ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02653:0521

Extra

PDB:
ATOM 1 O3' A A2652 25.854 137.993 125.287 1.00 45.37 O
ATOM 2 P A A2653 25.400 137.081 124.045 1.00 47.22 P
ATOM 3 OP1 A A2653 24.796 135.850 124.604 1.00 46.12 O
ATOM 4 OP2 A A2653 26.522 136.976 123.087 1.00 48.38 O
ATOM 5 O5' A A2653 24.242 137.911 123.342 1.00 49.05 O
ATOM 6 C5' A A2653 23.044 138.235 124.061 1.00 49.54 C
ATOM 7 C4' A A2653 21.828 137.840 123.261 1.00 47.97 C
ATOM 8 O4' A A2653 21.781 138.650 122.059 1.00 47.38 O
ATOM 9 C3' A A2653 21.749 136.384 122.805 1.00 47.79 C
ATOM 10 O3' A A2653 20.398 135.940 122.840 1.00 46.01 O
ATOM 11 C2' A A2653 22.230 136.455 121.356 1.00 48.29 C
ATOM 12 O2' A A2653 21.685 135.422 120.548 1.00 48.66 O
ATOM 13 C1' A A2653 21.686 137.813 120.927 1.00 47.38 C
ATOM 14 N9 A A2653 22.404 138.454 119.826 1.00 47.03 N
ATOM 15 C8 A A2653 23.682 138.952 119.806 1.00 46.38 C
ATOM 16 N7 A A2653 24.014 139.501 118.665 1.00 46.03 N
ATOM 17 C5 A A2653 22.882 139.349 117.878 1.00 46.50 C
ATOM 18 C6 A A2653 22.588 139.721 116.551 1.00 47.03 C
ATOM 19 N6 A A2653 23.441 140.356 115.754 1.00 46.37 N
ATOM 20 N1 A A2653 21.367 139.411 116.066 1.00 47.26 N
ATOM 21 C2 A A2653 20.506 138.774 116.866 1.00 48.65 C
ATOM 22 N3 A A2653 20.663 138.376 118.129 1.00 48.29 N
ATOM 23 C4 A A2653 21.887 138.697 118.578 1.00 46.86 C
ATOM 24 P G A2654 19.862 135.132 124.118 1.00 45.28 P
ATOM 25 OP1 G A2654 20.871 134.117 124.520 1.00 43.62 O
ATOM 26 OP2 G A2654 18.478 134.703 123.817 1.00 45.48 O
ATOM 27 O5' G A2654 19.785 136.248 125.251 1.00 43.45 O
TER

ATOM 1 O3' A B 520 24.842 140.837 110.973 1.00 38.45 O
ATOM 2 P U B 521 23.905 140.559 112.236 1.00 37.15 P
ATOM 3 OP1 U B 521 22.524 140.360 111.751 1.00 36.98 O
ATOM 4 OP2 U B 521 24.198 141.634 113.209 1.00 36.95 O
ATOM 5 O5' U B 521 24.452 139.178 112.810 1.00 34.84 O
ATOM 6 C5' U B 521 24.752 138.089 111.923 1.00 35.49 C
ATOM 7 C4' U B 521 24.363 136.776 112.555 1.00 37.50 C
ATOM 8 O4' U B 521 25.273 136.491 113.648 1.00 39.77 O
ATOM 9 C3' U B 521 22.955 136.702 113.140 1.00 38.09 C
ATOM 10 O3' U B 521 22.442 135.380 113.021 1.00 38.49 O
ATOM 11 C2' U B 521 23.194 137.013 114.613 1.00 37.83 C
ATOM 12 O2' U B 521 22.202 136.440 115.438 1.00 36.90 O
ATOM 13 C1' U B 521 24.546 136.340 114.851 1.00 37.38 C
ATOM 14 N1 U B 521 25.337 136.949 115.929 1.00 37.05 N
ATOM 15 C2 U B 521 25.372 136.313 117.159 1.00 36.35 C
ATOM 16 O2 U B 521 24.756 135.286 117.400 1.00 37.76 O
ATOM 17 N3 U B 521 26.155 136.929 118.102 1.00 35.67 N
ATOM 18 C4 U B 521 26.883 138.090 117.946 1.00 37.11 C
ATOM 19 O4 U B 521 27.533 138.529 118.893 1.00 39.01 O
ATOM 20 C5 U B 521 26.785 138.688 116.656 1.00 36.57 C
ATOM 21 C6 U B 521 26.035 138.115 115.717 1.00 36.45 C
ATOM 22 P C B 522 21.778 134.909 111.641 1.00 41.67 P
ATOM 23 OP1 C B 522 21.220 136.110 110.956 1.00 40.48 O
ATOM 24 OP2 C B 522 20.915 133.714 111.865 1.00 39.20 O
ATOM 25 O5' C B 522 23.027 134.452 110.781 1.00 40.58 O
TER

Atoms:
OP1: (24.796,135.850,124.604)
OP2: (26.522,136.976,123.087)
C3': (21.749,136.384,122.805)
C1': (21.686,137.813,120.927)
C5': (23.044,138.235,124.061)
O4': (21.781,138.650,122.059)
C8: (23.682,138.952,119.806)
O2': (21.685,135.422,120.548)
C6: (22.588,139.721,116.551)
C5: (22.882,139.349,117.878)
C4: (21.887,138.697,118.578)
P: (25.400,137.081,124.045)
C4': (21.828,137.840,123.261)
C2': (22.230,136.455,121.356)
C2: (20.506,138.774,116.866)
N1: (21.367,139.411,116.066)
N3: (20.663,138.376,118.129)
N6: (23.441,140.356,115.754)
N7: (24.014,139.501,118.665)
N9: (22.404,138.454,119.826)
O5': (24.242,137.911,123.342)
O3': (20.398,135.940,122.840)
C4: (26.883,138.090,117.946)
N3: (26.155,136.929,118.102)
OP1: (22.524,140.360,111.751)
OP2: (24.198,141.634,113.209)
C2: (25.372,136.313,117.159)
C1': (24.546,136.340,114.851)
C3': (22.955,136.702,113.140)
O5': (24.452,139.178,112.810)
O4': (25.273,136.491,113.648)
C5': (24.752,138.089,111.923)
P: (23.905,140.559,112.236)
C4': (24.363,136.776,112.555)
C2': (23.194,137.013,114.613)
O2': (22.202,136.440,115.438)
N1: (25.337,136.949,115.929)
O4: (27.533,138.529,118.893)
O2: (24.756,135.286,117.400)
C6: (26.035,138.115,115.717)
C5: (26.785,138.688,116.656)
O3': (22.442,135.380,113.021)
Image (generated by PyMOL):
PyMOL image
show in jmol