Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0501:0476
Extra
PDB:
ATOM 1 O3' G A 500 27.858 157.353 62.730 1.00 65.22 O
ATOM 2 P A A 501 29.022 157.152 63.816 1.00 66.77 P
ATOM 3 OP1 A A 501 28.628 156.096 64.795 1.00 63.94 O
ATOM 4 OP2 A A 501 29.367 158.515 64.300 1.00 67.96 O
ATOM 5 O5' A A 501 30.241 156.611 62.949 1.00 66.15 O
ATOM 6 C5' A A 501 30.204 155.305 62.370 1.00 69.79 C
ATOM 7 C4' A A 501 31.030 155.276 61.117 1.00 73.85 C
ATOM 8 O4' A A 501 30.299 155.896 60.030 1.00 74.67 O
ATOM 9 C3' A A 501 32.358 156.001 61.217 1.00 77.13 C
ATOM 10 O3' A A 501 33.347 155.322 60.488 1.00 83.47 O
ATOM 11 C2' A A 501 32.065 157.357 60.600 1.00 77.43 C
ATOM 12 O2' A A 501 33.210 157.935 60.006 1.00 78.17 O
ATOM 13 C1' A A 501 30.997 157.030 59.555 1.00 75.92 C
ATOM 14 N9 A A 501 30.039 158.137 59.487 1.00 76.69 N
ATOM 15 C8 A A 501 29.063 158.437 60.414 1.00 76.31 C
ATOM 16 N7 A A 501 28.386 159.525 60.141 1.00 75.74 N
ATOM 17 C5 A A 501 28.938 159.968 58.948 1.00 75.88 C
ATOM 18 C6 A A 501 28.665 161.086 58.146 1.00 75.43 C
ATOM 19 N6 A A 501 27.741 161.998 58.446 1.00 74.78 N
ATOM 20 N1 A A 501 29.388 161.240 57.015 1.00 75.61 N
ATOM 21 C2 A A 501 30.327 160.327 56.726 1.00 76.29 C
ATOM 22 N3 A A 501 30.684 159.237 57.408 1.00 76.42 N
ATOM 23 C4 A A 501 29.945 159.113 58.522 1.00 76.49 C
ATOM 24 P G A 502 34.656 154.793 61.253 1.00 89.38 P
ATOM 25 OP1 G A 502 34.317 154.569 62.695 1.00 86.81 O
ATOM 26 OP2 G A 502 35.784 155.703 60.900 1.00 88.89 O
ATOM 27 O5' G A 502 34.925 153.375 60.574 1.00 90.86 O
TER
ATOM 1 O3' G B 475 26.196 163.966 55.835 1.00 60.99 O
ATOM 2 P U B 476 26.841 165.341 56.354 1.00 61.27 P
ATOM 3 OP1 U B 476 27.249 166.145 55.171 1.00 59.36 O
ATOM 4 OP2 U B 476 27.850 165.012 57.399 1.00 61.58 O
ATOM 5 O5' U B 476 25.611 166.038 57.084 1.00 60.78 O
ATOM 6 C5' U B 476 24.429 166.388 56.353 1.00 62.86 C
ATOM 7 C4' U B 476 23.245 166.478 57.281 1.00 65.40 C
ATOM 8 O4' U B 476 22.991 165.170 57.835 1.00 67.03 O
ATOM 9 C3' U B 476 23.411 167.344 58.520 1.00 66.68 C
ATOM 10 O3' U B 476 23.187 168.719 58.215 1.00 69.94 O
ATOM 11 C2' U B 476 22.311 166.805 59.432 1.00 66.93 C
ATOM 12 O2' U B 476 21.040 167.335 59.134 1.00 67.11 O
ATOM 13 C1' U B 476 22.292 165.321 59.057 1.00 68.37 C
ATOM 14 N1 U B 476 22.852 164.390 60.051 1.00 71.02 N
ATOM 15 C2 U B 476 22.053 164.044 61.135 1.00 70.93 C
ATOM 16 O2 U B 476 20.948 164.521 61.325 1.00 70.67 O
ATOM 17 N3 U B 476 22.608 163.126 61.992 1.00 71.59 N
ATOM 18 C4 U B 476 23.859 162.543 61.894 1.00 72.14 C
ATOM 19 O4 U B 476 24.215 161.727 62.746 1.00 73.13 O
ATOM 20 C5 U B 476 24.634 162.972 60.770 1.00 72.12 C
ATOM 21 C6 U B 476 24.120 163.857 59.909 1.00 72.04 C
ATOM 22 P A B 477 24.289 169.833 58.607 1.00 72.94 P
ATOM 23 OP1 A B 477 25.483 169.656 57.738 1.00 73.93 O
ATOM 24 OP2 A B 477 24.456 169.857 60.084 1.00 73.09 O
ATOM 25 O5' A B 477 23.598 171.206 58.181 1.00 74.36 O
TER
ATOM 2 P A A 501 29.022 157.152 63.816 1.00 66.77 P
ATOM 3 OP1 A A 501 28.628 156.096 64.795 1.00 63.94 O
ATOM 4 OP2 A A 501 29.367 158.515 64.300 1.00 67.96 O
ATOM 5 O5' A A 501 30.241 156.611 62.949 1.00 66.15 O
ATOM 6 C5' A A 501 30.204 155.305 62.370 1.00 69.79 C
ATOM 7 C4' A A 501 31.030 155.276 61.117 1.00 73.85 C
ATOM 8 O4' A A 501 30.299 155.896 60.030 1.00 74.67 O
ATOM 9 C3' A A 501 32.358 156.001 61.217 1.00 77.13 C
ATOM 10 O3' A A 501 33.347 155.322 60.488 1.00 83.47 O
ATOM 11 C2' A A 501 32.065 157.357 60.600 1.00 77.43 C
ATOM 12 O2' A A 501 33.210 157.935 60.006 1.00 78.17 O
ATOM 13 C1' A A 501 30.997 157.030 59.555 1.00 75.92 C
ATOM 14 N9 A A 501 30.039 158.137 59.487 1.00 76.69 N
ATOM 15 C8 A A 501 29.063 158.437 60.414 1.00 76.31 C
ATOM 16 N7 A A 501 28.386 159.525 60.141 1.00 75.74 N
ATOM 17 C5 A A 501 28.938 159.968 58.948 1.00 75.88 C
ATOM 18 C6 A A 501 28.665 161.086 58.146 1.00 75.43 C
ATOM 19 N6 A A 501 27.741 161.998 58.446 1.00 74.78 N
ATOM 20 N1 A A 501 29.388 161.240 57.015 1.00 75.61 N
ATOM 21 C2 A A 501 30.327 160.327 56.726 1.00 76.29 C
ATOM 22 N3 A A 501 30.684 159.237 57.408 1.00 76.42 N
ATOM 23 C4 A A 501 29.945 159.113 58.522 1.00 76.49 C
ATOM 24 P G A 502 34.656 154.793 61.253 1.00 89.38 P
ATOM 25 OP1 G A 502 34.317 154.569 62.695 1.00 86.81 O
ATOM 26 OP2 G A 502 35.784 155.703 60.900 1.00 88.89 O
ATOM 27 O5' G A 502 34.925 153.375 60.574 1.00 90.86 O
TER
ATOM 1 O3' G B 475 26.196 163.966 55.835 1.00 60.99 O
ATOM 2 P U B 476 26.841 165.341 56.354 1.00 61.27 P
ATOM 3 OP1 U B 476 27.249 166.145 55.171 1.00 59.36 O
ATOM 4 OP2 U B 476 27.850 165.012 57.399 1.00 61.58 O
ATOM 5 O5' U B 476 25.611 166.038 57.084 1.00 60.78 O
ATOM 6 C5' U B 476 24.429 166.388 56.353 1.00 62.86 C
ATOM 7 C4' U B 476 23.245 166.478 57.281 1.00 65.40 C
ATOM 8 O4' U B 476 22.991 165.170 57.835 1.00 67.03 O
ATOM 9 C3' U B 476 23.411 167.344 58.520 1.00 66.68 C
ATOM 10 O3' U B 476 23.187 168.719 58.215 1.00 69.94 O
ATOM 11 C2' U B 476 22.311 166.805 59.432 1.00 66.93 C
ATOM 12 O2' U B 476 21.040 167.335 59.134 1.00 67.11 O
ATOM 13 C1' U B 476 22.292 165.321 59.057 1.00 68.37 C
ATOM 14 N1 U B 476 22.852 164.390 60.051 1.00 71.02 N
ATOM 15 C2 U B 476 22.053 164.044 61.135 1.00 70.93 C
ATOM 16 O2 U B 476 20.948 164.521 61.325 1.00 70.67 O
ATOM 17 N3 U B 476 22.608 163.126 61.992 1.00 71.59 N
ATOM 18 C4 U B 476 23.859 162.543 61.894 1.00 72.14 C
ATOM 19 O4 U B 476 24.215 161.727 62.746 1.00 73.13 O
ATOM 20 C5 U B 476 24.634 162.972 60.770 1.00 72.12 C
ATOM 21 C6 U B 476 24.120 163.857 59.909 1.00 72.04 C
ATOM 22 P A B 477 24.289 169.833 58.607 1.00 72.94 P
ATOM 23 OP1 A B 477 25.483 169.656 57.738 1.00 73.93 O
ATOM 24 OP2 A B 477 24.456 169.857 60.084 1.00 73.09 O
ATOM 25 O5' A B 477 23.598 171.206 58.181 1.00 74.36 O
TER
Atoms:
OP1: (28.628,156.096,64.795)
OP2: (29.367,158.515,64.300)
C3': (32.358,156.001,61.217)
C1': (30.997,157.030,59.555)
C5': (30.204,155.305,62.370)
O4': (30.299,155.896,60.030)
C8: (29.063,158.437,60.414)
O2': (33.210,157.935,60.006)
C6: (28.665,161.086,58.146)
C5: (28.938,159.968,58.948)
C4: (29.945,159.113,58.522)
P: (29.022,157.152,63.816)
C4': (31.030,155.276,61.117)
C2': (32.065,157.357,60.600)
C2: (30.327,160.327,56.726)
N1: (29.388,161.240,57.015)
N3: (30.684,159.237,57.408)
N6: (27.741,161.998,58.446)
N7: (28.386,159.525,60.141)
N9: (30.039,158.137,59.487)
O5': (30.241,156.611,62.949)
O3': (33.347,155.322,60.488)
OP2: (29.367,158.515,64.300)
C3': (32.358,156.001,61.217)
C1': (30.997,157.030,59.555)
C5': (30.204,155.305,62.370)
O4': (30.299,155.896,60.030)
C8: (29.063,158.437,60.414)
O2': (33.210,157.935,60.006)
C6: (28.665,161.086,58.146)
C5: (28.938,159.968,58.948)
C4: (29.945,159.113,58.522)
P: (29.022,157.152,63.816)
C4': (31.030,155.276,61.117)
C2': (32.065,157.357,60.600)
C2: (30.327,160.327,56.726)
N1: (29.388,161.240,57.015)
N3: (30.684,159.237,57.408)
N6: (27.741,161.998,58.446)
N7: (28.386,159.525,60.141)
N9: (30.039,158.137,59.487)
O5': (30.241,156.611,62.949)
O3': (33.347,155.322,60.488)
C4: (23.859,162.543,61.894)
N3: (22.608,163.126,61.992)
OP1: (27.249,166.145,55.171)
OP2: (27.850,165.012,57.399)
C2: (22.053,164.044,61.135)
C1': (22.292,165.321,59.057)
C3': (23.411,167.344,58.520)
O5': (25.611,166.038,57.084)
O4': (22.991,165.170,57.835)
C5': (24.429,166.388,56.353)
P: (26.841,165.341,56.354)
C4': (23.245,166.478,57.281)
C2': (22.311,166.805,59.432)
O2': (21.040,167.335,59.134)
N1: (22.852,164.390,60.051)
O4: (24.215,161.727,62.746)
O2: (20.948,164.521,61.325)
C6: (24.120,163.857,59.909)
C5: (24.634,162.972,60.770)
O3': (23.187,168.719,58.215)
N3: (22.608,163.126,61.992)
OP1: (27.249,166.145,55.171)
OP2: (27.850,165.012,57.399)
C2: (22.053,164.044,61.135)
C1': (22.292,165.321,59.057)
C3': (23.411,167.344,58.520)
O5': (25.611,166.038,57.084)
O4': (22.991,165.170,57.835)
C5': (24.429,166.388,56.353)
P: (26.841,165.341,56.354)
C4': (23.245,166.478,57.281)
C2': (22.311,166.805,59.432)
O2': (21.040,167.335,59.134)
N1: (22.852,164.390,60.051)
O4: (24.215,161.727,62.746)
O2: (20.948,164.521,61.325)
C6: (24.120,163.857,59.909)
C5: (24.634,162.972,60.770)
O3': (23.187,168.719,58.215)
Image (generated by PyMOL):