ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02653:0521

Extra

PDB:
ATOM 1 O3' A A2652 25.764 138.121 125.395 1.00 51.33 O
ATOM 2 P A A2653 25.327 137.183 124.160 1.00 53.00 P
ATOM 3 OP1 A A2653 24.731 135.964 124.755 1.00 51.70 O
ATOM 4 OP2 A A2653 26.456 137.055 123.207 1.00 53.59 O
ATOM 5 O5' A A2653 24.165 137.987 123.428 1.00 52.75 O
ATOM 6 C5' A A2653 22.975 138.360 124.141 1.00 53.49 C
ATOM 7 C4' A A2653 21.744 137.971 123.357 1.00 52.68 C
ATOM 8 O4' A A2653 21.669 138.779 122.154 1.00 52.35 O
ATOM 9 C3' A A2653 21.652 136.516 122.904 1.00 52.01 C
ATOM 10 O3' A A2653 20.299 136.088 122.934 1.00 50.22 O
ATOM 11 C2' A A2653 22.119 136.583 121.455 1.00 52.66 C
ATOM 12 O2' A A2653 21.571 135.538 120.671 1.00 53.12 O
ATOM 13 C1' A A2653 21.563 137.938 121.024 1.00 51.71 C
ATOM 14 N9 A A2653 22.275 138.574 119.917 1.00 49.95 N
ATOM 15 C8 A A2653 23.575 139.001 119.871 1.00 50.17 C
ATOM 16 N7 A A2653 23.910 139.551 118.730 1.00 49.85 N
ATOM 17 C5 A A2653 22.753 139.476 117.972 1.00 49.53 C
ATOM 18 C6 A A2653 22.451 139.881 116.657 1.00 49.36 C
ATOM 19 N6 A A2653 23.323 140.461 115.839 1.00 47.35 N
ATOM 20 N1 A A2653 21.201 139.657 116.204 1.00 50.63 N
ATOM 21 C2 A A2653 20.321 139.062 117.022 1.00 52.13 C
ATOM 22 N3 A A2653 20.486 138.634 118.272 1.00 51.28 N
ATOM 23 C4 A A2653 21.739 138.875 118.692 1.00 49.92 C
ATOM 24 P G A2654 19.756 135.269 124.200 1.00 50.45 P
ATOM 25 OP1 G A2654 20.771 134.269 124.625 1.00 49.80 O
ATOM 26 OP2 G A2654 18.392 134.814 123.851 1.00 50.74 O
ATOM 27 O5' G A2654 19.650 136.381 125.337 1.00 48.77 O
TER

ATOM 1 O3' A B 520 24.843 141.096 111.177 1.00 42.97 O
ATOM 2 P U B 521 23.808 140.655 112.307 1.00 42.57 P
ATOM 3 OP1 U B 521 22.504 140.380 111.667 1.00 43.08 O
ATOM 4 OP2 U B 521 23.901 141.681 113.362 1.00 44.29 O
ATOM 5 O5' U B 521 24.410 139.290 112.855 1.00 39.86 O
ATOM 6 C5' U B 521 24.676 138.209 111.959 1.00 39.76 C
ATOM 7 C4' U B 521 24.282 136.903 112.592 1.00 41.01 C
ATOM 8 O4' U B 521 25.186 136.626 113.689 1.00 43.85 O
ATOM 9 C3' U B 521 22.875 136.842 113.174 1.00 40.65 C
ATOM 10 O3' U B 521 22.385 135.515 113.069 1.00 41.32 O
ATOM 11 C2' U B 521 23.114 137.158 114.645 1.00 41.71 C
ATOM 12 O2' U B 521 22.125 136.612 115.487 1.00 39.84 O
ATOM 13 C1' U B 521 24.446 136.455 114.882 1.00 43.14 C
ATOM 14 N1 U B 521 25.232 137.003 115.997 1.00 43.99 N
ATOM 15 C2 U B 521 25.211 136.321 117.201 1.00 44.89 C
ATOM 16 O2 U B 521 24.568 135.293 117.377 1.00 46.21 O
ATOM 17 N3 U B 521 25.974 136.883 118.193 1.00 44.58 N
ATOM 18 C4 U B 521 26.739 138.026 118.102 1.00 45.56 C
ATOM 19 O4 U B 521 27.387 138.403 119.078 1.00 47.18 O
ATOM 20 C5 U B 521 26.704 138.668 116.830 1.00 45.57 C
ATOM 21 C6 U B 521 25.970 138.152 115.847 1.00 44.54 C
ATOM 22 P C B 522 21.679 135.038 111.716 1.00 44.15 P
ATOM 23 OP1 C B 522 21.108 136.246 111.067 1.00 46.25 O
ATOM 24 OP2 C B 522 20.811 133.856 111.975 1.00 42.56 O
ATOM 25 O5' C B 522 22.900 134.577 110.816 1.00 44.53 O
TER

Atoms:
OP1: (24.731,135.964,124.755)
OP2: (26.456,137.055,123.207)
C3': (21.652,136.516,122.904)
C1': (21.563,137.938,121.024)
C5': (22.975,138.360,124.141)
O4': (21.669,138.779,122.154)
C8: (23.575,139.001,119.871)
O2': (21.571,135.538,120.671)
C6: (22.451,139.881,116.657)
C5: (22.753,139.476,117.972)
C4: (21.739,138.875,118.692)
P: (25.327,137.183,124.160)
C4': (21.744,137.971,123.357)
C2': (22.119,136.583,121.455)
C2: (20.321,139.062,117.022)
N1: (21.201,139.657,116.204)
N3: (20.486,138.634,118.272)
N6: (23.323,140.461,115.839)
N7: (23.910,139.551,118.730)
N9: (22.275,138.574,119.917)
O5': (24.165,137.987,123.428)
O3': (20.299,136.088,122.934)
C4: (26.739,138.026,118.102)
N3: (25.974,136.883,118.193)
OP1: (22.504,140.380,111.667)
OP2: (23.901,141.681,113.362)
C2: (25.211,136.321,117.201)
C1': (24.446,136.455,114.882)
C3': (22.875,136.842,113.174)
O5': (24.410,139.290,112.855)
O4': (25.186,136.626,113.689)
C5': (24.676,138.209,111.959)
P: (23.808,140.655,112.307)
C4': (24.282,136.903,112.592)
C2': (23.114,137.158,114.645)
O2': (22.125,136.612,115.487)
N1: (25.232,137.003,115.997)
O4: (27.387,138.403,119.078)
O2: (24.568,135.293,117.377)
C6: (25.970,138.152,115.847)
C5: (26.704,138.668,116.830)
O3': (22.385,135.515,113.069)
Image (generated by PyMOL):
PyMOL image
show in jmol