Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0501:0476
Extra
PDB:
ATOM 1 O3' G A 500 27.734 157.084 62.464 1.00 52.98 O
ATOM 2 P A A 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 3 OP1 A A 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 4 OP2 A A 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 5 O5' A A 501 30.096 156.306 62.806 1.00 52.29 O
ATOM 6 C5' A A 501 29.992 155.003 62.226 1.00 56.06 C
ATOM 7 C4' A A 501 30.684 154.974 60.888 1.00 60.50 C
ATOM 8 O4' A A 501 29.874 155.674 59.908 1.00 61.05 O
ATOM 9 C3' A A 501 32.060 155.619 60.855 1.00 63.76 C
ATOM 10 O3' A A 501 32.945 154.881 60.041 1.00 69.30 O
ATOM 11 C2' A A 501 31.783 156.994 60.267 1.00 64.12 C
ATOM 12 O2' A A 501 32.887 157.531 59.569 1.00 66.61 O
ATOM 13 C1' A A 501 30.623 156.713 59.316 1.00 62.41 C
ATOM 14 N9 A A 501 29.761 157.892 59.215 1.00 62.64 N
ATOM 15 C8 A A 501 28.915 158.394 60.180 1.00 62.56 C
ATOM 16 N7 A A 501 28.319 159.510 59.836 1.00 62.43 N
ATOM 17 C5 A A 501 28.788 159.754 58.554 1.00 62.31 C
ATOM 18 C6 A A 501 28.546 160.796 57.647 1.00 62.48 C
ATOM 19 N6 A A 501 27.748 161.832 57.915 1.00 62.71 N
ATOM 20 N1 A A 501 29.165 160.742 56.445 1.00 61.39 N
ATOM 21 C2 A A 501 29.978 159.704 56.188 1.00 61.32 C
ATOM 22 N3 A A 501 30.293 158.667 56.965 1.00 61.27 N
ATOM 23 C4 A A 501 29.660 158.753 58.148 1.00 62.30 C
ATOM 24 P G A 502 34.359 154.414 60.647 1.00 75.44 P
ATOM 25 OP1 G A 502 34.215 154.253 62.125 1.00 72.78 O
ATOM 26 OP2 G A 502 35.408 155.324 60.106 1.00 75.61 O
ATOM 27 O5' G A 502 34.592 152.968 60.018 1.00 76.85 O
TER
ATOM 1 O3' G B 475 25.857 163.761 55.623 1.00 45.32 O
ATOM 2 P U B 476 26.468 165.172 56.102 1.00 46.44 P
ATOM 3 OP1 U B 476 26.879 165.957 54.911 1.00 44.39 O
ATOM 4 OP2 U B 476 27.462 164.909 57.174 1.00 47.75 O
ATOM 5 O5' U B 476 25.232 165.879 56.814 1.00 47.06 O
ATOM 6 C5' U B 476 24.079 166.311 56.073 1.00 48.62 C
ATOM 7 C4' U B 476 22.907 166.481 57.008 1.00 51.20 C
ATOM 8 O4' U B 476 22.551 165.187 57.541 1.00 52.65 O
ATOM 9 C3' U B 476 23.171 167.315 58.253 1.00 53.07 C
ATOM 10 O3' U B 476 22.996 168.698 57.962 1.00 57.32 O
ATOM 11 C2' U B 476 22.090 166.826 59.212 1.00 53.62 C
ATOM 12 O2' U B 476 20.841 167.448 59.011 1.00 55.19 O
ATOM 13 C1' U B 476 21.955 165.355 58.813 1.00 52.73 C
ATOM 14 N1 U B 476 22.514 164.363 59.748 1.00 52.41 N
ATOM 15 C2 U B 476 21.818 164.120 60.925 1.00 51.73 C
ATOM 16 O2 U B 476 20.794 164.711 61.228 1.00 52.09 O
ATOM 17 N3 U B 476 22.369 163.159 61.735 1.00 50.73 N
ATOM 18 C4 U B 476 23.517 162.439 61.503 1.00 49.80 C
ATOM 19 O4 U B 476 23.866 161.587 62.313 1.00 50.56 O
ATOM 20 C5 U B 476 24.188 162.757 60.282 1.00 51.28 C
ATOM 21 C6 U B 476 23.680 163.685 59.467 1.00 51.54 C
ATOM 22 P A B 477 24.096 169.772 58.434 1.00 59.51 P
ATOM 23 OP1 A B 477 25.340 169.543 57.660 1.00 60.05 O
ATOM 24 OP2 A B 477 24.144 169.779 59.917 1.00 59.98 O
ATOM 25 O5' A B 477 23.480 171.160 57.952 1.00 60.69 O
TER
ATOM 2 P A A 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 3 OP1 A A 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 4 OP2 A A 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 5 O5' A A 501 30.096 156.306 62.806 1.00 52.29 O
ATOM 6 C5' A A 501 29.992 155.003 62.226 1.00 56.06 C
ATOM 7 C4' A A 501 30.684 154.974 60.888 1.00 60.50 C
ATOM 8 O4' A A 501 29.874 155.674 59.908 1.00 61.05 O
ATOM 9 C3' A A 501 32.060 155.619 60.855 1.00 63.76 C
ATOM 10 O3' A A 501 32.945 154.881 60.041 1.00 69.30 O
ATOM 11 C2' A A 501 31.783 156.994 60.267 1.00 64.12 C
ATOM 12 O2' A A 501 32.887 157.531 59.569 1.00 66.61 O
ATOM 13 C1' A A 501 30.623 156.713 59.316 1.00 62.41 C
ATOM 14 N9 A A 501 29.761 157.892 59.215 1.00 62.64 N
ATOM 15 C8 A A 501 28.915 158.394 60.180 1.00 62.56 C
ATOM 16 N7 A A 501 28.319 159.510 59.836 1.00 62.43 N
ATOM 17 C5 A A 501 28.788 159.754 58.554 1.00 62.31 C
ATOM 18 C6 A A 501 28.546 160.796 57.647 1.00 62.48 C
ATOM 19 N6 A A 501 27.748 161.832 57.915 1.00 62.71 N
ATOM 20 N1 A A 501 29.165 160.742 56.445 1.00 61.39 N
ATOM 21 C2 A A 501 29.978 159.704 56.188 1.00 61.32 C
ATOM 22 N3 A A 501 30.293 158.667 56.965 1.00 61.27 N
ATOM 23 C4 A A 501 29.660 158.753 58.148 1.00 62.30 C
ATOM 24 P G A 502 34.359 154.414 60.647 1.00 75.44 P
ATOM 25 OP1 G A 502 34.215 154.253 62.125 1.00 72.78 O
ATOM 26 OP2 G A 502 35.408 155.324 60.106 1.00 75.61 O
ATOM 27 O5' G A 502 34.592 152.968 60.018 1.00 76.85 O
TER
ATOM 1 O3' G B 475 25.857 163.761 55.623 1.00 45.32 O
ATOM 2 P U B 476 26.468 165.172 56.102 1.00 46.44 P
ATOM 3 OP1 U B 476 26.879 165.957 54.911 1.00 44.39 O
ATOM 4 OP2 U B 476 27.462 164.909 57.174 1.00 47.75 O
ATOM 5 O5' U B 476 25.232 165.879 56.814 1.00 47.06 O
ATOM 6 C5' U B 476 24.079 166.311 56.073 1.00 48.62 C
ATOM 7 C4' U B 476 22.907 166.481 57.008 1.00 51.20 C
ATOM 8 O4' U B 476 22.551 165.187 57.541 1.00 52.65 O
ATOM 9 C3' U B 476 23.171 167.315 58.253 1.00 53.07 C
ATOM 10 O3' U B 476 22.996 168.698 57.962 1.00 57.32 O
ATOM 11 C2' U B 476 22.090 166.826 59.212 1.00 53.62 C
ATOM 12 O2' U B 476 20.841 167.448 59.011 1.00 55.19 O
ATOM 13 C1' U B 476 21.955 165.355 58.813 1.00 52.73 C
ATOM 14 N1 U B 476 22.514 164.363 59.748 1.00 52.41 N
ATOM 15 C2 U B 476 21.818 164.120 60.925 1.00 51.73 C
ATOM 16 O2 U B 476 20.794 164.711 61.228 1.00 52.09 O
ATOM 17 N3 U B 476 22.369 163.159 61.735 1.00 50.73 N
ATOM 18 C4 U B 476 23.517 162.439 61.503 1.00 49.80 C
ATOM 19 O4 U B 476 23.866 161.587 62.313 1.00 50.56 O
ATOM 20 C5 U B 476 24.188 162.757 60.282 1.00 51.28 C
ATOM 21 C6 U B 476 23.680 163.685 59.467 1.00 51.54 C
ATOM 22 P A B 477 24.096 169.772 58.434 1.00 59.51 P
ATOM 23 OP1 A B 477 25.340 169.543 57.660 1.00 60.05 O
ATOM 24 OP2 A B 477 24.144 169.779 59.917 1.00 59.98 O
ATOM 25 O5' A B 477 23.480 171.160 57.952 1.00 60.69 O
TER
Atoms:
OP1: (28.434,155.961,64.624)
OP2: (29.242,158.319,63.997)
C3': (32.060,155.619,60.855)
C1': (30.623,156.713,59.316)
C5': (29.992,155.003,62.226)
O4': (29.874,155.674,59.908)
C8: (28.915,158.394,60.180)
O2': (32.887,157.531,59.569)
C6: (28.546,160.796,57.647)
C5: (28.788,159.754,58.554)
C4: (29.660,158.753,58.148)
P: (28.871,156.942,63.593)
C4': (30.684,154.974,60.888)
C2': (31.783,156.994,60.267)
C2: (29.978,159.704,56.188)
N1: (29.165,160.742,56.445)
N3: (30.293,158.667,56.965)
N6: (27.748,161.832,57.915)
N7: (28.319,159.510,59.836)
N9: (29.761,157.892,59.215)
O5': (30.096,156.306,62.806)
O3': (32.945,154.881,60.041)
OP2: (29.242,158.319,63.997)
C3': (32.060,155.619,60.855)
C1': (30.623,156.713,59.316)
C5': (29.992,155.003,62.226)
O4': (29.874,155.674,59.908)
C8: (28.915,158.394,60.180)
O2': (32.887,157.531,59.569)
C6: (28.546,160.796,57.647)
C5: (28.788,159.754,58.554)
C4: (29.660,158.753,58.148)
P: (28.871,156.942,63.593)
C4': (30.684,154.974,60.888)
C2': (31.783,156.994,60.267)
C2: (29.978,159.704,56.188)
N1: (29.165,160.742,56.445)
N3: (30.293,158.667,56.965)
N6: (27.748,161.832,57.915)
N7: (28.319,159.510,59.836)
N9: (29.761,157.892,59.215)
O5': (30.096,156.306,62.806)
O3': (32.945,154.881,60.041)
C4: (23.517,162.439,61.503)
N3: (22.369,163.159,61.735)
OP1: (26.879,165.957,54.911)
OP2: (27.462,164.909,57.174)
C2: (21.818,164.120,60.925)
C1': (21.955,165.355,58.813)
C3': (23.171,167.315,58.253)
O5': (25.232,165.879,56.814)
O4': (22.551,165.187,57.541)
C5': (24.079,166.311,56.073)
P: (26.468,165.172,56.102)
C4': (22.907,166.481,57.008)
C2': (22.090,166.826,59.212)
O2': (20.841,167.448,59.011)
N1: (22.514,164.363,59.748)
O4: (23.866,161.587,62.313)
O2: (20.794,164.711,61.228)
C6: (23.680,163.685,59.467)
C5: (24.188,162.757,60.282)
O3': (22.996,168.698,57.962)
N3: (22.369,163.159,61.735)
OP1: (26.879,165.957,54.911)
OP2: (27.462,164.909,57.174)
C2: (21.818,164.120,60.925)
C1': (21.955,165.355,58.813)
C3': (23.171,167.315,58.253)
O5': (25.232,165.879,56.814)
O4': (22.551,165.187,57.541)
C5': (24.079,166.311,56.073)
P: (26.468,165.172,56.102)
C4': (22.907,166.481,57.008)
C2': (22.090,166.826,59.212)
O2': (20.841,167.448,59.011)
N1: (22.514,164.363,59.748)
O4: (23.866,161.587,62.313)
O2: (20.794,164.711,61.228)
C6: (23.680,163.685,59.467)
C5: (24.188,162.757,60.282)
O3': (22.996,168.698,57.962)
Image (generated by PyMOL):