Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0681:0720
Extra
PDB:
ATOM 1 O3' A A 680 65.250 74.375 45.633 1.00 47.17 O
ATOM 2 P A A 681 64.255 73.900 44.465 1.00 47.64 P
ATOM 3 OP1 A A 681 63.657 75.115 43.856 1.00 47.85 O
ATOM 4 OP2 A A 681 63.360 72.873 45.052 1.00 50.67 O
ATOM 5 O5' A A 681 65.226 73.213 43.401 1.00 47.87 O
ATOM 6 C5' A A 681 66.259 73.977 42.737 1.00 48.00 C
ATOM 7 C4' A A 681 67.258 73.059 42.070 1.00 48.63 C
ATOM 8 O4' A A 681 67.839 72.178 43.065 1.00 49.93 O
ATOM 9 C3' A A 681 66.705 72.113 41.015 1.00 49.43 C
ATOM 10 O3' A A 681 66.603 72.761 39.749 1.00 49.56 O
ATOM 11 C2' A A 681 67.743 71.001 41.002 1.00 48.79 C
ATOM 12 O2' A A 681 68.907 71.358 40.288 1.00 49.89 O
ATOM 13 C1' A A 681 68.099 70.908 42.485 1.00 49.90 C
ATOM 14 N9 A A 681 67.322 69.899 43.208 1.00 51.12 N
ATOM 15 C8 A A 681 66.097 70.044 43.814 1.00 51.92 C
ATOM 16 N7 A A 681 65.665 68.954 44.400 1.00 52.42 N
ATOM 17 C5 A A 681 66.670 68.029 44.163 1.00 52.49 C
ATOM 18 C6 A A 681 66.817 66.684 44.527 1.00 53.89 C
ATOM 19 N6 A A 681 65.919 66.013 45.247 1.00 55.35 N
ATOM 20 N1 A A 681 67.933 66.041 44.124 1.00 54.05 N
ATOM 21 C2 A A 681 68.834 66.717 43.404 1.00 53.67 C
ATOM 22 N3 A A 681 68.813 67.982 43.004 1.00 53.10 N
ATOM 23 C4 A A 681 67.692 68.593 43.423 1.00 52.04 C
ATOM 24 P A A 682 65.572 72.206 38.641 1.00 51.44 P
ATOM 25 OP1 A A 682 65.664 73.147 37.497 1.00 51.04 O
ATOM 26 OP2 A A 682 64.252 71.966 39.281 1.00 46.81 O
ATOM 27 O5' A A 682 66.199 70.804 38.200 1.00 49.50 O
TER
ATOM 1 O3' C B 719 64.128 64.344 47.490 1.00 49.84 O
ATOM 2 P U B 720 65.152 63.121 47.386 1.00 51.96 P
ATOM 3 OP1 U B 720 66.449 63.631 46.890 1.00 51.51 O
ATOM 4 OP2 U B 720 64.479 62.020 46.661 1.00 53.31 O
ATOM 5 O5' U B 720 65.345 62.691 48.903 1.00 52.13 O
ATOM 6 C5' U B 720 65.869 63.618 49.855 1.00 55.12 C
ATOM 7 C4' U B 720 65.782 63.047 51.247 1.00 57.34 C
ATOM 8 O4' U B 720 64.398 62.943 51.668 1.00 57.62 O
ATOM 9 C3' U B 720 66.314 61.639 51.419 1.00 57.66 C
ATOM 10 O3' U B 720 67.729 61.622 51.510 1.00 60.88 O
ATOM 11 C2' U B 720 65.641 61.208 52.711 1.00 56.74 C
ATOM 12 O2' U B 720 66.266 61.775 53.843 1.00 56.59 O
ATOM 13 C1' U B 720 64.256 61.836 52.543 1.00 57.93 C
ATOM 14 N1 U B 720 63.262 60.911 51.977 1.00 58.92 N
ATOM 15 C2 U B 720 62.378 60.311 52.849 1.00 58.77 C
ATOM 16 O2 U B 720 62.379 60.529 54.044 1.00 59.34 O
ATOM 17 N3 U B 720 61.484 59.449 52.267 1.00 60.03 N
ATOM 18 C4 U B 720 61.377 59.140 50.929 1.00 60.65 C
ATOM 19 O4 U B 720 60.501 58.358 50.553 1.00 60.24 O
ATOM 20 C5 U B 720 62.321 59.806 50.090 1.00 61.68 C
ATOM 21 C6 U B 720 63.211 60.646 50.630 1.00 60.60 C
ATOM 22 P U B 721 68.519 60.262 51.213 1.00 61.97 P
ATOM 23 OP1 U B 721 69.961 60.460 51.497 1.00 62.55 O
ATOM 24 OP2 U B 721 68.092 59.796 49.867 1.00 61.19 O
ATOM 25 O5' U B 721 67.930 59.265 52.304 1.00 67.31 O
TER
ATOM 2 P A A 681 64.255 73.900 44.465 1.00 47.64 P
ATOM 3 OP1 A A 681 63.657 75.115 43.856 1.00 47.85 O
ATOM 4 OP2 A A 681 63.360 72.873 45.052 1.00 50.67 O
ATOM 5 O5' A A 681 65.226 73.213 43.401 1.00 47.87 O
ATOM 6 C5' A A 681 66.259 73.977 42.737 1.00 48.00 C
ATOM 7 C4' A A 681 67.258 73.059 42.070 1.00 48.63 C
ATOM 8 O4' A A 681 67.839 72.178 43.065 1.00 49.93 O
ATOM 9 C3' A A 681 66.705 72.113 41.015 1.00 49.43 C
ATOM 10 O3' A A 681 66.603 72.761 39.749 1.00 49.56 O
ATOM 11 C2' A A 681 67.743 71.001 41.002 1.00 48.79 C
ATOM 12 O2' A A 681 68.907 71.358 40.288 1.00 49.89 O
ATOM 13 C1' A A 681 68.099 70.908 42.485 1.00 49.90 C
ATOM 14 N9 A A 681 67.322 69.899 43.208 1.00 51.12 N
ATOM 15 C8 A A 681 66.097 70.044 43.814 1.00 51.92 C
ATOM 16 N7 A A 681 65.665 68.954 44.400 1.00 52.42 N
ATOM 17 C5 A A 681 66.670 68.029 44.163 1.00 52.49 C
ATOM 18 C6 A A 681 66.817 66.684 44.527 1.00 53.89 C
ATOM 19 N6 A A 681 65.919 66.013 45.247 1.00 55.35 N
ATOM 20 N1 A A 681 67.933 66.041 44.124 1.00 54.05 N
ATOM 21 C2 A A 681 68.834 66.717 43.404 1.00 53.67 C
ATOM 22 N3 A A 681 68.813 67.982 43.004 1.00 53.10 N
ATOM 23 C4 A A 681 67.692 68.593 43.423 1.00 52.04 C
ATOM 24 P A A 682 65.572 72.206 38.641 1.00 51.44 P
ATOM 25 OP1 A A 682 65.664 73.147 37.497 1.00 51.04 O
ATOM 26 OP2 A A 682 64.252 71.966 39.281 1.00 46.81 O
ATOM 27 O5' A A 682 66.199 70.804 38.200 1.00 49.50 O
TER
ATOM 1 O3' C B 719 64.128 64.344 47.490 1.00 49.84 O
ATOM 2 P U B 720 65.152 63.121 47.386 1.00 51.96 P
ATOM 3 OP1 U B 720 66.449 63.631 46.890 1.00 51.51 O
ATOM 4 OP2 U B 720 64.479 62.020 46.661 1.00 53.31 O
ATOM 5 O5' U B 720 65.345 62.691 48.903 1.00 52.13 O
ATOM 6 C5' U B 720 65.869 63.618 49.855 1.00 55.12 C
ATOM 7 C4' U B 720 65.782 63.047 51.247 1.00 57.34 C
ATOM 8 O4' U B 720 64.398 62.943 51.668 1.00 57.62 O
ATOM 9 C3' U B 720 66.314 61.639 51.419 1.00 57.66 C
ATOM 10 O3' U B 720 67.729 61.622 51.510 1.00 60.88 O
ATOM 11 C2' U B 720 65.641 61.208 52.711 1.00 56.74 C
ATOM 12 O2' U B 720 66.266 61.775 53.843 1.00 56.59 O
ATOM 13 C1' U B 720 64.256 61.836 52.543 1.00 57.93 C
ATOM 14 N1 U B 720 63.262 60.911 51.977 1.00 58.92 N
ATOM 15 C2 U B 720 62.378 60.311 52.849 1.00 58.77 C
ATOM 16 O2 U B 720 62.379 60.529 54.044 1.00 59.34 O
ATOM 17 N3 U B 720 61.484 59.449 52.267 1.00 60.03 N
ATOM 18 C4 U B 720 61.377 59.140 50.929 1.00 60.65 C
ATOM 19 O4 U B 720 60.501 58.358 50.553 1.00 60.24 O
ATOM 20 C5 U B 720 62.321 59.806 50.090 1.00 61.68 C
ATOM 21 C6 U B 720 63.211 60.646 50.630 1.00 60.60 C
ATOM 22 P U B 721 68.519 60.262 51.213 1.00 61.97 P
ATOM 23 OP1 U B 721 69.961 60.460 51.497 1.00 62.55 O
ATOM 24 OP2 U B 721 68.092 59.796 49.867 1.00 61.19 O
ATOM 25 O5' U B 721 67.930 59.265 52.304 1.00 67.31 O
TER
Atoms:
OP1: (63.657,75.115,43.856)
OP2: (63.360,72.873,45.052)
C3': (66.705,72.113,41.015)
C1': (68.099,70.908,42.485)
C5': (66.259,73.977,42.737)
O4': (67.839,72.178,43.065)
C8: (66.097,70.044,43.814)
O2': (68.907,71.358,40.288)
C6: (66.817,66.684,44.527)
C5: (66.670,68.029,44.163)
C4: (67.692,68.593,43.423)
P: (64.255,73.900,44.465)
C4': (67.258,73.059,42.070)
C2': (67.743,71.001,41.002)
C2: (68.834,66.717,43.404)
N1: (67.933,66.041,44.124)
N3: (68.813,67.982,43.004)
N6: (65.919,66.013,45.247)
N7: (65.665,68.954,44.400)
N9: (67.322,69.899,43.208)
O5': (65.226,73.213,43.401)
O3': (66.603,72.761,39.749)
OP2: (63.360,72.873,45.052)
C3': (66.705,72.113,41.015)
C1': (68.099,70.908,42.485)
C5': (66.259,73.977,42.737)
O4': (67.839,72.178,43.065)
C8: (66.097,70.044,43.814)
O2': (68.907,71.358,40.288)
C6: (66.817,66.684,44.527)
C5: (66.670,68.029,44.163)
C4: (67.692,68.593,43.423)
P: (64.255,73.900,44.465)
C4': (67.258,73.059,42.070)
C2': (67.743,71.001,41.002)
C2: (68.834,66.717,43.404)
N1: (67.933,66.041,44.124)
N3: (68.813,67.982,43.004)
N6: (65.919,66.013,45.247)
N7: (65.665,68.954,44.400)
N9: (67.322,69.899,43.208)
O5': (65.226,73.213,43.401)
O3': (66.603,72.761,39.749)
C4: (61.377,59.140,50.929)
N3: (61.484,59.449,52.267)
OP1: (66.449,63.631,46.890)
OP2: (64.479,62.020,46.661)
C2: (62.378,60.311,52.849)
C1': (64.256,61.836,52.543)
C3': (66.314,61.639,51.419)
O5': (65.345,62.691,48.903)
O4': (64.398,62.943,51.668)
C5': (65.869,63.618,49.855)
P: (65.152,63.121,47.386)
C4': (65.782,63.047,51.247)
C2': (65.641,61.208,52.711)
O2': (66.266,61.775,53.843)
N1: (63.262,60.911,51.977)
O4: (60.501,58.358,50.553)
O2: (62.379,60.529,54.044)
C6: (63.211,60.646,50.630)
C5: (62.321,59.806,50.090)
O3': (67.729,61.622,51.510)
N3: (61.484,59.449,52.267)
OP1: (66.449,63.631,46.890)
OP2: (64.479,62.020,46.661)
C2: (62.378,60.311,52.849)
C1': (64.256,61.836,52.543)
C3': (66.314,61.639,51.419)
O5': (65.345,62.691,48.903)
O4': (64.398,62.943,51.668)
C5': (65.869,63.618,49.855)
P: (65.152,63.121,47.386)
C4': (65.782,63.047,51.247)
C2': (65.641,61.208,52.711)
O2': (66.266,61.775,53.843)
N1: (63.262,60.911,51.977)
O4: (60.501,58.358,50.553)
O2: (62.379,60.529,54.044)
C6: (63.211,60.646,50.630)
C5: (62.321,59.806,50.090)
O3': (67.729,61.622,51.510)
Image (generated by PyMOL):