ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:02653:0521

Extra

PDB:
ATOM 1 O3' A A2652 25.756 136.796 125.800 1.00 44.15 O
ATOM 2 P A A2653 25.235 135.909 124.564 1.00 46.13 P
ATOM 3 OP1 A A2653 24.644 134.660 125.119 1.00 42.84 O
ATOM 4 OP2 A A2653 26.329 135.822 123.562 1.00 46.58 O
ATOM 5 O5' A A2653 24.058 136.775 123.928 1.00 45.95 O
ATOM 6 C5' A A2653 22.881 137.099 124.692 1.00 45.52 C
ATOM 7 C4' A A2653 21.634 136.746 123.908 1.00 44.90 C
ATOM 8 O4' A A2653 21.555 137.584 122.716 1.00 43.58 O
ATOM 9 C3' A A2653 21.544 135.302 123.416 1.00 43.73 C
ATOM 10 O3' A A2653 20.181 134.897 123.394 1.00 44.11 O
ATOM 11 C2' A A2653 22.051 135.416 121.981 1.00 43.96 C
ATOM 12 O2' A A2653 21.584 134.391 121.130 1.00 43.65 O
ATOM 13 C1' A A2653 21.462 136.763 121.571 1.00 43.24 C
ATOM 14 N9 A A2653 22.159 137.423 120.469 1.00 43.59 N
ATOM 15 C8 A A2653 23.421 137.967 120.456 1.00 44.17 C
ATOM 16 N7 A A2653 23.753 138.504 119.305 1.00 44.30 N
ATOM 17 C5 A A2653 22.637 138.299 118.508 1.00 42.31 C
ATOM 18 C6 A A2653 22.351 138.643 117.179 1.00 42.03 C
ATOM 19 N6 A A2653 23.196 139.304 116.387 1.00 36.61 N
ATOM 20 N1 A A2653 21.143 138.286 116.684 1.00 42.04 N
ATOM 21 C2 A A2653 20.287 137.638 117.481 1.00 40.35 C
ATOM 22 N3 A A2653 20.438 137.266 118.749 1.00 43.05 N
ATOM 23 C4 A A2653 21.650 137.630 119.209 1.00 43.07 C
ATOM 24 P G A2654 19.591 133.993 124.588 1.00 45.22 P
ATOM 25 OP1 G A2654 20.585 132.953 124.987 1.00 44.18 O
ATOM 26 OP2 G A2654 18.221 133.578 124.176 1.00 46.99 O
ATOM 27 O5' G A2654 19.419 135.016 125.793 1.00 44.00 O
TER

ATOM 1 O3' A B 520 24.602 140.118 111.643 1.00 40.56 O
ATOM 2 P U B 521 23.519 139.565 112.683 1.00 38.07 P
ATOM 3 OP1 U B 521 22.274 139.222 111.968 1.00 41.93 O
ATOM 4 OP2 U B 521 23.477 140.517 113.813 1.00 40.32 O
ATOM 5 O5' U B 521 24.163 138.194 113.171 1.00 40.72 O
ATOM 6 C5' U B 521 24.451 137.153 112.223 1.00 39.81 C
ATOM 7 C4' U B 521 24.135 135.810 112.822 1.00 42.45 C
ATOM 8 O4' U B 521 25.079 135.556 113.896 1.00 42.42 O
ATOM 9 C3' U B 521 22.742 135.693 113.443 1.00 42.55 C
ATOM 10 O3' U B 521 22.284 134.346 113.342 1.00 43.22 O
ATOM 11 C2' U B 521 23.019 136.035 114.905 1.00 42.90 C
ATOM 12 O2' U B 521 22.086 135.528 115.840 1.00 45.00 O
ATOM 13 C1' U B 521 24.374 135.365 115.106 1.00 42.47 C
ATOM 14 N1 U B 521 25.152 135.942 116.209 1.00 40.40 N
ATOM 15 C2 U B 521 25.117 135.285 117.419 1.00 40.40 C
ATOM 16 O2 U B 521 24.471 134.260 117.602 1.00 40.88 O
ATOM 17 N3 U B 521 25.859 135.872 118.414 1.00 39.88 N
ATOM 18 C4 U B 521 26.614 137.027 118.317 1.00 40.63 C
ATOM 19 O4 U B 521 27.217 137.442 119.306 1.00 41.38 O
ATOM 20 C5 U B 521 26.599 137.644 117.030 1.00 39.56 C
ATOM 21 C6 U B 521 25.886 137.097 116.045 1.00 40.86 C
ATOM 22 P C B 522 21.431 133.876 112.055 1.00 43.78 P
ATOM 23 OP1 C B 522 20.758 135.040 111.438 1.00 44.21 O
ATOM 24 OP2 C B 522 20.624 132.697 112.472 1.00 45.02 O
ATOM 25 O5' C B 522 22.537 133.390 111.019 1.00 43.78 O
TER

Atoms:
OP1: (24.644,134.660,125.119)
OP2: (26.329,135.822,123.562)
C3': (21.544,135.302,123.416)
C1': (21.462,136.763,121.571)
C5': (22.881,137.099,124.692)
O4': (21.555,137.584,122.716)
C8: (23.421,137.967,120.456)
O2': (21.584,134.391,121.130)
C6: (22.351,138.643,117.179)
C5: (22.637,138.299,118.508)
C4: (21.650,137.630,119.209)
P: (25.235,135.909,124.564)
C4': (21.634,136.746,123.908)
C2': (22.051,135.416,121.981)
C2: (20.287,137.638,117.481)
N1: (21.143,138.286,116.684)
N3: (20.438,137.266,118.749)
N6: (23.196,139.304,116.387)
N7: (23.753,138.504,119.305)
N9: (22.159,137.423,120.469)
O5': (24.058,136.775,123.928)
O3': (20.181,134.897,123.394)
C4: (26.614,137.027,118.317)
N3: (25.859,135.872,118.414)
OP1: (22.274,139.222,111.968)
OP2: (23.477,140.517,113.813)
C2: (25.117,135.285,117.419)
C1': (24.374,135.365,115.106)
C3': (22.742,135.693,113.443)
O5': (24.163,138.194,113.171)
O4': (25.079,135.556,113.896)
C5': (24.451,137.153,112.223)
P: (23.519,139.565,112.683)
C4': (24.135,135.810,112.822)
C2': (23.019,136.035,114.905)
O2': (22.086,135.528,115.840)
N1: (25.152,135.942,116.209)
O4: (27.217,137.442,119.306)
O2: (24.471,134.260,117.602)
C6: (25.886,137.097,116.045)
C5: (26.599,137.644,117.030)
O3': (22.284,134.346,113.342)
Image (generated by PyMOL):
PyMOL image
show in jmol