Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01798:01793
Extra
PDB:
ATOM 1 O3' A A1797 86.692 137.727 93.317 1.00 29.18 O
ATOM 2 P A A1798 87.346 139.117 92.855 1.00 29.55 P
ATOM 3 OP1 A A1798 87.491 139.897 94.107 1.00 30.22 O
ATOM 4 OP2 A A1798 86.597 139.696 91.722 1.00 26.02 O
ATOM 5 O5' A A1798 88.802 138.707 92.353 1.00 29.70 O
ATOM 6 C5' A A1798 89.796 138.225 93.284 1.00 29.43 C
ATOM 7 C4' A A1798 91.027 139.100 93.236 1.00 28.85 C
ATOM 8 O4' A A1798 91.670 139.008 91.944 1.00 30.16 O
ATOM 9 C3' A A1798 90.790 140.586 93.446 1.00 29.59 C
ATOM 10 O3' A A1798 92.001 141.178 93.888 1.00 29.03 O
ATOM 11 C2' A A1798 90.490 141.060 92.032 1.00 29.93 C
ATOM 12 O2' A A1798 90.771 142.429 91.846 1.00 32.44 O
ATOM 13 C1' A A1798 91.452 140.202 91.212 1.00 30.46 C
ATOM 14 N9 A A1798 90.885 139.831 89.921 1.00 31.38 N
ATOM 15 C8 A A1798 90.360 138.613 89.576 1.00 30.73 C
ATOM 16 N7 A A1798 89.899 138.565 88.356 1.00 31.06 N
ATOM 17 C5 A A1798 90.128 139.835 87.857 1.00 31.99 C
ATOM 18 C6 A A1798 89.846 140.421 86.620 1.00 31.94 C
ATOM 19 N6 A A1798 89.227 139.781 85.633 1.00 33.02 N
ATOM 20 N1 A A1798 90.219 141.708 86.431 1.00 33.04 N
ATOM 21 C2 A A1798 90.827 142.350 87.437 1.00 29.79 C
ATOM 22 N3 A A1798 91.133 141.909 88.655 1.00 30.86 N
ATOM 23 C4 A A1798 90.751 140.626 88.805 1.00 32.75 C
ATOM 24 P C A1799 92.424 141.081 95.429 1.00 29.21 P
ATOM 25 OP1 C A1799 91.228 141.244 96.297 1.00 27.65 O
ATOM 26 OP2 C A1799 93.586 141.977 95.590 1.00 31.87 O
ATOM 27 O5' C A1799 92.924 139.591 95.607 1.00 27.54 O
TER
ATOM 1 O3' C B1792 89.703 138.526 81.893 1.00 31.12 O
ATOM 2 P U B1793 88.335 139.361 82.009 1.00 30.68 P
ATOM 3 OP1 U B1793 87.954 139.709 80.618 1.00 31.01 O
ATOM 4 OP2 U B1793 88.447 140.430 83.029 1.00 32.48 O
ATOM 5 O5' U B1793 87.294 138.304 82.571 1.00 31.32 O
ATOM 6 C5' U B1793 86.939 137.131 81.816 1.00 29.42 C
ATOM 7 C4' U B1793 86.316 136.113 82.729 1.00 27.16 C
ATOM 8 O4' U B1793 87.342 135.492 83.524 1.00 28.43 O
ATOM 9 C3' U B1793 85.402 136.710 83.787 1.00 26.37 C
ATOM 10 O3' U B1793 84.115 136.920 83.257 1.00 25.46 O
ATOM 11 C2' U B1793 85.373 135.637 84.870 1.00 27.92 C
ATOM 12 O2' U B1793 84.327 134.703 84.742 1.00 27.40 O
ATOM 13 C1' U B1793 86.734 134.954 84.677 1.00 29.08 C
ATOM 14 N1 U B1793 87.642 135.081 85.821 1.00 33.37 N
ATOM 15 C2 U B1793 88.126 133.908 86.351 1.00 36.84 C
ATOM 16 O2 U B1793 87.938 132.824 85.830 1.00 45.48 O
ATOM 17 N3 U B1793 88.851 134.041 87.502 1.00 35.37 N
ATOM 18 C4 U B1793 89.162 135.199 88.140 1.00 34.44 C
ATOM 19 O4 U B1793 89.737 135.145 89.228 1.00 34.94 O
ATOM 20 C5 U B1793 88.685 136.385 87.487 1.00 34.22 C
ATOM 21 C6 U B1793 87.963 136.289 86.375 1.00 30.20 C
ATOM 22 P A B1794 83.205 138.098 83.827 1.00 28.23 P
ATOM 23 OP1 A B1794 83.230 138.038 85.303 1.00 25.01 O
ATOM 24 OP2 A B1794 81.912 138.010 83.111 1.00 30.39 O
ATOM 25 O5' A B1794 83.941 139.424 83.352 1.00 29.04 O
TER
ATOM 2 P A A1798 87.346 139.117 92.855 1.00 29.55 P
ATOM 3 OP1 A A1798 87.491 139.897 94.107 1.00 30.22 O
ATOM 4 OP2 A A1798 86.597 139.696 91.722 1.00 26.02 O
ATOM 5 O5' A A1798 88.802 138.707 92.353 1.00 29.70 O
ATOM 6 C5' A A1798 89.796 138.225 93.284 1.00 29.43 C
ATOM 7 C4' A A1798 91.027 139.100 93.236 1.00 28.85 C
ATOM 8 O4' A A1798 91.670 139.008 91.944 1.00 30.16 O
ATOM 9 C3' A A1798 90.790 140.586 93.446 1.00 29.59 C
ATOM 10 O3' A A1798 92.001 141.178 93.888 1.00 29.03 O
ATOM 11 C2' A A1798 90.490 141.060 92.032 1.00 29.93 C
ATOM 12 O2' A A1798 90.771 142.429 91.846 1.00 32.44 O
ATOM 13 C1' A A1798 91.452 140.202 91.212 1.00 30.46 C
ATOM 14 N9 A A1798 90.885 139.831 89.921 1.00 31.38 N
ATOM 15 C8 A A1798 90.360 138.613 89.576 1.00 30.73 C
ATOM 16 N7 A A1798 89.899 138.565 88.356 1.00 31.06 N
ATOM 17 C5 A A1798 90.128 139.835 87.857 1.00 31.99 C
ATOM 18 C6 A A1798 89.846 140.421 86.620 1.00 31.94 C
ATOM 19 N6 A A1798 89.227 139.781 85.633 1.00 33.02 N
ATOM 20 N1 A A1798 90.219 141.708 86.431 1.00 33.04 N
ATOM 21 C2 A A1798 90.827 142.350 87.437 1.00 29.79 C
ATOM 22 N3 A A1798 91.133 141.909 88.655 1.00 30.86 N
ATOM 23 C4 A A1798 90.751 140.626 88.805 1.00 32.75 C
ATOM 24 P C A1799 92.424 141.081 95.429 1.00 29.21 P
ATOM 25 OP1 C A1799 91.228 141.244 96.297 1.00 27.65 O
ATOM 26 OP2 C A1799 93.586 141.977 95.590 1.00 31.87 O
ATOM 27 O5' C A1799 92.924 139.591 95.607 1.00 27.54 O
TER
ATOM 1 O3' C B1792 89.703 138.526 81.893 1.00 31.12 O
ATOM 2 P U B1793 88.335 139.361 82.009 1.00 30.68 P
ATOM 3 OP1 U B1793 87.954 139.709 80.618 1.00 31.01 O
ATOM 4 OP2 U B1793 88.447 140.430 83.029 1.00 32.48 O
ATOM 5 O5' U B1793 87.294 138.304 82.571 1.00 31.32 O
ATOM 6 C5' U B1793 86.939 137.131 81.816 1.00 29.42 C
ATOM 7 C4' U B1793 86.316 136.113 82.729 1.00 27.16 C
ATOM 8 O4' U B1793 87.342 135.492 83.524 1.00 28.43 O
ATOM 9 C3' U B1793 85.402 136.710 83.787 1.00 26.37 C
ATOM 10 O3' U B1793 84.115 136.920 83.257 1.00 25.46 O
ATOM 11 C2' U B1793 85.373 135.637 84.870 1.00 27.92 C
ATOM 12 O2' U B1793 84.327 134.703 84.742 1.00 27.40 O
ATOM 13 C1' U B1793 86.734 134.954 84.677 1.00 29.08 C
ATOM 14 N1 U B1793 87.642 135.081 85.821 1.00 33.37 N
ATOM 15 C2 U B1793 88.126 133.908 86.351 1.00 36.84 C
ATOM 16 O2 U B1793 87.938 132.824 85.830 1.00 45.48 O
ATOM 17 N3 U B1793 88.851 134.041 87.502 1.00 35.37 N
ATOM 18 C4 U B1793 89.162 135.199 88.140 1.00 34.44 C
ATOM 19 O4 U B1793 89.737 135.145 89.228 1.00 34.94 O
ATOM 20 C5 U B1793 88.685 136.385 87.487 1.00 34.22 C
ATOM 21 C6 U B1793 87.963 136.289 86.375 1.00 30.20 C
ATOM 22 P A B1794 83.205 138.098 83.827 1.00 28.23 P
ATOM 23 OP1 A B1794 83.230 138.038 85.303 1.00 25.01 O
ATOM 24 OP2 A B1794 81.912 138.010 83.111 1.00 30.39 O
ATOM 25 O5' A B1794 83.941 139.424 83.352 1.00 29.04 O
TER
Atoms:
OP1: (87.491,139.897,94.107)
OP2: (86.597,139.696,91.722)
C3': (90.790,140.586,93.446)
C1': (91.452,140.202,91.212)
C5': (89.796,138.225,93.284)
O4': (91.670,139.008,91.944)
C8: (90.360,138.613,89.576)
O2': (90.771,142.429,91.846)
C6: (89.846,140.421,86.620)
C5: (90.128,139.835,87.857)
C4: (90.751,140.626,88.805)
P: (87.346,139.117,92.855)
C4': (91.027,139.100,93.236)
C2': (90.490,141.060,92.032)
C2: (90.827,142.350,87.437)
N1: (90.219,141.708,86.431)
N3: (91.133,141.909,88.655)
N6: (89.227,139.781,85.633)
N7: (89.899,138.565,88.356)
N9: (90.885,139.831,89.921)
O5': (88.802,138.707,92.353)
O3': (92.001,141.178,93.888)
OP2: (86.597,139.696,91.722)
C3': (90.790,140.586,93.446)
C1': (91.452,140.202,91.212)
C5': (89.796,138.225,93.284)
O4': (91.670,139.008,91.944)
C8: (90.360,138.613,89.576)
O2': (90.771,142.429,91.846)
C6: (89.846,140.421,86.620)
C5: (90.128,139.835,87.857)
C4: (90.751,140.626,88.805)
P: (87.346,139.117,92.855)
C4': (91.027,139.100,93.236)
C2': (90.490,141.060,92.032)
C2: (90.827,142.350,87.437)
N1: (90.219,141.708,86.431)
N3: (91.133,141.909,88.655)
N6: (89.227,139.781,85.633)
N7: (89.899,138.565,88.356)
N9: (90.885,139.831,89.921)
O5': (88.802,138.707,92.353)
O3': (92.001,141.178,93.888)
C4: (89.162,135.199,88.140)
N3: (88.851,134.041,87.502)
OP1: (87.954,139.709,80.618)
OP2: (88.447,140.430,83.029)
C2: (88.126,133.908,86.351)
C1': (86.734,134.954,84.677)
C3': (85.402,136.710,83.787)
O5': (87.294,138.304,82.571)
O4': (87.342,135.492,83.524)
C5': (86.939,137.131,81.816)
P: (88.335,139.361,82.009)
C4': (86.316,136.113,82.729)
C2': (85.373,135.637,84.870)
O2': (84.327,134.703,84.742)
N1: (87.642,135.081,85.821)
O4: (89.737,135.145,89.228)
O2: (87.938,132.824,85.830)
C6: (87.963,136.289,86.375)
C5: (88.685,136.385,87.487)
O3': (84.115,136.920,83.257)
N3: (88.851,134.041,87.502)
OP1: (87.954,139.709,80.618)
OP2: (88.447,140.430,83.029)
C2: (88.126,133.908,86.351)
C1': (86.734,134.954,84.677)
C3': (85.402,136.710,83.787)
O5': (87.294,138.304,82.571)
O4': (87.342,135.492,83.524)
C5': (86.939,137.131,81.816)
P: (88.335,139.361,82.009)
C4': (86.316,136.113,82.729)
C2': (85.373,135.637,84.870)
O2': (84.327,134.703,84.742)
N1: (87.642,135.081,85.821)
O4: (89.737,135.145,89.228)
O2: (87.938,132.824,85.830)
C6: (87.963,136.289,86.375)
C5: (88.685,136.385,87.487)
O3': (84.115,136.920,83.257)
Image (generated by PyMOL):