Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02653:0521
Extra
PDB:
ATOM 1 O3' A A2652 25.732 138.182 125.410 1.00 44.28 O
ATOM 2 P A A2653 25.326 137.247 124.169 1.00 46.82 P
ATOM 3 OP1 A A2653 24.815 135.987 124.757 1.00 45.66 O
ATOM 4 OP2 A A2653 26.440 137.206 123.184 1.00 45.12 O
ATOM 5 O5' A A2653 24.104 138.002 123.483 1.00 47.08 O
ATOM 6 C5' A A2653 22.943 138.354 124.248 1.00 47.43 C
ATOM 7 C4' A A2653 21.688 138.002 123.486 1.00 47.13 C
ATOM 8 O4' A A2653 21.609 138.833 122.298 1.00 46.33 O
ATOM 9 C3' A A2653 21.572 136.557 123.007 1.00 46.49 C
ATOM 10 O3' A A2653 20.209 136.156 123.037 1.00 44.57 O
ATOM 11 C2' A A2653 22.042 136.650 121.557 1.00 46.43 C
ATOM 12 O2' A A2653 21.492 135.637 120.737 1.00 47.78 O
ATOM 13 C1' A A2653 21.491 138.013 121.154 1.00 45.84 C
ATOM 14 N9 A A2653 22.200 138.662 120.053 1.00 46.16 N
ATOM 15 C8 A A2653 23.467 139.185 120.051 1.00 45.94 C
ATOM 16 N7 A A2653 23.810 139.728 118.912 1.00 45.72 N
ATOM 17 C5 A A2653 22.698 139.545 118.107 1.00 46.44 C
ATOM 18 C6 A A2653 22.426 139.902 116.776 1.00 47.06 C
ATOM 19 N6 A A2653 23.291 140.548 115.997 1.00 45.17 N
ATOM 20 N1 A A2653 21.218 139.570 116.267 1.00 46.35 N
ATOM 21 C2 A A2653 20.352 138.924 117.053 1.00 47.34 C
ATOM 22 N3 A A2653 20.490 138.537 118.322 1.00 47.94 N
ATOM 23 C4 A A2653 21.701 138.883 118.794 1.00 46.70 C
ATOM 24 P G A2654 19.657 135.308 124.279 1.00 44.43 P
ATOM 25 OP1 G A2654 20.657 134.288 124.688 1.00 45.15 O
ATOM 26 OP2 G A2654 18.290 134.876 123.919 1.00 46.78 O
ATOM 27 O5' G A2654 19.548 136.385 125.447 1.00 43.67 O
TER
ATOM 1 O3' A B 520 24.735 141.087 111.227 1.00 38.91 O
ATOM 2 P U B 521 23.722 140.686 112.396 1.00 38.98 P
ATOM 3 OP1 U B 521 22.400 140.397 111.789 1.00 39.63 O
ATOM 4 OP2 U B 521 23.845 141.731 113.437 1.00 37.76 O
ATOM 5 O5' U B 521 24.331 139.325 112.949 1.00 38.25 O
ATOM 6 C5' U B 521 24.667 138.257 112.044 1.00 37.03 C
ATOM 7 C4' U B 521 24.273 136.932 112.639 1.00 38.05 C
ATOM 8 O4' U B 521 25.158 136.650 113.757 1.00 39.32 O
ATOM 9 C3' U B 521 22.851 136.856 113.189 1.00 37.69 C
ATOM 10 O3' U B 521 22.356 135.529 113.068 1.00 39.00 O
ATOM 11 C2' U B 521 23.056 137.176 114.668 1.00 38.39 C
ATOM 12 O2' U B 521 22.055 136.619 115.494 1.00 38.84 O
ATOM 13 C1' U B 521 24.399 136.498 114.940 1.00 37.55 C
ATOM 14 N1 U B 521 25.161 137.083 116.053 1.00 36.40 N
ATOM 15 C2 U B 521 25.166 136.410 117.268 1.00 35.94 C
ATOM 16 O2 U B 521 24.550 135.371 117.461 1.00 37.32 O
ATOM 17 N3 U B 521 25.917 137.001 118.251 1.00 33.62 N
ATOM 18 C4 U B 521 26.644 138.170 118.150 1.00 35.95 C
ATOM 19 O4 U B 521 27.281 138.572 119.122 1.00 37.72 O
ATOM 20 C5 U B 521 26.578 138.808 116.872 1.00 35.45 C
ATOM 21 C6 U B 521 25.858 138.260 115.894 1.00 35.54 C
ATOM 22 P C B 522 21.569 135.087 111.741 1.00 42.46 P
ATOM 23 OP1 C B 522 20.987 136.309 111.125 1.00 43.21 O
ATOM 24 OP2 C B 522 20.690 133.921 112.041 1.00 38.56 O
ATOM 25 O5' C B 522 22.733 134.591 110.784 1.00 40.65 O
TER
ATOM 2 P A A2653 25.326 137.247 124.169 1.00 46.82 P
ATOM 3 OP1 A A2653 24.815 135.987 124.757 1.00 45.66 O
ATOM 4 OP2 A A2653 26.440 137.206 123.184 1.00 45.12 O
ATOM 5 O5' A A2653 24.104 138.002 123.483 1.00 47.08 O
ATOM 6 C5' A A2653 22.943 138.354 124.248 1.00 47.43 C
ATOM 7 C4' A A2653 21.688 138.002 123.486 1.00 47.13 C
ATOM 8 O4' A A2653 21.609 138.833 122.298 1.00 46.33 O
ATOM 9 C3' A A2653 21.572 136.557 123.007 1.00 46.49 C
ATOM 10 O3' A A2653 20.209 136.156 123.037 1.00 44.57 O
ATOM 11 C2' A A2653 22.042 136.650 121.557 1.00 46.43 C
ATOM 12 O2' A A2653 21.492 135.637 120.737 1.00 47.78 O
ATOM 13 C1' A A2653 21.491 138.013 121.154 1.00 45.84 C
ATOM 14 N9 A A2653 22.200 138.662 120.053 1.00 46.16 N
ATOM 15 C8 A A2653 23.467 139.185 120.051 1.00 45.94 C
ATOM 16 N7 A A2653 23.810 139.728 118.912 1.00 45.72 N
ATOM 17 C5 A A2653 22.698 139.545 118.107 1.00 46.44 C
ATOM 18 C6 A A2653 22.426 139.902 116.776 1.00 47.06 C
ATOM 19 N6 A A2653 23.291 140.548 115.997 1.00 45.17 N
ATOM 20 N1 A A2653 21.218 139.570 116.267 1.00 46.35 N
ATOM 21 C2 A A2653 20.352 138.924 117.053 1.00 47.34 C
ATOM 22 N3 A A2653 20.490 138.537 118.322 1.00 47.94 N
ATOM 23 C4 A A2653 21.701 138.883 118.794 1.00 46.70 C
ATOM 24 P G A2654 19.657 135.308 124.279 1.00 44.43 P
ATOM 25 OP1 G A2654 20.657 134.288 124.688 1.00 45.15 O
ATOM 26 OP2 G A2654 18.290 134.876 123.919 1.00 46.78 O
ATOM 27 O5' G A2654 19.548 136.385 125.447 1.00 43.67 O
TER
ATOM 1 O3' A B 520 24.735 141.087 111.227 1.00 38.91 O
ATOM 2 P U B 521 23.722 140.686 112.396 1.00 38.98 P
ATOM 3 OP1 U B 521 22.400 140.397 111.789 1.00 39.63 O
ATOM 4 OP2 U B 521 23.845 141.731 113.437 1.00 37.76 O
ATOM 5 O5' U B 521 24.331 139.325 112.949 1.00 38.25 O
ATOM 6 C5' U B 521 24.667 138.257 112.044 1.00 37.03 C
ATOM 7 C4' U B 521 24.273 136.932 112.639 1.00 38.05 C
ATOM 8 O4' U B 521 25.158 136.650 113.757 1.00 39.32 O
ATOM 9 C3' U B 521 22.851 136.856 113.189 1.00 37.69 C
ATOM 10 O3' U B 521 22.356 135.529 113.068 1.00 39.00 O
ATOM 11 C2' U B 521 23.056 137.176 114.668 1.00 38.39 C
ATOM 12 O2' U B 521 22.055 136.619 115.494 1.00 38.84 O
ATOM 13 C1' U B 521 24.399 136.498 114.940 1.00 37.55 C
ATOM 14 N1 U B 521 25.161 137.083 116.053 1.00 36.40 N
ATOM 15 C2 U B 521 25.166 136.410 117.268 1.00 35.94 C
ATOM 16 O2 U B 521 24.550 135.371 117.461 1.00 37.32 O
ATOM 17 N3 U B 521 25.917 137.001 118.251 1.00 33.62 N
ATOM 18 C4 U B 521 26.644 138.170 118.150 1.00 35.95 C
ATOM 19 O4 U B 521 27.281 138.572 119.122 1.00 37.72 O
ATOM 20 C5 U B 521 26.578 138.808 116.872 1.00 35.45 C
ATOM 21 C6 U B 521 25.858 138.260 115.894 1.00 35.54 C
ATOM 22 P C B 522 21.569 135.087 111.741 1.00 42.46 P
ATOM 23 OP1 C B 522 20.987 136.309 111.125 1.00 43.21 O
ATOM 24 OP2 C B 522 20.690 133.921 112.041 1.00 38.56 O
ATOM 25 O5' C B 522 22.733 134.591 110.784 1.00 40.65 O
TER
Atoms:
OP1: (24.815,135.987,124.757)
OP2: (26.440,137.206,123.184)
C3': (21.572,136.557,123.007)
C1': (21.491,138.013,121.154)
C5': (22.943,138.354,124.248)
O4': (21.609,138.833,122.298)
C8: (23.467,139.185,120.051)
O2': (21.492,135.637,120.737)
C6: (22.426,139.902,116.776)
C5: (22.698,139.545,118.107)
C4: (21.701,138.883,118.794)
P: (25.326,137.247,124.169)
C4': (21.688,138.002,123.486)
C2': (22.042,136.650,121.557)
C2: (20.352,138.924,117.053)
N1: (21.218,139.570,116.267)
N3: (20.490,138.537,118.322)
N6: (23.291,140.548,115.997)
N7: (23.810,139.728,118.912)
N9: (22.200,138.662,120.053)
O5': (24.104,138.002,123.483)
O3': (20.209,136.156,123.037)
OP2: (26.440,137.206,123.184)
C3': (21.572,136.557,123.007)
C1': (21.491,138.013,121.154)
C5': (22.943,138.354,124.248)
O4': (21.609,138.833,122.298)
C8: (23.467,139.185,120.051)
O2': (21.492,135.637,120.737)
C6: (22.426,139.902,116.776)
C5: (22.698,139.545,118.107)
C4: (21.701,138.883,118.794)
P: (25.326,137.247,124.169)
C4': (21.688,138.002,123.486)
C2': (22.042,136.650,121.557)
C2: (20.352,138.924,117.053)
N1: (21.218,139.570,116.267)
N3: (20.490,138.537,118.322)
N6: (23.291,140.548,115.997)
N7: (23.810,139.728,118.912)
N9: (22.200,138.662,120.053)
O5': (24.104,138.002,123.483)
O3': (20.209,136.156,123.037)
C4: (26.644,138.170,118.150)
N3: (25.917,137.001,118.251)
OP1: (22.400,140.397,111.789)
OP2: (23.845,141.731,113.437)
C2: (25.166,136.410,117.268)
C1': (24.399,136.498,114.940)
C3': (22.851,136.856,113.189)
O5': (24.331,139.325,112.949)
O4': (25.158,136.650,113.757)
C5': (24.667,138.257,112.044)
P: (23.722,140.686,112.396)
C4': (24.273,136.932,112.639)
C2': (23.056,137.176,114.668)
O2': (22.055,136.619,115.494)
N1: (25.161,137.083,116.053)
O4: (27.281,138.572,119.122)
O2: (24.550,135.371,117.461)
C6: (25.858,138.260,115.894)
C5: (26.578,138.808,116.872)
O3': (22.356,135.529,113.068)
N3: (25.917,137.001,118.251)
OP1: (22.400,140.397,111.789)
OP2: (23.845,141.731,113.437)
C2: (25.166,136.410,117.268)
C1': (24.399,136.498,114.940)
C3': (22.851,136.856,113.189)
O5': (24.331,139.325,112.949)
O4': (25.158,136.650,113.757)
C5': (24.667,138.257,112.044)
P: (23.722,140.686,112.396)
C4': (24.273,136.932,112.639)
C2': (23.056,137.176,114.668)
O2': (22.055,136.619,115.494)
N1: (25.161,137.083,116.053)
O4: (27.281,138.572,119.122)
O2: (24.550,135.371,117.461)
C6: (25.858,138.260,115.894)
C5: (26.578,138.808,116.872)
O3': (22.356,135.529,113.068)
Image (generated by PyMOL):