557 100.790 17.857 1.00 53.31 C
ATOM 8 O4' A A 192 67.290 101.837 16.891 1.00 51.89 O
ATOM 9 C3' A A 192 67.225 101.449 19.192 1.00 52.43 C
ATOM 10 O3' A A 192 67.814 100.836 20.340 1.00 52.09 O
ATOM 11 C2' A A 192 67.708 102.873 18.978 1.00 51.64 C
ATOM 12 O2' A A 192 69.114 103.052 19.054 1.00 53.03 O
ATOM 13 C1' A A 192 67.279 103.095 17.538 1.00 50.81 C
ATOM 14 N9 A A 192 65.935 103.636 17.459 1.00 48.78 N
ATOM 15 C8 A A 192 64.819 103.041 16.938 1.00 49.16 C
ATOM 16 N7 A A 192 63.756 103.806 16.947 1.00 48.89 N
ATOM 17 C5 A A 192 64.203 104.980 17.531 1.00 48.70 C
ATOM 18 C6 A A 192 63.558 106.184 17.805 1.00 49.13 C
ATOM 19 N6 A A 192 62.276 106.406 17.501 1.00 49.44 N
ATOM 20 N1 A A 192 64.274 107.159 18.397 1.00 47.06 N
ATOM 21 C2 A A 192 65.559 106.917 18.681 1.00 47.68 C
ATOM 22 N3 A A 192 66.284 105.823 18.462 1.00 47.60 N
ATOM 23 C4 A A 192 65.538 104.881 17.872 1.00 48.74 C
ATOM 24 P U A 193 66.994 100.816 21.732 1.00 50.96 P
ATOM 25 OP1 U A 193 67.830 100.170 22.796 1.00 50.01 O
ATOM 26 OP2 U A 193 65.639 100.303 21.454 1.00 51.39 O
ATOM 27 O5' U A 193 66.792 102.354 22.072 1.00 50.58 O
TER
ATOM 1 O3' A B 423 60.944 117.525 16.945 1.00 55.17 O
ATOM 2 P A B 424 60.162 117.387 18.336 1.00 55.23 P
ATOM 3 OP1 A B 424 59.214 118.520 18.520 1.00 56.08 O
ATOM 4 OP2 A B 424 61.152 117.085 19.395 1.00 56.55 O
ATOM 5 O5' A B 424 59.264 116.111 18.067 1.00 55.25 O
ATOM 6 C5' A B 424 58.083 116.228 17.264 1.00 53.93 C
ATOM 7 C4' A B 424 57.258 114.987 17.405 1.00 52.91 C
ATOM 8 O4' A B 424 58.003 113.874 16.853 1.00 51.30 O
ATOM 9 C3' A B 424 56.968 114.584 18.842 1.00 51.87 C
ATOM 10 O3' A B 424 55.835 115.287 19.348 1.00 52.46 O
ATOM 11 C2' A B 424 56.766 113.082 18.726 1.00 50.29 C
ATOM 12 O2' A B 424 55.494 112.751 18.203 1.00 50.41 O
ATOM 13 C1' A B 424 57.794 112.730 17.652 1.00 49.67 C
ATOM 14 N9 A B 424 59.096 112.287 18.122 1.00 47.89 N
ATOM 15 C8 A B 424 60.161 113.064 18.473 1.00 48.13 C
ATOM 16 N7 A B 424 61.251 112.379 18.726 1.00 48.32 N
ATOM 17 C5 A B 424 60.862 111.060 18.556 1.00 45.95 C
ATOM 18 C6 A B 424 61.565 109.847 18.661 1.00 45.18 C
ATOM 19 N6 A B 424 62.864 109.773 18.950 1.00 42.60 N
ATOM 20 N1 A B 424 60.880 108.705 18.452 1.00 44.98 N
ATOM 21 C2 A B 424 59.582 108.794 18.154 1.00 45.51 C
ATOM 22 N3 A B 424 58.815 109.876 18.012 1.00 44.91 N
ATOM 23 C4 A B 424 59.526 110.988 18.225 1.00 46.03 C
ATOM 24 P A B 425 55.728 115.585 20.923 1.00 54.44 P
ATOM 25 OP1 A B 425 54.520 116.417 21.179 1.00 54.29 O
ATOM 26 OP2 A B 425 57.047 116.033 21.439 1.00 55.00 O
ATOM 27 O5' A B 425 55.433 114.148 21.530 1.00 53.92 O
TER
Atoms:
OP1: (62.934,99.541,17.295)
OP2: (64.425,99.715,15.207)
C3': (67.225,101.449,19.192)
C1': (67.279,103.095,17.538)
C5': (66.705,99.605,17.477)
O4': (67.290,101.837,16.891)
C8: (64.819,103.041,16.938)
O2': (69.114,103.052,19.054)
C6: (63.558,106.184,17.805)
C5: (64.203,104.980,17.531)
C4: (65.538,104.881,17.872)
P: (64.227,99.258,16.615)
C4': (67.557,100.790,17.857)
C2': (67.708,102.873,18.978)
C2: (65.559,106.917,18.681)
N1: (64.274,107.159,18.397)
N3: (66.284,105.823,18.462)
N6: (62.276,106.406,17.501)
N7: (63.756,103.806,16.947)
N9: (65.935,103.636,17.459)
O5': (65.311,99.971,17.535)
O3': (67.814,100.836,20.340)
OP2: (64.425,99.715,15.207)
C3': (67.225,101.449,19.192)
C1': (67.279,103.095,17.538)
C5': (66.705,99.605,17.477)
O4': (67.290,101.837,16.891)
C8: (64.819,103.041,16.938)
O2': (69.114,103.052,19.054)
C6: (63.558,106.184,17.805)
C5: (64.203,104.980,17.531)
C4: (65.538,104.881,17.872)
P: (64.227,99.258,16.615)
C4': (67.557,100.790,17.857)
C2': (67.708,102.873,18.978)
C2: (65.559,106.917,18.681)
N1: (64.274,107.159,18.397)
N3: (66.284,105.823,18.462)
N6: (62.276,106.406,17.501)
N7: (63.756,103.806,16.947)
N9: (65.935,103.636,17.459)
O5': (65.311,99.971,17.535)
O3': (67.814,100.836,20.340)
OP1: (59.214,118.520,18.520)
OP2: (61.152,117.085,19.395)
C3': (56.968,114.584,18.842)
C1': (57.794,112.730,17.652)
C5': (58.083,116.228,17.264)
O4': (58.003,113.874,16.853)
C8: (60.161,113.064,18.473)
O2': (55.494,112.751,18.203)
C6: (61.565,109.847,18.661)
C5: (60.862,111.060,18.556)
C4: (59.526,110.988,18.225)
P: (60.162,117.387,18.336)
C4': (57.258,114.987,17.405)
C2': (56.766,113.082,18.726)
C2: (59.582,108.794,18.154)
N1: (60.880,108.705,18.452)
N3: (58.815,109.876,18.012)
N6: (62.864,109.773,18.950)
N7: (61.251,112.379,18.726)
N9: (59.096,112.287,18.122)
O5': (59.264,116.111,18.067)
O3': (55.835,115.287,19.348)
OP2: (61.152,117.085,19.395)
C3': (56.968,114.584,18.842)
C1': (57.794,112.730,17.652)
C5': (58.083,116.228,17.264)
O4': (58.003,113.874,16.853)
C8: (60.161,113.064,18.473)
O2': (55.494,112.751,18.203)
C6: (61.565,109.847,18.661)
C5: (60.862,111.060,18.556)
C4: (59.526,110.988,18.225)
P: (60.162,117.387,18.336)
C4': (57.258,114.987,17.405)
C2': (56.766,113.082,18.726)
C2: (59.582,108.794,18.154)
N1: (60.880,108.705,18.452)
N3: (58.815,109.876,18.012)
N6: (62.864,109.773,18.950)
N7: (61.251,112.379,18.726)
N9: (59.096,112.287,18.122)
O5': (59.264,116.111,18.067)
O3': (55.835,115.287,19.348)
Image (generated by PyMOL):