Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A50:A76
Extra
PDB:
ATOM 1 O3' A A 49 51.793 164.021 46.567 1.00 55.80 O
ATOM 2 P A A 50 53.279 164.124 47.222 1.00 53.11 P
ATOM 3 OP1 A A 50 53.668 165.537 47.486 1.00 52.59 O
ATOM 4 OP2 A A 50 54.235 163.234 46.511 1.00 54.01 O
ATOM 5 O5' A A 50 52.999 163.462 48.637 1.00 52.06 O
ATOM 6 C5' A A 50 54.022 162.829 49.411 1.00 49.77 C
ATOM 7 C4' A A 50 53.420 161.681 50.194 1.00 49.58 C
ATOM 8 O4' A A 50 52.102 162.055 50.688 1.00 50.13 O
ATOM 9 C3' A A 50 53.165 160.416 49.401 1.00 47.73 C
ATOM 10 O3' A A 50 54.384 159.705 49.352 1.00 48.62 O
ATOM 11 C2' A A 50 52.093 159.732 50.236 1.00 46.94 C
ATOM 12 O2' A A 50 52.609 159.145 51.407 1.00 44.77 O
ATOM 13 C1' A A 50 51.234 160.935 50.629 1.00 48.56 C
ATOM 14 N9 A A 50 50.233 161.203 49.599 1.00 50.13 N
ATOM 15 C8 A A 50 50.147 162.250 48.717 1.00 49.24 C
ATOM 16 N7 A A 50 49.158 162.138 47.865 1.00 49.45 N
ATOM 17 C5 A A 50 48.546 160.941 48.215 1.00 51.29 C
ATOM 18 C6 A A 50 47.445 160.233 47.677 1.00 52.21 C
ATOM 19 N6 A A 50 46.744 160.639 46.619 1.00 53.03 N
ATOM 20 N1 A A 50 47.090 159.076 48.274 1.00 52.42 N
ATOM 21 C2 A A 50 47.796 158.663 49.334 1.00 51.32 C
ATOM 22 N3 A A 50 48.853 159.229 49.919 1.00 50.82 N
ATOM 23 C4 A A 50 49.180 160.374 49.301 1.00 50.55 C
ATOM 24 P G A 51 54.610 158.579 48.247 1.00 48.54 P
ATOM 25 OP1 G A 51 55.950 158.052 48.560 1.00 50.42 O
ATOM 26 OP2 G A 51 54.323 159.089 46.884 1.00 48.13 O
ATOM 27 O5' G A 51 53.512 157.493 48.614 1.00 49.94 O
TER
ATOM 1 O3' C B 75 39.064 152.542 42.550 1.00 72.52 O
ATOM 2 P A B 76 38.162 153.300 43.644 1.00 75.63 P
ATOM 3 OP1 A B 76 38.926 153.250 44.917 1.00 76.70 O
ATOM 4 OP2 A B 76 36.793 152.723 43.595 1.00 76.85 O
ATOM 5 O5' A B 76 38.120 154.818 43.136 1.00 76.39 O
ATOM 6 C5' A B 76 37.149 155.763 43.655 1.00 77.13 C
ATOM 7 C4' A B 76 37.689 157.179 43.586 1.00 78.53 C
ATOM 8 O4' A B 76 38.731 157.362 44.584 1.00 78.66 O
ATOM 9 C3' A B 76 38.305 157.616 42.260 1.00 79.75 C
ATOM 10 O3' A B 76 38.081 159.012 42.100 1.00 82.11 O
ATOM 11 C2' A B 76 39.794 157.383 42.492 1.00 79.35 C
ATOM 12 O2' A B 76 40.610 158.193 41.666 1.00 79.56 O
ATOM 13 C1' A B 76 39.915 157.819 43.948 1.00 78.41 C
ATOM 14 N9 A B 76 41.077 157.293 44.665 1.00 76.79 N
ATOM 15 C8 A B 76 41.328 156.010 45.088 1.00 75.92 C
ATOM 16 N7 A B 76 42.449 155.886 45.760 1.00 75.21 N
ATOM 17 C5 A B 76 42.982 157.170 45.762 1.00 75.50 C
ATOM 18 C6 A B 76 44.161 157.718 46.317 1.00 74.89 C
ATOM 19 N6 A B 76 45.056 157.014 47.012 1.00 74.36 N
ATOM 20 N1 A B 76 44.388 159.039 46.131 1.00 75.23 N
ATOM 21 C2 A B 76 43.488 159.754 45.441 1.00 75.61 C
ATOM 22 N3 A B 76 42.349 159.358 44.879 1.00 75.53 N
ATOM 23 C4 A B 76 42.152 158.043 45.079 1.00 76.04 C
ATOM 24 P C B 77 36.937 159.519 41.100 1.00 84.51 P
ATOM 25 OP1 C B 77 36.622 158.369 40.205 1.00 83.07 O
ATOM 26 OP2 C B 77 37.342 160.830 40.503 1.00 83.05 O
ATOM 27 O5' C B 77 35.681 159.759 42.053 1.00 84.14 O
TER
ATOM 2 P A A 50 53.279 164.124 47.222 1.00 53.11 P
ATOM 3 OP1 A A 50 53.668 165.537 47.486 1.00 52.59 O
ATOM 4 OP2 A A 50 54.235 163.234 46.511 1.00 54.01 O
ATOM 5 O5' A A 50 52.999 163.462 48.637 1.00 52.06 O
ATOM 6 C5' A A 50 54.022 162.829 49.411 1.00 49.77 C
ATOM 7 C4' A A 50 53.420 161.681 50.194 1.00 49.58 C
ATOM 8 O4' A A 50 52.102 162.055 50.688 1.00 50.13 O
ATOM 9 C3' A A 50 53.165 160.416 49.401 1.00 47.73 C
ATOM 10 O3' A A 50 54.384 159.705 49.352 1.00 48.62 O
ATOM 11 C2' A A 50 52.093 159.732 50.236 1.00 46.94 C
ATOM 12 O2' A A 50 52.609 159.145 51.407 1.00 44.77 O
ATOM 13 C1' A A 50 51.234 160.935 50.629 1.00 48.56 C
ATOM 14 N9 A A 50 50.233 161.203 49.599 1.00 50.13 N
ATOM 15 C8 A A 50 50.147 162.250 48.717 1.00 49.24 C
ATOM 16 N7 A A 50 49.158 162.138 47.865 1.00 49.45 N
ATOM 17 C5 A A 50 48.546 160.941 48.215 1.00 51.29 C
ATOM 18 C6 A A 50 47.445 160.233 47.677 1.00 52.21 C
ATOM 19 N6 A A 50 46.744 160.639 46.619 1.00 53.03 N
ATOM 20 N1 A A 50 47.090 159.076 48.274 1.00 52.42 N
ATOM 21 C2 A A 50 47.796 158.663 49.334 1.00 51.32 C
ATOM 22 N3 A A 50 48.853 159.229 49.919 1.00 50.82 N
ATOM 23 C4 A A 50 49.180 160.374 49.301 1.00 50.55 C
ATOM 24 P G A 51 54.610 158.579 48.247 1.00 48.54 P
ATOM 25 OP1 G A 51 55.950 158.052 48.560 1.00 50.42 O
ATOM 26 OP2 G A 51 54.323 159.089 46.884 1.00 48.13 O
ATOM 27 O5' G A 51 53.512 157.493 48.614 1.00 49.94 O
TER
ATOM 1 O3' C B 75 39.064 152.542 42.550 1.00 72.52 O
ATOM 2 P A B 76 38.162 153.300 43.644 1.00 75.63 P
ATOM 3 OP1 A B 76 38.926 153.250 44.917 1.00 76.70 O
ATOM 4 OP2 A B 76 36.793 152.723 43.595 1.00 76.85 O
ATOM 5 O5' A B 76 38.120 154.818 43.136 1.00 76.39 O
ATOM 6 C5' A B 76 37.149 155.763 43.655 1.00 77.13 C
ATOM 7 C4' A B 76 37.689 157.179 43.586 1.00 78.53 C
ATOM 8 O4' A B 76 38.731 157.362 44.584 1.00 78.66 O
ATOM 9 C3' A B 76 38.305 157.616 42.260 1.00 79.75 C
ATOM 10 O3' A B 76 38.081 159.012 42.100 1.00 82.11 O
ATOM 11 C2' A B 76 39.794 157.383 42.492 1.00 79.35 C
ATOM 12 O2' A B 76 40.610 158.193 41.666 1.00 79.56 O
ATOM 13 C1' A B 76 39.915 157.819 43.948 1.00 78.41 C
ATOM 14 N9 A B 76 41.077 157.293 44.665 1.00 76.79 N
ATOM 15 C8 A B 76 41.328 156.010 45.088 1.00 75.92 C
ATOM 16 N7 A B 76 42.449 155.886 45.760 1.00 75.21 N
ATOM 17 C5 A B 76 42.982 157.170 45.762 1.00 75.50 C
ATOM 18 C6 A B 76 44.161 157.718 46.317 1.00 74.89 C
ATOM 19 N6 A B 76 45.056 157.014 47.012 1.00 74.36 N
ATOM 20 N1 A B 76 44.388 159.039 46.131 1.00 75.23 N
ATOM 21 C2 A B 76 43.488 159.754 45.441 1.00 75.61 C
ATOM 22 N3 A B 76 42.349 159.358 44.879 1.00 75.53 N
ATOM 23 C4 A B 76 42.152 158.043 45.079 1.00 76.04 C
ATOM 24 P C B 77 36.937 159.519 41.100 1.00 84.51 P
ATOM 25 OP1 C B 77 36.622 158.369 40.205 1.00 83.07 O
ATOM 26 OP2 C B 77 37.342 160.830 40.503 1.00 83.05 O
ATOM 27 O5' C B 77 35.681 159.759 42.053 1.00 84.14 O
TER
Atoms:
OP1: (53.668,165.537,47.486)
OP2: (54.235,163.234,46.511)
C3': (53.165,160.416,49.401)
C1': (51.234,160.935,50.629)
C5': (54.022,162.829,49.411)
O4': (52.102,162.055,50.688)
C8: (50.147,162.250,48.717)
O2': (52.609,159.145,51.407)
C6: (47.445,160.233,47.677)
C5: (48.546,160.941,48.215)
C4: (49.180,160.374,49.301)
P: (53.279,164.124,47.222)
C4': (53.420,161.681,50.194)
C2': (52.093,159.732,50.236)
C2: (47.796,158.663,49.334)
N1: (47.090,159.076,48.274)
N3: (48.853,159.229,49.919)
N6: (46.744,160.639,46.619)
N7: (49.158,162.138,47.865)
N9: (50.233,161.203,49.599)
O5': (52.999,163.462,48.637)
O3': (54.384,159.705,49.352)
OP2: (54.235,163.234,46.511)
C3': (53.165,160.416,49.401)
C1': (51.234,160.935,50.629)
C5': (54.022,162.829,49.411)
O4': (52.102,162.055,50.688)
C8: (50.147,162.250,48.717)
O2': (52.609,159.145,51.407)
C6: (47.445,160.233,47.677)
C5: (48.546,160.941,48.215)
C4: (49.180,160.374,49.301)
P: (53.279,164.124,47.222)
C4': (53.420,161.681,50.194)
C2': (52.093,159.732,50.236)
C2: (47.796,158.663,49.334)
N1: (47.090,159.076,48.274)
N3: (48.853,159.229,49.919)
N6: (46.744,160.639,46.619)
N7: (49.158,162.138,47.865)
N9: (50.233,161.203,49.599)
O5': (52.999,163.462,48.637)
O3': (54.384,159.705,49.352)
OP1: (38.926,153.250,44.917)
OP2: (36.793,152.723,43.595)
C3': (38.305,157.616,42.260)
C1': (39.915,157.819,43.948)
C5': (37.149,155.763,43.655)
O4': (38.731,157.362,44.584)
C8: (41.328,156.010,45.088)
O2': (40.610,158.193,41.666)
C6: (44.161,157.718,46.317)
C5: (42.982,157.170,45.762)
C4: (42.152,158.043,45.079)
P: (38.162,153.300,43.644)
C4': (37.689,157.179,43.586)
C2': (39.794,157.383,42.492)
C2: (43.488,159.754,45.441)
N1: (44.388,159.039,46.131)
N3: (42.349,159.358,44.879)
N6: (45.056,157.014,47.012)
N7: (42.449,155.886,45.760)
N9: (41.077,157.293,44.665)
O5': (38.120,154.818,43.136)
O3': (38.081,159.012,42.100)
OP2: (36.793,152.723,43.595)
C3': (38.305,157.616,42.260)
C1': (39.915,157.819,43.948)
C5': (37.149,155.763,43.655)
O4': (38.731,157.362,44.584)
C8: (41.328,156.010,45.088)
O2': (40.610,158.193,41.666)
C6: (44.161,157.718,46.317)
C5: (42.982,157.170,45.762)
C4: (42.152,158.043,45.079)
P: (38.162,153.300,43.644)
C4': (37.689,157.179,43.586)
C2': (39.794,157.383,42.492)
C2: (43.488,159.754,45.441)
N1: (44.388,159.039,46.131)
N3: (42.349,159.358,44.879)
N6: (45.056,157.014,47.012)
N7: (42.449,155.886,45.760)
N9: (41.077,157.293,44.665)
O5': (38.120,154.818,43.136)
O3': (38.081,159.012,42.100)
Image (generated by PyMOL):