ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:02653:0521

Extra

PDB:
ATOM 1 O3' A A2652 25.712 136.749 125.737 1.00 49.38 O
ATOM 2 P A A2653 25.128 135.883 124.518 1.00 51.29 P
ATOM 3 OP1 A A2653 24.466 134.695 125.111 1.00 50.47 O
ATOM 4 OP2 A A2653 26.203 135.693 123.516 1.00 52.65 O
ATOM 5 O5' A A2653 24.004 136.815 123.878 1.00 50.86 O
ATOM 6 C5' A A2653 22.830 137.184 124.628 1.00 50.47 C
ATOM 7 C4' A A2653 21.575 136.821 123.857 1.00 50.99 C
ATOM 8 O4' A A2653 21.494 137.633 122.651 1.00 50.38 O
ATOM 9 C3' A A2653 21.458 135.367 123.397 1.00 49.62 C
ATOM 10 O3' A A2653 20.085 134.981 123.375 1.00 48.25 O
ATOM 11 C2' A A2653 21.972 135.444 121.961 1.00 50.38 C
ATOM 12 O2' A A2653 21.495 134.402 121.135 1.00 51.05 O
ATOM 13 C1' A A2653 21.405 136.791 121.520 1.00 49.79 C
ATOM 14 N9 A A2653 22.120 137.429 120.415 1.00 49.15 N
ATOM 15 C8 A A2653 23.386 137.962 120.402 1.00 49.73 C
ATOM 16 N7 A A2653 23.729 138.483 119.248 1.00 48.93 N
ATOM 17 C5 A A2653 22.617 138.277 118.448 1.00 48.11 C
ATOM 18 C6 A A2653 22.339 138.603 117.109 1.00 47.11 C
ATOM 19 N6 A A2653 23.193 139.237 116.302 1.00 41.07 N
ATOM 20 N1 A A2653 21.130 138.251 116.619 1.00 46.06 N
ATOM 21 C2 A A2653 20.267 137.623 117.422 1.00 46.49 C
ATOM 22 N3 A A2653 20.410 137.265 118.695 1.00 48.56 N
ATOM 23 C4 A A2653 21.621 137.624 119.154 1.00 48.64 C
ATOM 24 P G A2654 19.501 134.017 124.524 1.00 49.21 P
ATOM 25 OP1 G A2654 20.517 132.995 124.910 1.00 47.17 O
ATOM 26 OP2 G A2654 18.158 133.577 124.068 1.00 48.14 O
ATOM 27 O5' G A2654 19.295 134.990 125.766 1.00 47.91 O
TER

ATOM 1 O3' A B 520 24.542 140.005 111.536 1.00 44.27 O
ATOM 2 P U B 521 23.473 139.437 112.583 1.00 41.27 P
ATOM 3 OP1 U B 521 22.263 139.003 111.868 1.00 45.21 O
ATOM 4 OP2 U B 521 23.364 140.421 113.675 1.00 43.72 O
ATOM 5 O5' U B 521 24.173 138.116 113.128 1.00 44.59 O
ATOM 6 C5' U B 521 24.503 137.046 112.229 1.00 43.17 C
ATOM 7 C4' U B 521 24.129 135.722 112.842 1.00 46.38 C
ATOM 8 O4' U B 521 25.026 135.443 113.949 1.00 47.32 O
ATOM 9 C3' U B 521 22.715 135.638 113.408 1.00 46.18 C
ATOM 10 O3' U B 521 22.236 134.306 113.277 1.00 45.60 O
ATOM 11 C2' U B 521 22.936 135.972 114.881 1.00 46.75 C
ATOM 12 O2' U B 521 21.951 135.450 115.752 1.00 47.61 O
ATOM 13 C1' U B 521 24.280 135.297 115.139 1.00 46.10 C
ATOM 14 N1 U B 521 25.042 135.897 116.242 1.00 43.71 N
ATOM 15 C2 U B 521 25.025 135.246 117.458 1.00 43.84 C
ATOM 16 O2 U B 521 24.401 134.211 117.648 1.00 43.00 O
ATOM 17 N3 U B 521 25.765 135.851 118.446 1.00 42.72 N
ATOM 18 C4 U B 521 26.495 137.025 118.340 1.00 44.48 C
ATOM 19 O4 U B 521 27.109 137.453 119.320 1.00 43.97 O
ATOM 20 C5 U B 521 26.454 137.637 117.051 1.00 43.16 C
ATOM 21 C6 U B 521 25.749 137.068 116.072 1.00 44.52 C
ATOM 22 P C B 522 21.385 133.885 111.980 1.00 47.10 P
ATOM 23 OP1 C B 522 20.762 135.100 111.401 1.00 48.70 O
ATOM 24 OP2 C B 522 20.532 132.728 112.346 1.00 48.00 O
ATOM 25 O5' C B 522 22.485 133.394 110.941 1.00 47.45 O
TER

Atoms:
OP1: (24.466,134.695,125.111)
OP2: (26.203,135.693,123.516)
C3': (21.458,135.367,123.397)
C1': (21.405,136.791,121.520)
C5': (22.830,137.184,124.628)
O4': (21.494,137.633,122.651)
C8: (23.386,137.962,120.402)
O2': (21.495,134.402,121.135)
C6: (22.339,138.603,117.109)
C5: (22.617,138.277,118.448)
C4: (21.621,137.624,119.154)
P: (25.128,135.883,124.518)
C4': (21.575,136.821,123.857)
C2': (21.972,135.444,121.961)
C2: (20.267,137.623,117.422)
N1: (21.130,138.251,116.619)
N3: (20.410,137.265,118.695)
N6: (23.193,139.237,116.302)
N7: (23.729,138.483,119.248)
N9: (22.120,137.429,120.415)
O5': (24.004,136.815,123.878)
O3': (20.085,134.981,123.375)
C4: (26.495,137.025,118.340)
N3: (25.765,135.851,118.446)
OP1: (22.263,139.003,111.868)
OP2: (23.364,140.421,113.675)
C2: (25.025,135.246,117.458)
C1': (24.280,135.297,115.139)
C3': (22.715,135.638,113.408)
O5': (24.173,138.116,113.128)
O4': (25.026,135.443,113.949)
C5': (24.503,137.046,112.229)
P: (23.473,139.437,112.583)
C4': (24.129,135.722,112.842)
C2': (22.936,135.972,114.881)
O2': (21.951,135.450,115.752)
N1: (25.042,135.897,116.242)
O4: (27.109,137.453,119.320)
O2: (24.401,134.211,117.648)
C6: (25.749,137.068,116.072)
C5: (26.454,137.637,117.051)
O3': (22.236,134.306,113.277)
Image (generated by PyMOL):
PyMOL image
show in jmol