ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:02653:0521

Extra

PDB:
ATOM 1 O3' A A2652 25.786 136.684 125.709 1.00 52.72 O
ATOM 2 P A A2653 25.173 135.829 124.495 1.00 55.06 P
ATOM 3 OP1 A A2653 24.529 134.635 125.098 1.00 54.90 O
ATOM 4 OP2 A A2653 26.212 135.648 123.456 1.00 56.09 O
ATOM 5 O5' A A2653 24.033 136.765 123.887 1.00 56.10 O
ATOM 6 C5' A A2653 22.856 137.101 124.651 1.00 55.79 C
ATOM 7 C4' A A2653 21.603 136.747 123.874 1.00 55.90 C
ATOM 8 O4' A A2653 21.517 137.577 122.681 1.00 55.68 O
ATOM 9 C3' A A2653 21.498 135.301 123.389 1.00 55.54 C
ATOM 10 O3' A A2653 20.128 134.911 123.348 1.00 54.49 O
ATOM 11 C2' A A2653 22.010 135.402 121.956 1.00 56.43 C
ATOM 12 O2' A A2653 21.539 134.364 121.118 1.00 57.26 O
ATOM 13 C1' A A2653 21.425 136.749 121.538 1.00 55.19 C
ATOM 14 N9 A A2653 22.134 137.398 120.436 1.00 53.86 N
ATOM 15 C8 A A2653 23.400 137.926 120.423 1.00 54.32 C
ATOM 16 N7 A A2653 23.743 138.444 119.268 1.00 53.31 N
ATOM 17 C5 A A2653 22.630 138.244 118.469 1.00 51.49 C
ATOM 18 C6 A A2653 22.355 138.570 117.133 1.00 51.03 C
ATOM 19 N6 A A2653 23.215 139.198 116.332 1.00 44.49 N
ATOM 20 N1 A A2653 21.142 138.227 116.639 1.00 49.94 N
ATOM 21 C2 A A2653 20.273 137.606 117.445 1.00 49.36 C
ATOM 22 N3 A A2653 20.414 137.249 118.719 1.00 52.27 N
ATOM 23 C4 A A2653 21.630 137.600 119.177 1.00 53.23 C
ATOM 24 P G A2654 19.533 133.959 124.495 1.00 53.60 P
ATOM 25 OP1 G A2654 20.548 132.932 124.862 1.00 53.06 O
ATOM 26 OP2 G A2654 18.179 133.529 124.055 1.00 53.47 O
ATOM 27 O5' G A2654 19.341 134.947 125.727 1.00 52.91 O
TER

ATOM 1 O3' A B 520 24.520 140.006 111.565 1.00 47.82 O
ATOM 2 P U B 521 23.443 139.455 112.616 1.00 44.82 P
ATOM 3 OP1 U B 521 22.233 139.026 111.894 1.00 48.35 O
ATOM 4 OP2 U B 521 23.332 140.441 113.709 1.00 46.22 O
ATOM 5 O5' U B 521 24.133 138.130 113.157 1.00 46.44 O
ATOM 6 C5' U B 521 24.499 137.088 112.239 1.00 46.40 C
ATOM 7 C4' U B 521 24.173 135.740 112.826 1.00 49.29 C
ATOM 8 O4' U B 521 25.083 135.477 113.924 1.00 50.01 O
ATOM 9 C3' U B 521 22.765 135.601 113.393 1.00 48.55 C
ATOM 10 O3' U B 521 22.336 134.254 113.247 1.00 48.82 O
ATOM 11 C2' U B 521 22.981 135.933 114.867 1.00 49.78 C
ATOM 12 O2' U B 521 22.018 135.371 115.734 1.00 52.59 O
ATOM 13 C1' U B 521 24.348 135.302 115.117 1.00 49.32 C
ATOM 14 N1 U B 521 25.096 135.928 116.214 1.00 47.27 N
ATOM 15 C2 U B 521 25.118 135.278 117.432 1.00 46.68 C
ATOM 16 O2 U B 521 24.541 134.224 117.631 1.00 45.95 O
ATOM 17 N3 U B 521 25.842 135.913 118.410 1.00 45.76 N
ATOM 18 C4 U B 521 26.525 137.112 118.294 1.00 46.38 C
ATOM 19 O4 U B 521 27.127 137.567 119.265 1.00 46.04 O
ATOM 20 C5 U B 521 26.451 137.717 117.005 1.00 45.66 C
ATOM 21 C6 U B 521 25.757 137.123 116.035 1.00 47.18 C
ATOM 22 P C B 522 21.418 133.834 111.992 1.00 50.64 P
ATOM 23 OP1 C B 522 20.776 135.053 111.445 1.00 49.43 O
ATOM 24 OP2 C B 522 20.577 132.684 112.408 1.00 50.00 O
ATOM 25 O5' C B 522 22.461 133.323 110.906 1.00 50.54 O
TER

Atoms:
OP1: (24.529,134.635,125.098)
OP2: (26.212,135.648,123.456)
C3': (21.498,135.301,123.389)
C1': (21.425,136.749,121.538)
C5': (22.856,137.101,124.651)
O4': (21.517,137.577,122.681)
C8: (23.400,137.926,120.423)
O2': (21.539,134.364,121.118)
C6: (22.355,138.570,117.133)
C5: (22.630,138.244,118.469)
C4: (21.630,137.600,119.177)
P: (25.173,135.829,124.495)
C4': (21.603,136.747,123.874)
C2': (22.010,135.402,121.956)
C2: (20.273,137.606,117.445)
N1: (21.142,138.227,116.639)
N3: (20.414,137.249,118.719)
N6: (23.215,139.198,116.332)
N7: (23.743,138.444,119.268)
N9: (22.134,137.398,120.436)
O5': (24.033,136.765,123.887)
O3': (20.128,134.911,123.348)
C4: (26.525,137.112,118.294)
N3: (25.842,135.913,118.410)
OP1: (22.233,139.026,111.894)
OP2: (23.332,140.441,113.709)
C2: (25.118,135.278,117.432)
C1': (24.348,135.302,115.117)
C3': (22.765,135.601,113.393)
O5': (24.133,138.130,113.157)
O4': (25.083,135.477,113.924)
C5': (24.499,137.088,112.239)
P: (23.443,139.455,112.616)
C4': (24.173,135.740,112.826)
C2': (22.981,135.933,114.867)
O2': (22.018,135.371,115.734)
N1: (25.096,135.928,116.214)
O4: (27.127,137.567,119.265)
O2: (24.541,134.224,117.631)
C6: (25.757,137.123,116.035)
C5: (26.451,137.717,117.005)
O3': (22.336,134.254,113.247)
Image (generated by PyMOL):
PyMOL image
show in jmol