Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02653:0521
Extra
PDB:
ATOM 1 O3' A A2652 25.900 138.341 125.808 1.00 54.63 O
ATOM 2 P A A2653 25.464 137.425 124.562 1.00 56.29 P
ATOM 3 OP1 A A2653 24.950 136.163 125.145 1.00 53.88 O
ATOM 4 OP2 A A2653 26.556 137.381 123.555 1.00 55.16 O
ATOM 5 O5' A A2653 24.247 138.211 123.898 1.00 57.53 O
ATOM 6 C5' A A2653 23.046 138.474 124.645 1.00 57.82 C
ATOM 7 C4' A A2653 21.829 138.068 123.845 1.00 56.98 C
ATOM 8 O4' A A2653 21.743 138.890 122.652 1.00 55.92 O
ATOM 9 C3' A A2653 21.786 136.622 123.364 1.00 56.26 C
ATOM 10 O3' A A2653 20.427 136.204 123.318 1.00 54.86 O
ATOM 11 C2' A A2653 22.344 136.737 121.948 1.00 57.38 C
ATOM 12 O2' A A2653 21.955 135.677 121.091 1.00 60.06 O
ATOM 13 C1' A A2653 21.734 138.066 121.507 1.00 55.60 C
ATOM 14 N9 A A2653 22.439 138.776 120.440 1.00 54.29 N
ATOM 15 C8 A A2653 23.674 139.376 120.473 1.00 53.34 C
ATOM 16 N7 A A2653 23.996 139.981 119.354 1.00 52.47 N
ATOM 17 C5 A A2653 22.904 139.758 118.528 1.00 51.94 C
ATOM 18 C6 A A2653 22.621 140.144 117.206 1.00 50.94 C
ATOM 19 N6 A A2653 23.429 140.883 116.462 1.00 50.00 N
ATOM 20 N1 A A2653 21.455 139.740 116.670 1.00 51.73 N
ATOM 21 C2 A A2653 20.627 139.005 117.422 1.00 54.85 C
ATOM 22 N3 A A2653 20.773 138.588 118.681 1.00 54.55 N
ATOM 23 C4 A A2653 21.947 139.004 119.180 1.00 53.32 C
ATOM 24 P G A2654 19.787 135.437 124.573 1.00 56.29 P
ATOM 25 OP1 G A2654 20.704 134.365 125.033 1.00 54.88 O
ATOM 26 OP2 G A2654 18.402 135.095 124.181 1.00 56.20 O
ATOM 27 O5' G A2654 19.720 136.545 125.717 1.00 55.47 O
TER
ATOM 1 O3' A B 520 24.867 141.270 111.552 1.00 45.11 O
ATOM 2 P U B 521 23.846 140.921 112.733 1.00 43.33 P
ATOM 3 OP1 U B 521 22.500 140.785 112.133 1.00 43.18 O
ATOM 4 OP2 U B 521 24.076 141.919 113.799 1.00 42.83 O
ATOM 5 O5' U B 521 24.344 139.497 113.242 1.00 40.91 O
ATOM 6 C5' U B 521 24.648 138.459 112.295 1.00 42.31 C
ATOM 7 C4' U B 521 24.335 137.109 112.882 1.00 44.58 C
ATOM 8 O4' U B 521 25.292 136.844 113.934 1.00 46.25 O
ATOM 9 C3' U B 521 22.951 136.965 113.513 1.00 46.33 C
ATOM 10 O3' U B 521 22.476 135.633 113.373 1.00 47.06 O
ATOM 11 C2' U B 521 23.227 137.249 114.982 1.00 46.42 C
ATOM 12 O2' U B 521 22.299 136.618 115.836 1.00 45.89 O
ATOM 13 C1' U B 521 24.609 136.628 115.151 1.00 46.01 C
ATOM 14 N1 U B 521 25.391 137.243 116.228 1.00 45.38 N
ATOM 15 C2 U B 521 25.435 136.587 117.437 1.00 45.63 C
ATOM 16 O2 U B 521 24.847 135.537 117.640 1.00 47.97 O
ATOM 17 N3 U B 521 26.190 137.201 118.402 1.00 44.47 N
ATOM 18 C4 U B 521 26.890 138.381 118.276 1.00 46.24 C
ATOM 19 O4 U B 521 27.577 138.786 119.217 1.00 48.21 O
ATOM 20 C5 U B 521 26.781 139.002 116.994 1.00 46.69 C
ATOM 21 C6 U B 521 26.055 138.426 116.039 1.00 45.43 C
ATOM 22 P C B 522 21.760 135.192 112.010 1.00 50.94 P
ATOM 23 OP1 C B 522 21.218 136.425 111.390 1.00 53.18 O
ATOM 24 OP2 C B 522 20.871 134.009 112.220 1.00 48.52 O
ATOM 25 O5' C B 522 22.971 134.755 111.085 1.00 52.56 O
TER
ATOM 2 P A A2653 25.464 137.425 124.562 1.00 56.29 P
ATOM 3 OP1 A A2653 24.950 136.163 125.145 1.00 53.88 O
ATOM 4 OP2 A A2653 26.556 137.381 123.555 1.00 55.16 O
ATOM 5 O5' A A2653 24.247 138.211 123.898 1.00 57.53 O
ATOM 6 C5' A A2653 23.046 138.474 124.645 1.00 57.82 C
ATOM 7 C4' A A2653 21.829 138.068 123.845 1.00 56.98 C
ATOM 8 O4' A A2653 21.743 138.890 122.652 1.00 55.92 O
ATOM 9 C3' A A2653 21.786 136.622 123.364 1.00 56.26 C
ATOM 10 O3' A A2653 20.427 136.204 123.318 1.00 54.86 O
ATOM 11 C2' A A2653 22.344 136.737 121.948 1.00 57.38 C
ATOM 12 O2' A A2653 21.955 135.677 121.091 1.00 60.06 O
ATOM 13 C1' A A2653 21.734 138.066 121.507 1.00 55.60 C
ATOM 14 N9 A A2653 22.439 138.776 120.440 1.00 54.29 N
ATOM 15 C8 A A2653 23.674 139.376 120.473 1.00 53.34 C
ATOM 16 N7 A A2653 23.996 139.981 119.354 1.00 52.47 N
ATOM 17 C5 A A2653 22.904 139.758 118.528 1.00 51.94 C
ATOM 18 C6 A A2653 22.621 140.144 117.206 1.00 50.94 C
ATOM 19 N6 A A2653 23.429 140.883 116.462 1.00 50.00 N
ATOM 20 N1 A A2653 21.455 139.740 116.670 1.00 51.73 N
ATOM 21 C2 A A2653 20.627 139.005 117.422 1.00 54.85 C
ATOM 22 N3 A A2653 20.773 138.588 118.681 1.00 54.55 N
ATOM 23 C4 A A2653 21.947 139.004 119.180 1.00 53.32 C
ATOM 24 P G A2654 19.787 135.437 124.573 1.00 56.29 P
ATOM 25 OP1 G A2654 20.704 134.365 125.033 1.00 54.88 O
ATOM 26 OP2 G A2654 18.402 135.095 124.181 1.00 56.20 O
ATOM 27 O5' G A2654 19.720 136.545 125.717 1.00 55.47 O
TER
ATOM 1 O3' A B 520 24.867 141.270 111.552 1.00 45.11 O
ATOM 2 P U B 521 23.846 140.921 112.733 1.00 43.33 P
ATOM 3 OP1 U B 521 22.500 140.785 112.133 1.00 43.18 O
ATOM 4 OP2 U B 521 24.076 141.919 113.799 1.00 42.83 O
ATOM 5 O5' U B 521 24.344 139.497 113.242 1.00 40.91 O
ATOM 6 C5' U B 521 24.648 138.459 112.295 1.00 42.31 C
ATOM 7 C4' U B 521 24.335 137.109 112.882 1.00 44.58 C
ATOM 8 O4' U B 521 25.292 136.844 113.934 1.00 46.25 O
ATOM 9 C3' U B 521 22.951 136.965 113.513 1.00 46.33 C
ATOM 10 O3' U B 521 22.476 135.633 113.373 1.00 47.06 O
ATOM 11 C2' U B 521 23.227 137.249 114.982 1.00 46.42 C
ATOM 12 O2' U B 521 22.299 136.618 115.836 1.00 45.89 O
ATOM 13 C1' U B 521 24.609 136.628 115.151 1.00 46.01 C
ATOM 14 N1 U B 521 25.391 137.243 116.228 1.00 45.38 N
ATOM 15 C2 U B 521 25.435 136.587 117.437 1.00 45.63 C
ATOM 16 O2 U B 521 24.847 135.537 117.640 1.00 47.97 O
ATOM 17 N3 U B 521 26.190 137.201 118.402 1.00 44.47 N
ATOM 18 C4 U B 521 26.890 138.381 118.276 1.00 46.24 C
ATOM 19 O4 U B 521 27.577 138.786 119.217 1.00 48.21 O
ATOM 20 C5 U B 521 26.781 139.002 116.994 1.00 46.69 C
ATOM 21 C6 U B 521 26.055 138.426 116.039 1.00 45.43 C
ATOM 22 P C B 522 21.760 135.192 112.010 1.00 50.94 P
ATOM 23 OP1 C B 522 21.218 136.425 111.390 1.00 53.18 O
ATOM 24 OP2 C B 522 20.871 134.009 112.220 1.00 48.52 O
ATOM 25 O5' C B 522 22.971 134.755 111.085 1.00 52.56 O
TER
Atoms:
OP1: (24.950,136.163,125.145)
OP2: (26.556,137.381,123.555)
C3': (21.786,136.622,123.364)
C1': (21.734,138.066,121.507)
C5': (23.046,138.474,124.645)
O4': (21.743,138.890,122.652)
C8: (23.674,139.376,120.473)
O2': (21.955,135.677,121.091)
C6: (22.621,140.144,117.206)
C5: (22.904,139.758,118.528)
C4: (21.947,139.004,119.180)
P: (25.464,137.425,124.562)
C4': (21.829,138.068,123.845)
C2': (22.344,136.737,121.948)
C2: (20.627,139.005,117.422)
N1: (21.455,139.740,116.670)
N3: (20.773,138.588,118.681)
N6: (23.429,140.883,116.462)
N7: (23.996,139.981,119.354)
N9: (22.439,138.776,120.440)
O5': (24.247,138.211,123.898)
O3': (20.427,136.204,123.318)
OP2: (26.556,137.381,123.555)
C3': (21.786,136.622,123.364)
C1': (21.734,138.066,121.507)
C5': (23.046,138.474,124.645)
O4': (21.743,138.890,122.652)
C8: (23.674,139.376,120.473)
O2': (21.955,135.677,121.091)
C6: (22.621,140.144,117.206)
C5: (22.904,139.758,118.528)
C4: (21.947,139.004,119.180)
P: (25.464,137.425,124.562)
C4': (21.829,138.068,123.845)
C2': (22.344,136.737,121.948)
C2: (20.627,139.005,117.422)
N1: (21.455,139.740,116.670)
N3: (20.773,138.588,118.681)
N6: (23.429,140.883,116.462)
N7: (23.996,139.981,119.354)
N9: (22.439,138.776,120.440)
O5': (24.247,138.211,123.898)
O3': (20.427,136.204,123.318)
C4: (26.890,138.381,118.276)
N3: (26.190,137.201,118.402)
OP1: (22.500,140.785,112.133)
OP2: (24.076,141.919,113.799)
C2: (25.435,136.587,117.437)
C1': (24.609,136.628,115.151)
C3': (22.951,136.965,113.513)
O5': (24.344,139.497,113.242)
O4': (25.292,136.844,113.934)
C5': (24.648,138.459,112.295)
P: (23.846,140.921,112.733)
C4': (24.335,137.109,112.882)
C2': (23.227,137.249,114.982)
O2': (22.299,136.618,115.836)
N1: (25.391,137.243,116.228)
O4: (27.577,138.786,119.217)
O2: (24.847,135.537,117.640)
C6: (26.055,138.426,116.039)
C5: (26.781,139.002,116.994)
O3': (22.476,135.633,113.373)
N3: (26.190,137.201,118.402)
OP1: (22.500,140.785,112.133)
OP2: (24.076,141.919,113.799)
C2: (25.435,136.587,117.437)
C1': (24.609,136.628,115.151)
C3': (22.951,136.965,113.513)
O5': (24.344,139.497,113.242)
O4': (25.292,136.844,113.934)
C5': (24.648,138.459,112.295)
P: (23.846,140.921,112.733)
C4': (24.335,137.109,112.882)
C2': (23.227,137.249,114.982)
O2': (22.299,136.618,115.836)
N1: (25.391,137.243,116.228)
O4: (27.577,138.786,119.217)
O2: (24.847,135.537,117.640)
C6: (26.055,138.426,116.039)
C5: (26.781,139.002,116.994)
O3': (22.476,135.633,113.373)
Image (generated by PyMOL):