Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A681:A720
Extra
PDB:
ATOM 1 O3' A A 680 65.420 74.525 46.076 1.00 55.35 O
ATOM 2 P A A 681 64.414 74.095 44.915 1.00 55.30 P
ATOM 3 OP1 A A 681 63.846 75.321 44.272 1.00 54.10 O
ATOM 4 OP2 A A 681 63.505 73.137 45.590 1.00 54.46 O
ATOM 5 O5' A A 681 65.369 73.335 43.875 1.00 56.94 O
ATOM 6 C5' A A 681 66.416 74.064 43.162 1.00 59.14 C
ATOM 7 C4' A A 681 67.390 73.125 42.467 1.00 59.58 C
ATOM 8 O4' A A 681 68.031 72.286 43.454 1.00 60.04 O
ATOM 9 C3' A A 681 66.834 72.162 41.427 1.00 60.17 C
ATOM 10 O3' A A 681 66.695 72.803 40.150 1.00 61.41 O
ATOM 11 C2' A A 681 67.880 71.047 41.427 1.00 60.22 C
ATOM 12 O2' A A 681 69.049 71.298 40.669 1.00 61.03 O
ATOM 13 C1' A A 681 68.286 71.008 42.901 1.00 60.45 C
ATOM 14 N9 A A 681 67.541 70.017 43.674 1.00 61.57 N
ATOM 15 C8 A A 681 66.359 70.194 44.360 1.00 61.66 C
ATOM 16 N7 A A 681 65.916 69.106 44.945 1.00 62.06 N
ATOM 17 C5 A A 681 66.874 68.148 44.635 1.00 62.46 C
ATOM 18 C6 A A 681 66.989 66.786 44.966 1.00 62.46 C
ATOM 19 N6 A A 681 66.108 66.132 45.722 1.00 61.42 N
ATOM 20 N1 A A 681 68.057 66.112 44.493 1.00 63.41 N
ATOM 21 C2 A A 681 68.951 66.772 43.746 1.00 64.09 C
ATOM 22 N3 A A 681 68.965 68.052 43.374 1.00 63.38 N
ATOM 23 C4 A A 681 67.883 68.695 43.854 1.00 62.32 C
ATOM 24 P A A 682 65.634 72.247 39.062 1.00 62.73 P
ATOM 25 OP1 A A 682 65.728 73.196 37.902 1.00 62.64 O
ATOM 26 OP2 A A 682 64.310 72.015 39.688 1.00 62.47 O
ATOM 27 O5' A A 682 66.234 70.820 38.646 1.00 62.21 O
TER
ATOM 1 O3' C B 719 64.280 64.404 47.911 1.00 57.05 O
ATOM 2 P U B 720 65.303 63.175 47.902 1.00 59.57 P
ATOM 3 OP1 U B 720 66.626 63.671 47.447 1.00 60.16 O
ATOM 4 OP2 U B 720 64.655 62.044 47.187 1.00 59.45 O
ATOM 5 O5' U B 720 65.455 62.817 49.441 1.00 61.89 O
ATOM 6 C5' U B 720 66.135 63.707 50.338 1.00 66.79 C
ATOM 7 C4' U B 720 65.999 63.197 51.741 1.00 69.70 C
ATOM 8 O4' U B 720 64.582 63.056 52.045 1.00 70.64 O
ATOM 9 C3' U B 720 66.509 61.784 51.922 1.00 72.52 C
ATOM 10 O3' U B 720 67.925 61.717 52.037 1.00 78.10 O
ATOM 11 C2' U B 720 65.772 61.335 53.174 1.00 70.94 C
ATOM 12 O2' U B 720 66.374 61.839 54.347 1.00 70.76 O
ATOM 13 C1' U B 720 64.393 61.973 52.954 1.00 70.50 C
ATOM 14 N1 U B 720 63.373 61.045 52.418 1.00 69.87 N
ATOM 15 C2 U B 720 62.589 60.333 53.327 1.00 69.03 C
ATOM 16 O2 U B 720 62.678 60.479 54.531 1.00 68.41 O
ATOM 17 N3 U B 720 61.696 59.447 52.770 1.00 68.43 N
ATOM 18 C4 U B 720 61.495 59.204 51.430 1.00 69.19 C
ATOM 19 O4 U B 720 60.676 58.349 51.079 1.00 69.03 O
ATOM 20 C5 U B 720 62.316 59.992 50.556 1.00 70.24 C
ATOM 21 C6 U B 720 63.202 60.865 51.067 1.00 70.15 C
ATOM 22 P U B 721 68.673 60.312 51.790 1.00 82.25 P
ATOM 23 OP1 U B 721 70.127 60.536 52.044 1.00 81.97 O
ATOM 24 OP2 U B 721 68.236 59.801 50.467 1.00 81.32 O
ATOM 25 O5' U B 721 68.069 59.358 52.923 1.00 87.10 O
TER
ATOM 2 P A A 681 64.414 74.095 44.915 1.00 55.30 P
ATOM 3 OP1 A A 681 63.846 75.321 44.272 1.00 54.10 O
ATOM 4 OP2 A A 681 63.505 73.137 45.590 1.00 54.46 O
ATOM 5 O5' A A 681 65.369 73.335 43.875 1.00 56.94 O
ATOM 6 C5' A A 681 66.416 74.064 43.162 1.00 59.14 C
ATOM 7 C4' A A 681 67.390 73.125 42.467 1.00 59.58 C
ATOM 8 O4' A A 681 68.031 72.286 43.454 1.00 60.04 O
ATOM 9 C3' A A 681 66.834 72.162 41.427 1.00 60.17 C
ATOM 10 O3' A A 681 66.695 72.803 40.150 1.00 61.41 O
ATOM 11 C2' A A 681 67.880 71.047 41.427 1.00 60.22 C
ATOM 12 O2' A A 681 69.049 71.298 40.669 1.00 61.03 O
ATOM 13 C1' A A 681 68.286 71.008 42.901 1.00 60.45 C
ATOM 14 N9 A A 681 67.541 70.017 43.674 1.00 61.57 N
ATOM 15 C8 A A 681 66.359 70.194 44.360 1.00 61.66 C
ATOM 16 N7 A A 681 65.916 69.106 44.945 1.00 62.06 N
ATOM 17 C5 A A 681 66.874 68.148 44.635 1.00 62.46 C
ATOM 18 C6 A A 681 66.989 66.786 44.966 1.00 62.46 C
ATOM 19 N6 A A 681 66.108 66.132 45.722 1.00 61.42 N
ATOM 20 N1 A A 681 68.057 66.112 44.493 1.00 63.41 N
ATOM 21 C2 A A 681 68.951 66.772 43.746 1.00 64.09 C
ATOM 22 N3 A A 681 68.965 68.052 43.374 1.00 63.38 N
ATOM 23 C4 A A 681 67.883 68.695 43.854 1.00 62.32 C
ATOM 24 P A A 682 65.634 72.247 39.062 1.00 62.73 P
ATOM 25 OP1 A A 682 65.728 73.196 37.902 1.00 62.64 O
ATOM 26 OP2 A A 682 64.310 72.015 39.688 1.00 62.47 O
ATOM 27 O5' A A 682 66.234 70.820 38.646 1.00 62.21 O
TER
ATOM 1 O3' C B 719 64.280 64.404 47.911 1.00 57.05 O
ATOM 2 P U B 720 65.303 63.175 47.902 1.00 59.57 P
ATOM 3 OP1 U B 720 66.626 63.671 47.447 1.00 60.16 O
ATOM 4 OP2 U B 720 64.655 62.044 47.187 1.00 59.45 O
ATOM 5 O5' U B 720 65.455 62.817 49.441 1.00 61.89 O
ATOM 6 C5' U B 720 66.135 63.707 50.338 1.00 66.79 C
ATOM 7 C4' U B 720 65.999 63.197 51.741 1.00 69.70 C
ATOM 8 O4' U B 720 64.582 63.056 52.045 1.00 70.64 O
ATOM 9 C3' U B 720 66.509 61.784 51.922 1.00 72.52 C
ATOM 10 O3' U B 720 67.925 61.717 52.037 1.00 78.10 O
ATOM 11 C2' U B 720 65.772 61.335 53.174 1.00 70.94 C
ATOM 12 O2' U B 720 66.374 61.839 54.347 1.00 70.76 O
ATOM 13 C1' U B 720 64.393 61.973 52.954 1.00 70.50 C
ATOM 14 N1 U B 720 63.373 61.045 52.418 1.00 69.87 N
ATOM 15 C2 U B 720 62.589 60.333 53.327 1.00 69.03 C
ATOM 16 O2 U B 720 62.678 60.479 54.531 1.00 68.41 O
ATOM 17 N3 U B 720 61.696 59.447 52.770 1.00 68.43 N
ATOM 18 C4 U B 720 61.495 59.204 51.430 1.00 69.19 C
ATOM 19 O4 U B 720 60.676 58.349 51.079 1.00 69.03 O
ATOM 20 C5 U B 720 62.316 59.992 50.556 1.00 70.24 C
ATOM 21 C6 U B 720 63.202 60.865 51.067 1.00 70.15 C
ATOM 22 P U B 721 68.673 60.312 51.790 1.00 82.25 P
ATOM 23 OP1 U B 721 70.127 60.536 52.044 1.00 81.97 O
ATOM 24 OP2 U B 721 68.236 59.801 50.467 1.00 81.32 O
ATOM 25 O5' U B 721 68.069 59.358 52.923 1.00 87.10 O
TER
Atoms:
OP1: (63.846,75.321,44.272)
OP2: (63.505,73.137,45.590)
C3': (66.834,72.162,41.427)
C1': (68.286,71.008,42.901)
C5': (66.416,74.064,43.162)
O4': (68.031,72.286,43.454)
C8: (66.359,70.194,44.360)
O2': (69.049,71.298,40.669)
C6: (66.989,66.786,44.966)
C5: (66.874,68.148,44.635)
C4: (67.883,68.695,43.854)
P: (64.414,74.095,44.915)
C4': (67.390,73.125,42.467)
C2': (67.880,71.047,41.427)
C2: (68.951,66.772,43.746)
N1: (68.057,66.112,44.493)
N3: (68.965,68.052,43.374)
N6: (66.108,66.132,45.722)
N7: (65.916,69.106,44.945)
N9: (67.541,70.017,43.674)
O5': (65.369,73.335,43.875)
O3': (66.695,72.803,40.150)
OP2: (63.505,73.137,45.590)
C3': (66.834,72.162,41.427)
C1': (68.286,71.008,42.901)
C5': (66.416,74.064,43.162)
O4': (68.031,72.286,43.454)
C8: (66.359,70.194,44.360)
O2': (69.049,71.298,40.669)
C6: (66.989,66.786,44.966)
C5: (66.874,68.148,44.635)
C4: (67.883,68.695,43.854)
P: (64.414,74.095,44.915)
C4': (67.390,73.125,42.467)
C2': (67.880,71.047,41.427)
C2: (68.951,66.772,43.746)
N1: (68.057,66.112,44.493)
N3: (68.965,68.052,43.374)
N6: (66.108,66.132,45.722)
N7: (65.916,69.106,44.945)
N9: (67.541,70.017,43.674)
O5': (65.369,73.335,43.875)
O3': (66.695,72.803,40.150)
C4: (61.495,59.204,51.430)
N3: (61.696,59.447,52.770)
OP1: (66.626,63.671,47.447)
OP2: (64.655,62.044,47.187)
C2: (62.589,60.333,53.327)
C1': (64.393,61.973,52.954)
C3': (66.509,61.784,51.922)
O5': (65.455,62.817,49.441)
O4': (64.582,63.056,52.045)
C5': (66.135,63.707,50.338)
P: (65.303,63.175,47.902)
C4': (65.999,63.197,51.741)
C2': (65.772,61.335,53.174)
O2': (66.374,61.839,54.347)
N1: (63.373,61.045,52.418)
O4: (60.676,58.349,51.079)
O2: (62.678,60.479,54.531)
C6: (63.202,60.865,51.067)
C5: (62.316,59.992,50.556)
O3': (67.925,61.717,52.037)
N3: (61.696,59.447,52.770)
OP1: (66.626,63.671,47.447)
OP2: (64.655,62.044,47.187)
C2: (62.589,60.333,53.327)
C1': (64.393,61.973,52.954)
C3': (66.509,61.784,51.922)
O5': (65.455,62.817,49.441)
O4': (64.582,63.056,52.045)
C5': (66.135,63.707,50.338)
P: (65.303,63.175,47.902)
C4': (65.999,63.197,51.741)
C2': (65.772,61.335,53.174)
O2': (66.374,61.839,54.347)
N1: (63.373,61.045,52.418)
O4: (60.676,58.349,51.079)
O2: (62.678,60.479,54.531)
C6: (63.202,60.865,51.067)
C5: (62.316,59.992,50.556)
O3': (67.925,61.717,52.037)
Image (generated by PyMOL):