Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0681:0720
Extra
PDB:
ATOM 1 O3' A A 680 65.228 74.520 45.609 1.00 42.79 O
ATOM 2 P A A 681 64.188 74.029 44.489 1.00 42.50 P
ATOM 3 OP1 A A 681 63.533 75.233 43.910 1.00 42.96 O
ATOM 4 OP2 A A 681 63.347 72.975 45.109 1.00 45.35 O
ATOM 5 O5' A A 681 65.122 73.366 43.380 1.00 42.61 O
ATOM 6 C5' A A 681 66.169 74.124 42.738 1.00 42.27 C
ATOM 7 C4' A A 681 67.177 73.197 42.097 1.00 43.90 C
ATOM 8 O4' A A 681 67.743 72.324 43.109 1.00 44.86 O
ATOM 9 C3' A A 681 66.629 72.242 41.049 1.00 44.88 C
ATOM 10 O3' A A 681 66.543 72.875 39.777 1.00 45.05 O
ATOM 11 C2' A A 681 67.663 71.127 41.057 1.00 44.40 C
ATOM 12 O2' A A 681 68.829 71.468 40.341 1.00 46.22 O
ATOM 13 C1' A A 681 68.009 71.050 42.543 1.00 45.48 C
ATOM 14 N9 A A 681 67.228 70.046 43.268 1.00 46.90 N
ATOM 15 C8 A A 681 66.017 70.205 43.897 1.00 47.56 C
ATOM 16 N7 A A 681 65.578 69.118 44.483 1.00 48.13 N
ATOM 17 C5 A A 681 66.563 68.177 44.219 1.00 48.61 C
ATOM 18 C6 A A 681 66.694 66.826 44.572 1.00 49.81 C
ATOM 19 N6 A A 681 65.804 66.167 45.312 1.00 50.55 N
ATOM 20 N1 A A 681 67.789 66.166 44.138 1.00 50.82 N
ATOM 21 C2 A A 681 68.687 66.833 43.402 1.00 50.02 C
ATOM 22 N3 A A 681 68.680 68.104 43.014 1.00 49.25 N
ATOM 23 C4 A A 681 67.578 68.730 43.462 1.00 47.79 C
ATOM 24 P A A 682 65.520 72.319 38.668 1.00 45.96 P
ATOM 25 OP1 A A 682 65.623 73.252 37.520 1.00 46.93 O
ATOM 26 OP2 A A 682 64.198 72.078 39.292 1.00 41.22 O
ATOM 27 O5' A A 682 66.145 70.918 38.230 1.00 45.66 O
TER
ATOM 1 O3' C B 719 64.089 64.502 47.450 1.00 44.81 O
ATOM 2 P U B 720 65.117 63.280 47.417 1.00 46.65 P
ATOM 3 OP1 U B 720 66.437 63.766 46.957 1.00 46.11 O
ATOM 4 OP2 U B 720 64.457 62.168 46.695 1.00 47.72 O
ATOM 5 O5' U B 720 65.266 62.890 48.950 1.00 46.57 O
ATOM 6 C5' U B 720 65.825 63.819 49.883 1.00 49.95 C
ATOM 7 C4' U B 720 65.738 63.271 51.285 1.00 52.61 C
ATOM 8 O4' U B 720 64.353 63.182 51.711 1.00 53.00 O
ATOM 9 C3' U B 720 66.250 61.857 51.460 1.00 53.40 C
ATOM 10 O3' U B 720 67.661 61.809 51.535 1.00 56.46 O
ATOM 11 C2' U B 720 65.582 61.438 52.757 1.00 52.57 C
ATOM 12 O2' U B 720 66.223 61.997 53.884 1.00 52.85 O
ATOM 13 C1' U B 720 64.203 62.075 52.590 1.00 53.49 C
ATOM 14 N1 U B 720 63.205 61.149 52.028 1.00 54.12 N
ATOM 15 C2 U B 720 62.364 60.504 52.913 1.00 53.77 C
ATOM 16 O2 U B 720 62.403 60.688 54.113 1.00 54.47 O
ATOM 17 N3 U B 720 61.468 59.640 52.339 1.00 53.98 N
ATOM 18 C4 U B 720 61.321 59.364 50.998 1.00 54.24 C
ATOM 19 O4 U B 720 60.449 58.571 50.632 1.00 54.08 O
ATOM 20 C5 U B 720 62.218 60.075 50.146 1.00 55.03 C
ATOM 21 C6 U B 720 63.108 60.921 50.675 1.00 54.75 C
ATOM 22 P U B 721 68.409 60.432 51.226 1.00 58.89 P
ATOM 23 OP1 U B 721 69.859 60.590 51.503 1.00 58.50 O
ATOM 24 OP2 U B 721 67.960 59.982 49.883 1.00 57.71 O
ATOM 25 O5' U B 721 67.791 59.448 52.312 1.00 63.87 O
TER
ATOM 2 P A A 681 64.188 74.029 44.489 1.00 42.50 P
ATOM 3 OP1 A A 681 63.533 75.233 43.910 1.00 42.96 O
ATOM 4 OP2 A A 681 63.347 72.975 45.109 1.00 45.35 O
ATOM 5 O5' A A 681 65.122 73.366 43.380 1.00 42.61 O
ATOM 6 C5' A A 681 66.169 74.124 42.738 1.00 42.27 C
ATOM 7 C4' A A 681 67.177 73.197 42.097 1.00 43.90 C
ATOM 8 O4' A A 681 67.743 72.324 43.109 1.00 44.86 O
ATOM 9 C3' A A 681 66.629 72.242 41.049 1.00 44.88 C
ATOM 10 O3' A A 681 66.543 72.875 39.777 1.00 45.05 O
ATOM 11 C2' A A 681 67.663 71.127 41.057 1.00 44.40 C
ATOM 12 O2' A A 681 68.829 71.468 40.341 1.00 46.22 O
ATOM 13 C1' A A 681 68.009 71.050 42.543 1.00 45.48 C
ATOM 14 N9 A A 681 67.228 70.046 43.268 1.00 46.90 N
ATOM 15 C8 A A 681 66.017 70.205 43.897 1.00 47.56 C
ATOM 16 N7 A A 681 65.578 69.118 44.483 1.00 48.13 N
ATOM 17 C5 A A 681 66.563 68.177 44.219 1.00 48.61 C
ATOM 18 C6 A A 681 66.694 66.826 44.572 1.00 49.81 C
ATOM 19 N6 A A 681 65.804 66.167 45.312 1.00 50.55 N
ATOM 20 N1 A A 681 67.789 66.166 44.138 1.00 50.82 N
ATOM 21 C2 A A 681 68.687 66.833 43.402 1.00 50.02 C
ATOM 22 N3 A A 681 68.680 68.104 43.014 1.00 49.25 N
ATOM 23 C4 A A 681 67.578 68.730 43.462 1.00 47.79 C
ATOM 24 P A A 682 65.520 72.319 38.668 1.00 45.96 P
ATOM 25 OP1 A A 682 65.623 73.252 37.520 1.00 46.93 O
ATOM 26 OP2 A A 682 64.198 72.078 39.292 1.00 41.22 O
ATOM 27 O5' A A 682 66.145 70.918 38.230 1.00 45.66 O
TER
ATOM 1 O3' C B 719 64.089 64.502 47.450 1.00 44.81 O
ATOM 2 P U B 720 65.117 63.280 47.417 1.00 46.65 P
ATOM 3 OP1 U B 720 66.437 63.766 46.957 1.00 46.11 O
ATOM 4 OP2 U B 720 64.457 62.168 46.695 1.00 47.72 O
ATOM 5 O5' U B 720 65.266 62.890 48.950 1.00 46.57 O
ATOM 6 C5' U B 720 65.825 63.819 49.883 1.00 49.95 C
ATOM 7 C4' U B 720 65.738 63.271 51.285 1.00 52.61 C
ATOM 8 O4' U B 720 64.353 63.182 51.711 1.00 53.00 O
ATOM 9 C3' U B 720 66.250 61.857 51.460 1.00 53.40 C
ATOM 10 O3' U B 720 67.661 61.809 51.535 1.00 56.46 O
ATOM 11 C2' U B 720 65.582 61.438 52.757 1.00 52.57 C
ATOM 12 O2' U B 720 66.223 61.997 53.884 1.00 52.85 O
ATOM 13 C1' U B 720 64.203 62.075 52.590 1.00 53.49 C
ATOM 14 N1 U B 720 63.205 61.149 52.028 1.00 54.12 N
ATOM 15 C2 U B 720 62.364 60.504 52.913 1.00 53.77 C
ATOM 16 O2 U B 720 62.403 60.688 54.113 1.00 54.47 O
ATOM 17 N3 U B 720 61.468 59.640 52.339 1.00 53.98 N
ATOM 18 C4 U B 720 61.321 59.364 50.998 1.00 54.24 C
ATOM 19 O4 U B 720 60.449 58.571 50.632 1.00 54.08 O
ATOM 20 C5 U B 720 62.218 60.075 50.146 1.00 55.03 C
ATOM 21 C6 U B 720 63.108 60.921 50.675 1.00 54.75 C
ATOM 22 P U B 721 68.409 60.432 51.226 1.00 58.89 P
ATOM 23 OP1 U B 721 69.859 60.590 51.503 1.00 58.50 O
ATOM 24 OP2 U B 721 67.960 59.982 49.883 1.00 57.71 O
ATOM 25 O5' U B 721 67.791 59.448 52.312 1.00 63.87 O
TER
Atoms:
OP1: (63.533,75.233,43.910)
OP2: (63.347,72.975,45.109)
C3': (66.629,72.242,41.049)
C1': (68.009,71.050,42.543)
C5': (66.169,74.124,42.738)
O4': (67.743,72.324,43.109)
C8: (66.017,70.205,43.897)
O2': (68.829,71.468,40.341)
C6: (66.694,66.826,44.572)
C5: (66.563,68.177,44.219)
C4: (67.578,68.730,43.462)
P: (64.188,74.029,44.489)
C4': (67.177,73.197,42.097)
C2': (67.663,71.127,41.057)
C2: (68.687,66.833,43.402)
N1: (67.789,66.166,44.138)
N3: (68.680,68.104,43.014)
N6: (65.804,66.167,45.312)
N7: (65.578,69.118,44.483)
N9: (67.228,70.046,43.268)
O5': (65.122,73.366,43.380)
O3': (66.543,72.875,39.777)
OP2: (63.347,72.975,45.109)
C3': (66.629,72.242,41.049)
C1': (68.009,71.050,42.543)
C5': (66.169,74.124,42.738)
O4': (67.743,72.324,43.109)
C8: (66.017,70.205,43.897)
O2': (68.829,71.468,40.341)
C6: (66.694,66.826,44.572)
C5: (66.563,68.177,44.219)
C4: (67.578,68.730,43.462)
P: (64.188,74.029,44.489)
C4': (67.177,73.197,42.097)
C2': (67.663,71.127,41.057)
C2: (68.687,66.833,43.402)
N1: (67.789,66.166,44.138)
N3: (68.680,68.104,43.014)
N6: (65.804,66.167,45.312)
N7: (65.578,69.118,44.483)
N9: (67.228,70.046,43.268)
O5': (65.122,73.366,43.380)
O3': (66.543,72.875,39.777)
C4: (61.321,59.364,50.998)
N3: (61.468,59.640,52.339)
OP1: (66.437,63.766,46.957)
OP2: (64.457,62.168,46.695)
C2: (62.364,60.504,52.913)
C1': (64.203,62.075,52.590)
C3': (66.250,61.857,51.460)
O5': (65.266,62.890,48.950)
O4': (64.353,63.182,51.711)
C5': (65.825,63.819,49.883)
P: (65.117,63.280,47.417)
C4': (65.738,63.271,51.285)
C2': (65.582,61.438,52.757)
O2': (66.223,61.997,53.884)
N1: (63.205,61.149,52.028)
O4: (60.449,58.571,50.632)
O2: (62.403,60.688,54.113)
C6: (63.108,60.921,50.675)
C5: (62.218,60.075,50.146)
O3': (67.661,61.809,51.535)
N3: (61.468,59.640,52.339)
OP1: (66.437,63.766,46.957)
OP2: (64.457,62.168,46.695)
C2: (62.364,60.504,52.913)
C1': (64.203,62.075,52.590)
C3': (66.250,61.857,51.460)
O5': (65.266,62.890,48.950)
O4': (64.353,63.182,51.711)
C5': (65.825,63.819,49.883)
P: (65.117,63.280,47.417)
C4': (65.738,63.271,51.285)
C2': (65.582,61.438,52.757)
O2': (66.223,61.997,53.884)
N1: (63.205,61.149,52.028)
O4: (60.449,58.571,50.632)
O2: (62.403,60.688,54.113)
C6: (63.108,60.921,50.675)
C5: (62.218,60.075,50.146)
O3': (67.661,61.809,51.535)
Image (generated by PyMOL):