Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0501:0476
Extra
PDB:
ATOM 1 O3' G A 500 27.854 156.942 62.483 1.00 51.73 O
ATOM 2 P A A 501 29.010 156.722 63.567 1.00 51.15 P
ATOM 3 OP1 A A 501 28.576 155.716 64.575 1.00 50.05 O
ATOM 4 OP2 A A 501 29.415 158.083 64.004 1.00 51.94 O
ATOM 5 O5' A A 501 30.192 156.095 62.713 1.00 51.22 O
ATOM 6 C5' A A 501 30.046 154.819 62.089 1.00 55.73 C
ATOM 7 C4' A A 501 30.812 154.792 60.796 1.00 60.40 C
ATOM 8 O4' A A 501 30.062 155.503 59.779 1.00 61.19 O
ATOM 9 C3' A A 501 32.188 155.434 60.856 1.00 63.08 C
ATOM 10 O3' A A 501 33.127 154.709 60.094 1.00 67.43 O
ATOM 11 C2' A A 501 31.953 156.822 60.276 1.00 64.13 C
ATOM 12 O2' A A 501 33.096 157.340 59.626 1.00 66.31 O
ATOM 13 C1' A A 501 30.824 156.581 59.275 1.00 62.99 C
ATOM 14 N9 A A 501 29.945 157.751 59.221 1.00 64.45 N
ATOM 15 C8 A A 501 29.095 158.181 60.215 1.00 64.88 C
ATOM 16 N7 A A 501 28.454 159.287 59.927 1.00 64.48 N
ATOM 17 C5 A A 501 28.902 159.607 58.656 1.00 64.80 C
ATOM 18 C6 A A 501 28.610 160.678 57.803 1.00 65.07 C
ATOM 19 N6 A A 501 27.772 161.664 58.129 1.00 64.77 N
ATOM 20 N1 A A 501 29.220 160.707 56.594 1.00 65.04 N
ATOM 21 C2 A A 501 30.073 159.717 56.284 1.00 64.25 C
ATOM 22 N3 A A 501 30.437 158.660 57.008 1.00 64.23 N
ATOM 23 C4 A A 501 29.811 158.662 58.199 1.00 65.00 C
ATOM 24 P G A 502 34.516 154.275 60.774 1.00 72.27 P
ATOM 25 OP1 G A 502 34.321 154.177 62.250 1.00 69.99 O
ATOM 26 OP2 G A 502 35.579 155.164 60.229 1.00 72.56 O
ATOM 27 O5' G A 502 34.778 152.805 60.219 1.00 74.13 O
TER
ATOM 1 O3' G B 475 25.967 163.553 55.517 1.00 46.94 O
ATOM 2 P U B 476 26.649 164.911 56.033 1.00 47.28 P
ATOM 3 OP1 U B 476 27.078 165.708 54.856 1.00 45.06 O
ATOM 4 OP2 U B 476 27.654 164.551 57.068 1.00 48.61 O
ATOM 5 O5' U B 476 25.452 165.653 56.775 1.00 47.04 O
ATOM 6 C5' U B 476 24.256 166.024 56.069 1.00 49.87 C
ATOM 7 C4' U B 476 23.106 166.174 57.037 1.00 52.15 C
ATOM 8 O4' U B 476 22.800 164.885 57.609 1.00 53.32 O
ATOM 9 C3' U B 476 23.380 167.040 58.258 1.00 54.07 C
ATOM 10 O3' U B 476 23.176 168.413 57.944 1.00 57.80 O
ATOM 11 C2' U B 476 22.326 166.555 59.248 1.00 54.02 C
ATOM 12 O2' U B 476 21.072 167.173 59.060 1.00 55.43 O
ATOM 13 C1' U B 476 22.192 165.076 58.871 1.00 54.04 C
ATOM 14 N1 U B 476 22.720 164.087 59.829 1.00 54.54 N
ATOM 15 C2 U B 476 22.048 163.935 61.033 1.00 54.71 C
ATOM 16 O2 U B 476 21.088 164.615 61.350 1.00 56.09 O
ATOM 17 N3 U B 476 22.546 162.961 61.856 1.00 54.05 N
ATOM 18 C4 U B 476 23.630 162.150 61.618 1.00 54.23 C
ATOM 19 O4 U B 476 23.946 161.305 62.455 1.00 54.53 O
ATOM 20 C5 U B 476 24.288 162.385 60.371 1.00 54.46 C
ATOM 21 C6 U B 476 23.825 163.321 59.542 1.00 53.91 C
ATOM 22 P A B 477 24.237 169.519 58.422 1.00 59.85 P
ATOM 23 OP1 A B 477 25.485 169.361 57.634 1.00 60.69 O
ATOM 24 OP2 A B 477 24.296 169.492 59.905 1.00 59.62 O
ATOM 25 O5' A B 477 23.568 170.889 57.964 1.00 61.51 O
TER
ATOM 2 P A A 501 29.010 156.722 63.567 1.00 51.15 P
ATOM 3 OP1 A A 501 28.576 155.716 64.575 1.00 50.05 O
ATOM 4 OP2 A A 501 29.415 158.083 64.004 1.00 51.94 O
ATOM 5 O5' A A 501 30.192 156.095 62.713 1.00 51.22 O
ATOM 6 C5' A A 501 30.046 154.819 62.089 1.00 55.73 C
ATOM 7 C4' A A 501 30.812 154.792 60.796 1.00 60.40 C
ATOM 8 O4' A A 501 30.062 155.503 59.779 1.00 61.19 O
ATOM 9 C3' A A 501 32.188 155.434 60.856 1.00 63.08 C
ATOM 10 O3' A A 501 33.127 154.709 60.094 1.00 67.43 O
ATOM 11 C2' A A 501 31.953 156.822 60.276 1.00 64.13 C
ATOM 12 O2' A A 501 33.096 157.340 59.626 1.00 66.31 O
ATOM 13 C1' A A 501 30.824 156.581 59.275 1.00 62.99 C
ATOM 14 N9 A A 501 29.945 157.751 59.221 1.00 64.45 N
ATOM 15 C8 A A 501 29.095 158.181 60.215 1.00 64.88 C
ATOM 16 N7 A A 501 28.454 159.287 59.927 1.00 64.48 N
ATOM 17 C5 A A 501 28.902 159.607 58.656 1.00 64.80 C
ATOM 18 C6 A A 501 28.610 160.678 57.803 1.00 65.07 C
ATOM 19 N6 A A 501 27.772 161.664 58.129 1.00 64.77 N
ATOM 20 N1 A A 501 29.220 160.707 56.594 1.00 65.04 N
ATOM 21 C2 A A 501 30.073 159.717 56.284 1.00 64.25 C
ATOM 22 N3 A A 501 30.437 158.660 57.008 1.00 64.23 N
ATOM 23 C4 A A 501 29.811 158.662 58.199 1.00 65.00 C
ATOM 24 P G A 502 34.516 154.275 60.774 1.00 72.27 P
ATOM 25 OP1 G A 502 34.321 154.177 62.250 1.00 69.99 O
ATOM 26 OP2 G A 502 35.579 155.164 60.229 1.00 72.56 O
ATOM 27 O5' G A 502 34.778 152.805 60.219 1.00 74.13 O
TER
ATOM 1 O3' G B 475 25.967 163.553 55.517 1.00 46.94 O
ATOM 2 P U B 476 26.649 164.911 56.033 1.00 47.28 P
ATOM 3 OP1 U B 476 27.078 165.708 54.856 1.00 45.06 O
ATOM 4 OP2 U B 476 27.654 164.551 57.068 1.00 48.61 O
ATOM 5 O5' U B 476 25.452 165.653 56.775 1.00 47.04 O
ATOM 6 C5' U B 476 24.256 166.024 56.069 1.00 49.87 C
ATOM 7 C4' U B 476 23.106 166.174 57.037 1.00 52.15 C
ATOM 8 O4' U B 476 22.800 164.885 57.609 1.00 53.32 O
ATOM 9 C3' U B 476 23.380 167.040 58.258 1.00 54.07 C
ATOM 10 O3' U B 476 23.176 168.413 57.944 1.00 57.80 O
ATOM 11 C2' U B 476 22.326 166.555 59.248 1.00 54.02 C
ATOM 12 O2' U B 476 21.072 167.173 59.060 1.00 55.43 O
ATOM 13 C1' U B 476 22.192 165.076 58.871 1.00 54.04 C
ATOM 14 N1 U B 476 22.720 164.087 59.829 1.00 54.54 N
ATOM 15 C2 U B 476 22.048 163.935 61.033 1.00 54.71 C
ATOM 16 O2 U B 476 21.088 164.615 61.350 1.00 56.09 O
ATOM 17 N3 U B 476 22.546 162.961 61.856 1.00 54.05 N
ATOM 18 C4 U B 476 23.630 162.150 61.618 1.00 54.23 C
ATOM 19 O4 U B 476 23.946 161.305 62.455 1.00 54.53 O
ATOM 20 C5 U B 476 24.288 162.385 60.371 1.00 54.46 C
ATOM 21 C6 U B 476 23.825 163.321 59.542 1.00 53.91 C
ATOM 22 P A B 477 24.237 169.519 58.422 1.00 59.85 P
ATOM 23 OP1 A B 477 25.485 169.361 57.634 1.00 60.69 O
ATOM 24 OP2 A B 477 24.296 169.492 59.905 1.00 59.62 O
ATOM 25 O5' A B 477 23.568 170.889 57.964 1.00 61.51 O
TER
Atoms:
OP1: (28.576,155.716,64.575)
OP2: (29.415,158.083,64.004)
C3': (32.188,155.434,60.856)
C1': (30.824,156.581,59.275)
C5': (30.046,154.819,62.089)
O4': (30.062,155.503,59.779)
C8: (29.095,158.181,60.215)
O2': (33.096,157.340,59.626)
C6: (28.610,160.678,57.803)
C5: (28.902,159.607,58.656)
C4: (29.811,158.662,58.199)
P: (29.010,156.722,63.567)
C4': (30.812,154.792,60.796)
C2': (31.953,156.822,60.276)
C2: (30.073,159.717,56.284)
N1: (29.220,160.707,56.594)
N3: (30.437,158.660,57.008)
N6: (27.772,161.664,58.129)
N7: (28.454,159.287,59.927)
N9: (29.945,157.751,59.221)
O5': (30.192,156.095,62.713)
O3': (33.127,154.709,60.094)
OP2: (29.415,158.083,64.004)
C3': (32.188,155.434,60.856)
C1': (30.824,156.581,59.275)
C5': (30.046,154.819,62.089)
O4': (30.062,155.503,59.779)
C8: (29.095,158.181,60.215)
O2': (33.096,157.340,59.626)
C6: (28.610,160.678,57.803)
C5: (28.902,159.607,58.656)
C4: (29.811,158.662,58.199)
P: (29.010,156.722,63.567)
C4': (30.812,154.792,60.796)
C2': (31.953,156.822,60.276)
C2: (30.073,159.717,56.284)
N1: (29.220,160.707,56.594)
N3: (30.437,158.660,57.008)
N6: (27.772,161.664,58.129)
N7: (28.454,159.287,59.927)
N9: (29.945,157.751,59.221)
O5': (30.192,156.095,62.713)
O3': (33.127,154.709,60.094)
C4: (23.630,162.150,61.618)
N3: (22.546,162.961,61.856)
OP1: (27.078,165.708,54.856)
OP2: (27.654,164.551,57.068)
C2: (22.048,163.935,61.033)
C1': (22.192,165.076,58.871)
C3': (23.380,167.040,58.258)
O5': (25.452,165.653,56.775)
O4': (22.800,164.885,57.609)
C5': (24.256,166.024,56.069)
P: (26.649,164.911,56.033)
C4': (23.106,166.174,57.037)
C2': (22.326,166.555,59.248)
O2': (21.072,167.173,59.060)
N1: (22.720,164.087,59.829)
O4: (23.946,161.305,62.455)
O2: (21.088,164.615,61.350)
C6: (23.825,163.321,59.542)
C5: (24.288,162.385,60.371)
O3': (23.176,168.413,57.944)
N3: (22.546,162.961,61.856)
OP1: (27.078,165.708,54.856)
OP2: (27.654,164.551,57.068)
C2: (22.048,163.935,61.033)
C1': (22.192,165.076,58.871)
C3': (23.380,167.040,58.258)
O5': (25.452,165.653,56.775)
O4': (22.800,164.885,57.609)
C5': (24.256,166.024,56.069)
P: (26.649,164.911,56.033)
C4': (23.106,166.174,57.037)
C2': (22.326,166.555,59.248)
O2': (21.072,167.173,59.060)
N1: (22.720,164.087,59.829)
O4: (23.946,161.305,62.455)
O2: (21.088,164.615,61.350)
C6: (23.825,163.321,59.542)
C5: (24.288,162.385,60.371)
O3': (23.176,168.413,57.944)
Image (generated by PyMOL):