Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A616:A2376
Extra
PDB:
ATOM 1 O3' G A 615 43.187 106.742 96.370 1.00 29.22 O
ATOM 2 P A A 616 42.583 107.591 95.161 1.00 27.83 P
ATOM 3 OP1 A A 616 41.126 107.547 95.327 1.00 26.59 O
ATOM 4 OP2 A A 616 43.191 107.147 93.896 1.00 27.82 O
ATOM 5 O5' A A 616 43.065 109.061 95.499 1.00 28.99 O
ATOM 6 C5' A A 616 42.520 109.735 96.623 1.00 31.46 C
ATOM 7 C4' A A 616 42.549 111.220 96.424 1.00 32.11 C
ATOM 8 O4' A A 616 43.931 111.657 96.407 1.00 34.12 O
ATOM 9 C3' A A 616 41.884 111.799 95.187 1.00 31.78 C
ATOM 10 O3' A A 616 41.175 112.966 95.587 1.00 30.19 O
ATOM 11 C2' A A 616 43.088 112.144 94.304 1.00 33.68 C
ATOM 12 O2' A A 616 42.871 113.212 93.410 1.00 35.87 O
ATOM 13 C1' A A 616 44.142 112.537 95.336 1.00 34.36 C
ATOM 14 N9 A A 616 45.534 112.382 94.912 1.00 36.10 N
ATOM 15 C8 A A 616 46.005 111.901 93.717 1.00 36.04 C
ATOM 16 N7 A A 616 47.314 111.835 93.653 1.00 35.94 N
ATOM 17 C5 A A 616 47.737 112.314 94.886 1.00 35.30 C
ATOM 18 C6 A A 616 49.011 112.472 95.449 1.00 34.80 C
ATOM 19 N6 A A 616 50.133 112.182 94.801 1.00 33.99 N
ATOM 20 N1 A A 616 49.094 112.950 96.711 1.00 33.85 N
ATOM 21 C2 A A 616 47.962 113.260 97.350 1.00 36.07 C
ATOM 22 N3 A A 616 46.699 113.163 96.928 1.00 36.89 N
ATOM 23 C4 A A 616 46.654 112.671 95.670 1.00 36.67 C
ATOM 24 P A A 617 39.599 112.882 95.901 1.00 28.17 P
ATOM 25 OP1 A A 617 39.330 111.755 96.809 1.00 27.86 O
ATOM 26 OP2 A A 617 38.863 112.989 94.636 1.00 26.52 O
ATOM 27 O5' A A 617 39.286 114.225 96.689 1.00 27.94 O
TER
ATOM 1 O3' C B2375 53.292 112.410 98.158 1.00 41.25 O
ATOM 2 P U B2376 53.925 112.422 96.696 1.00 40.22 P
ATOM 3 OP1 U B2376 52.771 112.545 95.786 1.00 42.43 O
ATOM 4 OP2 U B2376 54.797 111.234 96.616 1.00 42.26 O
ATOM 5 O5' U B2376 54.829 113.739 96.660 1.00 41.40 O
ATOM 6 C5' U B2376 54.244 115.036 96.432 1.00 41.55 C
ATOM 7 C4' U B2376 55.241 116.121 96.737 1.00 41.95 C
ATOM 8 O4' U B2376 55.866 115.806 98.010 1.00 42.24 O
ATOM 9 C3' U B2376 56.433 116.251 95.796 1.00 41.79 C
ATOM 10 O3' U B2376 56.093 117.011 94.622 1.00 40.76 O
ATOM 11 C2' U B2376 57.434 117.007 96.677 1.00 42.00 C
ATOM 12 O2' U B2376 57.125 118.385 96.740 1.00 42.60 O
ATOM 13 C1' U B2376 57.152 116.407 98.064 1.00 42.13 C
ATOM 14 N1 U B2376 58.117 115.415 98.575 1.00 42.50 N
ATOM 15 C2 U B2376 59.268 115.867 99.223 1.00 42.58 C
ATOM 16 O2 U B2376 59.505 117.050 99.443 1.00 42.28 O
ATOM 17 N3 U B2376 60.130 114.870 99.622 1.00 41.85 N
ATOM 18 C4 U B2376 59.961 113.514 99.476 1.00 41.80 C
ATOM 19 O4 U B2376 60.825 112.751 99.891 1.00 42.84 O
ATOM 20 C5 U B2376 58.754 113.130 98.833 1.00 42.75 C
ATOM 21 C6 U B2376 57.896 114.064 98.411 1.00 42.72 C
ATOM 22 P C B2377 56.322 116.393 93.140 1.00 40.65 P
ATOM 23 OP1 C B2377 55.607 117.271 92.154 1.00 41.28 O
ATOM 24 OP2 C B2377 55.927 114.991 93.246 1.00 39.74 O
ATOM 25 O5' C B2377 57.904 116.472 92.868 1.00 39.72 O
TER
ATOM 2 P A A 616 42.583 107.591 95.161 1.00 27.83 P
ATOM 3 OP1 A A 616 41.126 107.547 95.327 1.00 26.59 O
ATOM 4 OP2 A A 616 43.191 107.147 93.896 1.00 27.82 O
ATOM 5 O5' A A 616 43.065 109.061 95.499 1.00 28.99 O
ATOM 6 C5' A A 616 42.520 109.735 96.623 1.00 31.46 C
ATOM 7 C4' A A 616 42.549 111.220 96.424 1.00 32.11 C
ATOM 8 O4' A A 616 43.931 111.657 96.407 1.00 34.12 O
ATOM 9 C3' A A 616 41.884 111.799 95.187 1.00 31.78 C
ATOM 10 O3' A A 616 41.175 112.966 95.587 1.00 30.19 O
ATOM 11 C2' A A 616 43.088 112.144 94.304 1.00 33.68 C
ATOM 12 O2' A A 616 42.871 113.212 93.410 1.00 35.87 O
ATOM 13 C1' A A 616 44.142 112.537 95.336 1.00 34.36 C
ATOM 14 N9 A A 616 45.534 112.382 94.912 1.00 36.10 N
ATOM 15 C8 A A 616 46.005 111.901 93.717 1.00 36.04 C
ATOM 16 N7 A A 616 47.314 111.835 93.653 1.00 35.94 N
ATOM 17 C5 A A 616 47.737 112.314 94.886 1.00 35.30 C
ATOM 18 C6 A A 616 49.011 112.472 95.449 1.00 34.80 C
ATOM 19 N6 A A 616 50.133 112.182 94.801 1.00 33.99 N
ATOM 20 N1 A A 616 49.094 112.950 96.711 1.00 33.85 N
ATOM 21 C2 A A 616 47.962 113.260 97.350 1.00 36.07 C
ATOM 22 N3 A A 616 46.699 113.163 96.928 1.00 36.89 N
ATOM 23 C4 A A 616 46.654 112.671 95.670 1.00 36.67 C
ATOM 24 P A A 617 39.599 112.882 95.901 1.00 28.17 P
ATOM 25 OP1 A A 617 39.330 111.755 96.809 1.00 27.86 O
ATOM 26 OP2 A A 617 38.863 112.989 94.636 1.00 26.52 O
ATOM 27 O5' A A 617 39.286 114.225 96.689 1.00 27.94 O
TER
ATOM 1 O3' C B2375 53.292 112.410 98.158 1.00 41.25 O
ATOM 2 P U B2376 53.925 112.422 96.696 1.00 40.22 P
ATOM 3 OP1 U B2376 52.771 112.545 95.786 1.00 42.43 O
ATOM 4 OP2 U B2376 54.797 111.234 96.616 1.00 42.26 O
ATOM 5 O5' U B2376 54.829 113.739 96.660 1.00 41.40 O
ATOM 6 C5' U B2376 54.244 115.036 96.432 1.00 41.55 C
ATOM 7 C4' U B2376 55.241 116.121 96.737 1.00 41.95 C
ATOM 8 O4' U B2376 55.866 115.806 98.010 1.00 42.24 O
ATOM 9 C3' U B2376 56.433 116.251 95.796 1.00 41.79 C
ATOM 10 O3' U B2376 56.093 117.011 94.622 1.00 40.76 O
ATOM 11 C2' U B2376 57.434 117.007 96.677 1.00 42.00 C
ATOM 12 O2' U B2376 57.125 118.385 96.740 1.00 42.60 O
ATOM 13 C1' U B2376 57.152 116.407 98.064 1.00 42.13 C
ATOM 14 N1 U B2376 58.117 115.415 98.575 1.00 42.50 N
ATOM 15 C2 U B2376 59.268 115.867 99.223 1.00 42.58 C
ATOM 16 O2 U B2376 59.505 117.050 99.443 1.00 42.28 O
ATOM 17 N3 U B2376 60.130 114.870 99.622 1.00 41.85 N
ATOM 18 C4 U B2376 59.961 113.514 99.476 1.00 41.80 C
ATOM 19 O4 U B2376 60.825 112.751 99.891 1.00 42.84 O
ATOM 20 C5 U B2376 58.754 113.130 98.833 1.00 42.75 C
ATOM 21 C6 U B2376 57.896 114.064 98.411 1.00 42.72 C
ATOM 22 P C B2377 56.322 116.393 93.140 1.00 40.65 P
ATOM 23 OP1 C B2377 55.607 117.271 92.154 1.00 41.28 O
ATOM 24 OP2 C B2377 55.927 114.991 93.246 1.00 39.74 O
ATOM 25 O5' C B2377 57.904 116.472 92.868 1.00 39.72 O
TER
Atoms:
OP1: (41.126,107.547,95.327)
OP2: (43.191,107.147,93.896)
C3': (41.884,111.799,95.187)
C1': (44.142,112.537,95.336)
C5': (42.520,109.735,96.623)
O4': (43.931,111.657,96.407)
C8: (46.005,111.901,93.717)
O2': (42.871,113.212,93.410)
C6: (49.011,112.472,95.449)
C5: (47.737,112.314,94.886)
C4: (46.654,112.671,95.670)
P: (42.583,107.591,95.161)
C4': (42.549,111.220,96.424)
C2': (43.088,112.144,94.304)
C2: (47.962,113.260,97.350)
N1: (49.094,112.950,96.711)
N3: (46.699,113.163,96.928)
N6: (50.133,112.182,94.801)
N7: (47.314,111.835,93.653)
N9: (45.534,112.382,94.912)
O5': (43.065,109.061,95.499)
O3': (41.175,112.966,95.587)
OP2: (43.191,107.147,93.896)
C3': (41.884,111.799,95.187)
C1': (44.142,112.537,95.336)
C5': (42.520,109.735,96.623)
O4': (43.931,111.657,96.407)
C8: (46.005,111.901,93.717)
O2': (42.871,113.212,93.410)
C6: (49.011,112.472,95.449)
C5: (47.737,112.314,94.886)
C4: (46.654,112.671,95.670)
P: (42.583,107.591,95.161)
C4': (42.549,111.220,96.424)
C2': (43.088,112.144,94.304)
C2: (47.962,113.260,97.350)
N1: (49.094,112.950,96.711)
N3: (46.699,113.163,96.928)
N6: (50.133,112.182,94.801)
N7: (47.314,111.835,93.653)
N9: (45.534,112.382,94.912)
O5': (43.065,109.061,95.499)
O3': (41.175,112.966,95.587)
C4: (59.961,113.514,99.476)
N3: (60.130,114.870,99.622)
OP1: (52.771,112.545,95.786)
OP2: (54.797,111.234,96.616)
C2: (59.268,115.867,99.223)
C1': (57.152,116.407,98.064)
C3': (56.433,116.251,95.796)
O5': (54.829,113.739,96.660)
O4': (55.866,115.806,98.010)
C5': (54.244,115.036,96.432)
P: (53.925,112.422,96.696)
C4': (55.241,116.121,96.737)
C2': (57.434,117.007,96.677)
O2': (57.125,118.385,96.740)
N1: (58.117,115.415,98.575)
O4: (60.825,112.751,99.891)
O2: (59.505,117.050,99.443)
C6: (57.896,114.064,98.411)
C5: (58.754,113.130,98.833)
O3': (56.093,117.011,94.622)
N3: (60.130,114.870,99.622)
OP1: (52.771,112.545,95.786)
OP2: (54.797,111.234,96.616)
C2: (59.268,115.867,99.223)
C1': (57.152,116.407,98.064)
C3': (56.433,116.251,95.796)
O5': (54.829,113.739,96.660)
O4': (55.866,115.806,98.010)
C5': (54.244,115.036,96.432)
P: (53.925,112.422,96.696)
C4': (55.241,116.121,96.737)
C2': (57.434,117.007,96.677)
O2': (57.125,118.385,96.740)
N1: (58.117,115.415,98.575)
O4: (60.825,112.751,99.891)
O2: (59.505,117.050,99.443)
C6: (57.896,114.064,98.411)
C5: (58.754,113.130,98.833)
O3': (56.093,117.011,94.622)
Image (generated by PyMOL):