Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0501:0476
Extra
PDB:
ATOM 1 O3' G A 500 27.771 156.950 62.495 1.00 54.86 O
ATOM 2 P A A 501 28.913 156.781 63.611 1.00 55.28 P
ATOM 3 OP1 A A 501 28.503 155.752 64.605 1.00 54.65 O
ATOM 4 OP2 A A 501 29.262 158.147 64.068 1.00 56.25 O
ATOM 5 O5' A A 501 30.141 156.204 62.784 1.00 56.20 O
ATOM 6 C5' A A 501 30.087 154.891 62.223 1.00 60.59 C
ATOM 7 C4' A A 501 30.777 154.870 60.886 1.00 65.71 C
ATOM 8 O4' A A 501 29.949 155.550 59.908 1.00 66.74 O
ATOM 9 C3' A A 501 32.139 155.542 60.848 1.00 69.51 C
ATOM 10 O3' A A 501 33.036 154.807 60.045 1.00 75.22 O
ATOM 11 C2' A A 501 31.838 156.906 60.246 1.00 70.47 C
ATOM 12 O2' A A 501 32.929 157.459 59.536 1.00 72.15 O
ATOM 13 C1' A A 501 30.671 156.604 59.309 1.00 68.46 C
ATOM 14 N9 A A 501 29.787 157.768 59.232 1.00 69.10 N
ATOM 15 C8 A A 501 28.951 158.243 60.219 1.00 68.92 C
ATOM 16 N7 A A 501 28.338 159.358 59.906 1.00 68.77 N
ATOM 17 C5 A A 501 28.782 159.630 58.621 1.00 69.20 C
ATOM 18 C6 A A 501 28.515 160.688 57.740 1.00 69.49 C
ATOM 19 N6 A A 501 27.711 161.711 58.041 1.00 69.19 N
ATOM 20 N1 A A 501 29.115 160.664 56.527 1.00 68.30 N
ATOM 21 C2 A A 501 29.930 159.639 56.236 1.00 68.40 C
ATOM 22 N3 A A 501 30.267 158.589 56.985 1.00 68.92 N
ATOM 23 C4 A A 501 29.655 158.646 58.182 1.00 69.55 C
ATOM 24 P G A 502 34.398 154.255 60.698 1.00 81.37 P
ATOM 25 OP1 G A 502 34.172 154.015 62.155 1.00 78.95 O
ATOM 26 OP2 G A 502 35.503 155.154 60.267 1.00 81.45 O
ATOM 27 O5' G A 502 34.610 152.839 59.998 1.00 82.77 O
TER
ATOM 1 O3' G B 475 25.941 163.611 55.607 1.00 52.15 O
ATOM 2 P U B 476 26.587 165.008 56.073 1.00 53.35 P
ATOM 3 OP1 U B 476 27.014 165.766 54.870 1.00 53.00 O
ATOM 4 OP2 U B 476 27.582 164.714 57.134 1.00 55.00 O
ATOM 5 O5' U B 476 25.373 165.758 56.779 1.00 53.28 O
ATOM 6 C5' U B 476 24.210 166.169 56.037 1.00 55.98 C
ATOM 7 C4' U B 476 23.032 166.322 56.968 1.00 57.76 C
ATOM 8 O4' U B 476 22.693 165.025 57.501 1.00 59.10 O
ATOM 9 C3' U B 476 23.280 167.158 58.215 1.00 59.92 C
ATOM 10 O3' U B 476 23.094 168.541 57.919 1.00 63.83 O
ATOM 11 C2' U B 476 22.195 166.659 59.166 1.00 59.83 C
ATOM 12 O2' U B 476 20.947 167.277 58.965 1.00 62.15 O
ATOM 13 C1' U B 476 22.058 165.191 58.753 1.00 59.18 C
ATOM 14 N1 U B 476 22.584 164.197 59.705 1.00 59.57 N
ATOM 15 C2 U B 476 21.869 163.989 60.878 1.00 59.73 C
ATOM 16 O2 U B 476 20.847 164.601 61.155 1.00 60.53 O
ATOM 17 N3 U B 476 22.397 163.039 61.715 1.00 59.05 N
ATOM 18 C4 U B 476 23.539 162.296 61.511 1.00 58.53 C
ATOM 19 O4 U B 476 23.894 161.491 62.370 1.00 59.41 O
ATOM 20 C5 U B 476 24.222 162.569 60.285 1.00 58.89 C
ATOM 21 C6 U B 476 23.737 163.487 59.446 1.00 58.50 C
ATOM 22 P A B 477 24.187 169.628 58.380 1.00 66.08 P
ATOM 23 OP1 A B 477 25.425 169.432 57.583 1.00 66.88 O
ATOM 24 OP2 A B 477 24.263 169.634 59.862 1.00 66.39 O
ATOM 25 O5' A B 477 23.543 171.008 57.912 1.00 66.98 O
TER
ATOM 2 P A A 501 28.913 156.781 63.611 1.00 55.28 P
ATOM 3 OP1 A A 501 28.503 155.752 64.605 1.00 54.65 O
ATOM 4 OP2 A A 501 29.262 158.147 64.068 1.00 56.25 O
ATOM 5 O5' A A 501 30.141 156.204 62.784 1.00 56.20 O
ATOM 6 C5' A A 501 30.087 154.891 62.223 1.00 60.59 C
ATOM 7 C4' A A 501 30.777 154.870 60.886 1.00 65.71 C
ATOM 8 O4' A A 501 29.949 155.550 59.908 1.00 66.74 O
ATOM 9 C3' A A 501 32.139 155.542 60.848 1.00 69.51 C
ATOM 10 O3' A A 501 33.036 154.807 60.045 1.00 75.22 O
ATOM 11 C2' A A 501 31.838 156.906 60.246 1.00 70.47 C
ATOM 12 O2' A A 501 32.929 157.459 59.536 1.00 72.15 O
ATOM 13 C1' A A 501 30.671 156.604 59.309 1.00 68.46 C
ATOM 14 N9 A A 501 29.787 157.768 59.232 1.00 69.10 N
ATOM 15 C8 A A 501 28.951 158.243 60.219 1.00 68.92 C
ATOM 16 N7 A A 501 28.338 159.358 59.906 1.00 68.77 N
ATOM 17 C5 A A 501 28.782 159.630 58.621 1.00 69.20 C
ATOM 18 C6 A A 501 28.515 160.688 57.740 1.00 69.49 C
ATOM 19 N6 A A 501 27.711 161.711 58.041 1.00 69.19 N
ATOM 20 N1 A A 501 29.115 160.664 56.527 1.00 68.30 N
ATOM 21 C2 A A 501 29.930 159.639 56.236 1.00 68.40 C
ATOM 22 N3 A A 501 30.267 158.589 56.985 1.00 68.92 N
ATOM 23 C4 A A 501 29.655 158.646 58.182 1.00 69.55 C
ATOM 24 P G A 502 34.398 154.255 60.698 1.00 81.37 P
ATOM 25 OP1 G A 502 34.172 154.015 62.155 1.00 78.95 O
ATOM 26 OP2 G A 502 35.503 155.154 60.267 1.00 81.45 O
ATOM 27 O5' G A 502 34.610 152.839 59.998 1.00 82.77 O
TER
ATOM 1 O3' G B 475 25.941 163.611 55.607 1.00 52.15 O
ATOM 2 P U B 476 26.587 165.008 56.073 1.00 53.35 P
ATOM 3 OP1 U B 476 27.014 165.766 54.870 1.00 53.00 O
ATOM 4 OP2 U B 476 27.582 164.714 57.134 1.00 55.00 O
ATOM 5 O5' U B 476 25.373 165.758 56.779 1.00 53.28 O
ATOM 6 C5' U B 476 24.210 166.169 56.037 1.00 55.98 C
ATOM 7 C4' U B 476 23.032 166.322 56.968 1.00 57.76 C
ATOM 8 O4' U B 476 22.693 165.025 57.501 1.00 59.10 O
ATOM 9 C3' U B 476 23.280 167.158 58.215 1.00 59.92 C
ATOM 10 O3' U B 476 23.094 168.541 57.919 1.00 63.83 O
ATOM 11 C2' U B 476 22.195 166.659 59.166 1.00 59.83 C
ATOM 12 O2' U B 476 20.947 167.277 58.965 1.00 62.15 O
ATOM 13 C1' U B 476 22.058 165.191 58.753 1.00 59.18 C
ATOM 14 N1 U B 476 22.584 164.197 59.705 1.00 59.57 N
ATOM 15 C2 U B 476 21.869 163.989 60.878 1.00 59.73 C
ATOM 16 O2 U B 476 20.847 164.601 61.155 1.00 60.53 O
ATOM 17 N3 U B 476 22.397 163.039 61.715 1.00 59.05 N
ATOM 18 C4 U B 476 23.539 162.296 61.511 1.00 58.53 C
ATOM 19 O4 U B 476 23.894 161.491 62.370 1.00 59.41 O
ATOM 20 C5 U B 476 24.222 162.569 60.285 1.00 58.89 C
ATOM 21 C6 U B 476 23.737 163.487 59.446 1.00 58.50 C
ATOM 22 P A B 477 24.187 169.628 58.380 1.00 66.08 P
ATOM 23 OP1 A B 477 25.425 169.432 57.583 1.00 66.88 O
ATOM 24 OP2 A B 477 24.263 169.634 59.862 1.00 66.39 O
ATOM 25 O5' A B 477 23.543 171.008 57.912 1.00 66.98 O
TER
Atoms:
OP1: (28.503,155.752,64.605)
OP2: (29.262,158.147,64.068)
C3': (32.139,155.542,60.848)
C1': (30.671,156.604,59.309)
C5': (30.087,154.891,62.223)
O4': (29.949,155.550,59.908)
C8: (28.951,158.243,60.219)
O2': (32.929,157.459,59.536)
C6: (28.515,160.688,57.740)
C5: (28.782,159.630,58.621)
C4: (29.655,158.646,58.182)
P: (28.913,156.781,63.611)
C4': (30.777,154.870,60.886)
C2': (31.838,156.906,60.246)
C2: (29.930,159.639,56.236)
N1: (29.115,160.664,56.527)
N3: (30.267,158.589,56.985)
N6: (27.711,161.711,58.041)
N7: (28.338,159.358,59.906)
N9: (29.787,157.768,59.232)
O5': (30.141,156.204,62.784)
O3': (33.036,154.807,60.045)
OP2: (29.262,158.147,64.068)
C3': (32.139,155.542,60.848)
C1': (30.671,156.604,59.309)
C5': (30.087,154.891,62.223)
O4': (29.949,155.550,59.908)
C8: (28.951,158.243,60.219)
O2': (32.929,157.459,59.536)
C6: (28.515,160.688,57.740)
C5: (28.782,159.630,58.621)
C4: (29.655,158.646,58.182)
P: (28.913,156.781,63.611)
C4': (30.777,154.870,60.886)
C2': (31.838,156.906,60.246)
C2: (29.930,159.639,56.236)
N1: (29.115,160.664,56.527)
N3: (30.267,158.589,56.985)
N6: (27.711,161.711,58.041)
N7: (28.338,159.358,59.906)
N9: (29.787,157.768,59.232)
O5': (30.141,156.204,62.784)
O3': (33.036,154.807,60.045)
C4: (23.539,162.296,61.511)
N3: (22.397,163.039,61.715)
OP1: (27.014,165.766,54.870)
OP2: (27.582,164.714,57.134)
C2: (21.869,163.989,60.878)
C1': (22.058,165.191,58.753)
C3': (23.280,167.158,58.215)
O5': (25.373,165.758,56.779)
O4': (22.693,165.025,57.501)
C5': (24.210,166.169,56.037)
P: (26.587,165.008,56.073)
C4': (23.032,166.322,56.968)
C2': (22.195,166.659,59.166)
O2': (20.947,167.277,58.965)
N1: (22.584,164.197,59.705)
O4: (23.894,161.491,62.370)
O2: (20.847,164.601,61.155)
C6: (23.737,163.487,59.446)
C5: (24.222,162.569,60.285)
O3': (23.094,168.541,57.919)
N3: (22.397,163.039,61.715)
OP1: (27.014,165.766,54.870)
OP2: (27.582,164.714,57.134)
C2: (21.869,163.989,60.878)
C1': (22.058,165.191,58.753)
C3': (23.280,167.158,58.215)
O5': (25.373,165.758,56.779)
O4': (22.693,165.025,57.501)
C5': (24.210,166.169,56.037)
P: (26.587,165.008,56.073)
C4': (23.032,166.322,56.968)
C2': (22.195,166.659,59.166)
O2': (20.947,167.277,58.965)
N1: (22.584,164.197,59.705)
O4: (23.894,161.491,62.370)
O2: (20.847,164.601,61.155)
C6: (23.737,163.487,59.446)
C5: (24.222,162.569,60.285)
O3': (23.094,168.541,57.919)
Image (generated by PyMOL):