Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A501:A476
Extra
PDB:
ATOM 1 O3' G A 500 27.772 157.007 62.794 1.00 59.90 O
ATOM 2 P A A 501 28.948 156.758 63.846 1.00 61.89 P
ATOM 3 OP1 A A 501 28.488 155.716 64.805 1.00 58.66 O
ATOM 4 OP2 A A 501 29.383 158.080 64.344 1.00 62.17 O
ATOM 5 O5' A A 501 30.122 156.154 62.965 1.00 61.01 O
ATOM 6 C5' A A 501 30.023 154.844 62.419 1.00 64.00 C
ATOM 7 C4' A A 501 30.729 154.803 61.105 1.00 66.73 C
ATOM 8 O4' A A 501 29.943 155.537 60.132 1.00 68.17 O
ATOM 9 C3' A A 501 32.104 155.441 61.127 1.00 69.05 C
ATOM 10 O3' A A 501 32.990 154.684 60.353 1.00 72.98 O
ATOM 11 C2' A A 501 31.864 156.826 60.544 1.00 69.64 C
ATOM 12 O2' A A 501 32.964 157.339 59.824 1.00 70.28 O
ATOM 13 C1' A A 501 30.703 156.591 59.587 1.00 69.60 C
ATOM 14 N9 A A 501 29.855 157.785 59.530 1.00 72.06 N
ATOM 15 C8 A A 501 28.948 158.229 60.478 1.00 73.05 C
ATOM 16 N7 A A 501 28.355 159.356 60.159 1.00 73.41 N
ATOM 17 C5 A A 501 28.904 159.678 58.922 1.00 74.09 C
ATOM 18 C6 A A 501 28.699 160.760 58.058 1.00 74.90 C
ATOM 19 N6 A A 501 27.856 161.762 58.320 1.00 74.90 N
ATOM 20 N1 A A 501 29.399 160.782 56.900 1.00 74.95 N
ATOM 21 C2 A A 501 30.250 159.779 56.642 1.00 74.29 C
ATOM 22 N3 A A 501 30.537 158.709 57.379 1.00 73.31 N
ATOM 23 C4 A A 501 29.822 158.716 58.520 1.00 73.22 C
ATOM 24 P G A 502 34.319 154.096 61.037 1.00 76.65 P
ATOM 25 OP1 G A 502 34.074 153.765 62.473 1.00 74.93 O
ATOM 26 OP2 G A 502 35.407 155.048 60.689 1.00 77.14 O
ATOM 27 O5' G A 502 34.550 152.724 60.256 1.00 78.05 O
TER
ATOM 1 O3' G B 475 26.066 163.547 55.924 1.00 53.64 O
ATOM 2 P U B 476 26.679 164.948 56.412 1.00 52.79 P
ATOM 3 OP1 U B 476 26.998 165.739 55.201 1.00 52.26 O
ATOM 4 OP2 U B 476 27.735 164.755 57.444 1.00 53.93 O
ATOM 5 O5' U B 476 25.420 165.590 57.142 1.00 53.38 O
ATOM 6 C5' U B 476 24.285 166.055 56.398 1.00 55.32 C
ATOM 7 C4' U B 476 23.095 166.250 57.310 1.00 57.47 C
ATOM 8 O4' U B 476 22.695 164.982 57.857 1.00 58.57 O
ATOM 9 C3' U B 476 23.344 167.106 58.538 1.00 58.61 C
ATOM 10 O3' U B 476 23.191 168.470 58.208 1.00 59.42 O
ATOM 11 C2' U B 476 22.254 166.660 59.506 1.00 59.31 C
ATOM 12 O2' U B 476 21.051 167.378 59.368 1.00 59.24 O
ATOM 13 C1' U B 476 22.053 165.193 59.104 1.00 60.19 C
ATOM 14 N1 U B 476 22.550 164.190 60.060 1.00 61.78 N
ATOM 15 C2 U B 476 21.808 163.952 61.207 1.00 61.92 C
ATOM 16 O2 U B 476 20.795 164.572 61.488 1.00 62.99 O
ATOM 17 N3 U B 476 22.303 162.970 62.019 1.00 61.85 N
ATOM 18 C4 U B 476 23.448 162.229 61.821 1.00 62.22 C
ATOM 19 O4 U B 476 23.782 161.396 62.666 1.00 63.10 O
ATOM 20 C5 U B 476 24.168 162.548 60.631 1.00 61.76 C
ATOM 21 C6 U B 476 23.708 163.495 59.814 1.00 61.78 C
ATOM 22 P A B 477 24.329 169.513 58.603 1.00 60.45 P
ATOM 23 OP1 A B 477 25.511 169.133 57.790 1.00 59.51 O
ATOM 24 OP2 A B 477 24.421 169.501 60.084 1.00 59.66 O
ATOM 25 O5' A B 477 23.727 170.921 58.129 1.00 61.20 O
TER
ATOM 2 P A A 501 28.948 156.758 63.846 1.00 61.89 P
ATOM 3 OP1 A A 501 28.488 155.716 64.805 1.00 58.66 O
ATOM 4 OP2 A A 501 29.383 158.080 64.344 1.00 62.17 O
ATOM 5 O5' A A 501 30.122 156.154 62.965 1.00 61.01 O
ATOM 6 C5' A A 501 30.023 154.844 62.419 1.00 64.00 C
ATOM 7 C4' A A 501 30.729 154.803 61.105 1.00 66.73 C
ATOM 8 O4' A A 501 29.943 155.537 60.132 1.00 68.17 O
ATOM 9 C3' A A 501 32.104 155.441 61.127 1.00 69.05 C
ATOM 10 O3' A A 501 32.990 154.684 60.353 1.00 72.98 O
ATOM 11 C2' A A 501 31.864 156.826 60.544 1.00 69.64 C
ATOM 12 O2' A A 501 32.964 157.339 59.824 1.00 70.28 O
ATOM 13 C1' A A 501 30.703 156.591 59.587 1.00 69.60 C
ATOM 14 N9 A A 501 29.855 157.785 59.530 1.00 72.06 N
ATOM 15 C8 A A 501 28.948 158.229 60.478 1.00 73.05 C
ATOM 16 N7 A A 501 28.355 159.356 60.159 1.00 73.41 N
ATOM 17 C5 A A 501 28.904 159.678 58.922 1.00 74.09 C
ATOM 18 C6 A A 501 28.699 160.760 58.058 1.00 74.90 C
ATOM 19 N6 A A 501 27.856 161.762 58.320 1.00 74.90 N
ATOM 20 N1 A A 501 29.399 160.782 56.900 1.00 74.95 N
ATOM 21 C2 A A 501 30.250 159.779 56.642 1.00 74.29 C
ATOM 22 N3 A A 501 30.537 158.709 57.379 1.00 73.31 N
ATOM 23 C4 A A 501 29.822 158.716 58.520 1.00 73.22 C
ATOM 24 P G A 502 34.319 154.096 61.037 1.00 76.65 P
ATOM 25 OP1 G A 502 34.074 153.765 62.473 1.00 74.93 O
ATOM 26 OP2 G A 502 35.407 155.048 60.689 1.00 77.14 O
ATOM 27 O5' G A 502 34.550 152.724 60.256 1.00 78.05 O
TER
ATOM 1 O3' G B 475 26.066 163.547 55.924 1.00 53.64 O
ATOM 2 P U B 476 26.679 164.948 56.412 1.00 52.79 P
ATOM 3 OP1 U B 476 26.998 165.739 55.201 1.00 52.26 O
ATOM 4 OP2 U B 476 27.735 164.755 57.444 1.00 53.93 O
ATOM 5 O5' U B 476 25.420 165.590 57.142 1.00 53.38 O
ATOM 6 C5' U B 476 24.285 166.055 56.398 1.00 55.32 C
ATOM 7 C4' U B 476 23.095 166.250 57.310 1.00 57.47 C
ATOM 8 O4' U B 476 22.695 164.982 57.857 1.00 58.57 O
ATOM 9 C3' U B 476 23.344 167.106 58.538 1.00 58.61 C
ATOM 10 O3' U B 476 23.191 168.470 58.208 1.00 59.42 O
ATOM 11 C2' U B 476 22.254 166.660 59.506 1.00 59.31 C
ATOM 12 O2' U B 476 21.051 167.378 59.368 1.00 59.24 O
ATOM 13 C1' U B 476 22.053 165.193 59.104 1.00 60.19 C
ATOM 14 N1 U B 476 22.550 164.190 60.060 1.00 61.78 N
ATOM 15 C2 U B 476 21.808 163.952 61.207 1.00 61.92 C
ATOM 16 O2 U B 476 20.795 164.572 61.488 1.00 62.99 O
ATOM 17 N3 U B 476 22.303 162.970 62.019 1.00 61.85 N
ATOM 18 C4 U B 476 23.448 162.229 61.821 1.00 62.22 C
ATOM 19 O4 U B 476 23.782 161.396 62.666 1.00 63.10 O
ATOM 20 C5 U B 476 24.168 162.548 60.631 1.00 61.76 C
ATOM 21 C6 U B 476 23.708 163.495 59.814 1.00 61.78 C
ATOM 22 P A B 477 24.329 169.513 58.603 1.00 60.45 P
ATOM 23 OP1 A B 477 25.511 169.133 57.790 1.00 59.51 O
ATOM 24 OP2 A B 477 24.421 169.501 60.084 1.00 59.66 O
ATOM 25 O5' A B 477 23.727 170.921 58.129 1.00 61.20 O
TER
Atoms:
OP1: (28.488,155.716,64.805)
OP2: (29.383,158.080,64.344)
C3': (32.104,155.441,61.127)
C1': (30.703,156.591,59.587)
C5': (30.023,154.844,62.419)
O4': (29.943,155.537,60.132)
C8: (28.948,158.229,60.478)
O2': (32.964,157.339,59.824)
C6: (28.699,160.760,58.058)
C5: (28.904,159.678,58.922)
C4: (29.822,158.716,58.520)
P: (28.948,156.758,63.846)
C4': (30.729,154.803,61.105)
C2': (31.864,156.826,60.544)
C2: (30.250,159.779,56.642)
N1: (29.399,160.782,56.900)
N3: (30.537,158.709,57.379)
N6: (27.856,161.762,58.320)
N7: (28.355,159.356,60.159)
N9: (29.855,157.785,59.530)
O5': (30.122,156.154,62.965)
O3': (32.990,154.684,60.353)
OP2: (29.383,158.080,64.344)
C3': (32.104,155.441,61.127)
C1': (30.703,156.591,59.587)
C5': (30.023,154.844,62.419)
O4': (29.943,155.537,60.132)
C8: (28.948,158.229,60.478)
O2': (32.964,157.339,59.824)
C6: (28.699,160.760,58.058)
C5: (28.904,159.678,58.922)
C4: (29.822,158.716,58.520)
P: (28.948,156.758,63.846)
C4': (30.729,154.803,61.105)
C2': (31.864,156.826,60.544)
C2: (30.250,159.779,56.642)
N1: (29.399,160.782,56.900)
N3: (30.537,158.709,57.379)
N6: (27.856,161.762,58.320)
N7: (28.355,159.356,60.159)
N9: (29.855,157.785,59.530)
O5': (30.122,156.154,62.965)
O3': (32.990,154.684,60.353)
C4: (23.448,162.229,61.821)
N3: (22.303,162.970,62.019)
OP1: (26.998,165.739,55.201)
OP2: (27.735,164.755,57.444)
C2: (21.808,163.952,61.207)
C1': (22.053,165.193,59.104)
C3': (23.344,167.106,58.538)
O5': (25.420,165.590,57.142)
O4': (22.695,164.982,57.857)
C5': (24.285,166.055,56.398)
P: (26.679,164.948,56.412)
C4': (23.095,166.250,57.310)
C2': (22.254,166.660,59.506)
O2': (21.051,167.378,59.368)
N1: (22.550,164.190,60.060)
O4: (23.782,161.396,62.666)
O2: (20.795,164.572,61.488)
C6: (23.708,163.495,59.814)
C5: (24.168,162.548,60.631)
O3': (23.191,168.470,58.208)
N3: (22.303,162.970,62.019)
OP1: (26.998,165.739,55.201)
OP2: (27.735,164.755,57.444)
C2: (21.808,163.952,61.207)
C1': (22.053,165.193,59.104)
C3': (23.344,167.106,58.538)
O5': (25.420,165.590,57.142)
O4': (22.695,164.982,57.857)
C5': (24.285,166.055,56.398)
P: (26.679,164.948,56.412)
C4': (23.095,166.250,57.310)
C2': (22.254,166.660,59.506)
O2': (21.051,167.378,59.368)
N1: (22.550,164.190,60.060)
O4: (23.782,161.396,62.666)
O2: (20.795,164.572,61.488)
C6: (23.708,163.495,59.814)
C5: (24.168,162.548,60.631)
O3': (23.191,168.470,58.208)
Image (generated by PyMOL):