Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0501:0476
Extra
PDB:
ATOM 1 O3' G A 500 27.716 157.202 62.513 1.00 58.67 O
ATOM 2 P A A 501 28.883 156.944 63.585 1.00 58.29 P
ATOM 3 OP1 A A 501 28.433 155.905 64.557 1.00 56.70 O
ATOM 4 OP2 A A 501 29.312 158.280 64.072 1.00 57.87 O
ATOM 5 O5' A A 501 30.061 156.338 62.707 1.00 57.20 O
ATOM 6 C5' A A 501 29.942 155.034 62.128 1.00 60.74 C
ATOM 7 C4' A A 501 30.681 154.980 60.820 1.00 63.87 C
ATOM 8 O4' A A 501 29.913 155.671 59.804 1.00 65.51 O
ATOM 9 C3' A A 501 32.056 155.623 60.838 1.00 66.84 C
ATOM 10 O3' A A 501 32.976 154.873 60.077 1.00 71.07 O
ATOM 11 C2' A A 501 31.804 157.006 60.254 1.00 67.54 C
ATOM 12 O2' A A 501 32.922 157.546 59.580 1.00 69.03 O
ATOM 13 C1' A A 501 30.654 156.755 59.281 1.00 67.15 C
ATOM 14 N9 A A 501 29.770 157.922 59.250 1.00 68.83 N
ATOM 15 C8 A A 501 28.926 158.340 60.255 1.00 69.48 C
ATOM 16 N7 A A 501 28.287 159.453 59.989 1.00 68.87 N
ATOM 17 C5 A A 501 28.727 159.789 58.719 1.00 68.99 C
ATOM 18 C6 A A 501 28.429 160.868 57.883 1.00 68.24 C
ATOM 19 N6 A A 501 27.591 161.847 58.223 1.00 67.85 N
ATOM 20 N1 A A 501 29.029 160.912 56.673 1.00 68.34 N
ATOM 21 C2 A A 501 29.875 159.926 56.342 1.00 68.71 C
ATOM 22 N3 A A 501 30.240 158.858 57.046 1.00 68.61 N
ATOM 23 C4 A A 501 29.628 158.847 58.241 1.00 69.22 C
ATOM 24 P G A 502 34.336 154.369 60.772 1.00 76.06 P
ATOM 25 OP1 G A 502 34.091 154.226 62.240 1.00 73.04 O
ATOM 26 OP2 G A 502 35.443 155.246 60.299 1.00 76.26 O
ATOM 27 O5' G A 502 34.572 152.918 60.153 1.00 78.93 O
TER
ATOM 1 O3' G B 475 25.896 163.808 55.552 1.00 50.82 O
ATOM 2 P U B 476 26.548 165.176 56.078 1.00 49.22 P
ATOM 3 OP1 U B 476 26.953 165.978 54.896 1.00 49.02 O
ATOM 4 OP2 U B 476 27.557 164.851 57.110 1.00 49.50 O
ATOM 5 O5' U B 476 25.330 165.881 56.818 1.00 48.50 O
ATOM 6 C5' U B 476 24.175 166.308 56.087 1.00 50.94 C
ATOM 7 C4' U B 476 22.984 166.403 57.006 1.00 53.38 C
ATOM 8 O4' U B 476 22.676 165.085 57.512 1.00 54.98 O
ATOM 9 C3' U B 476 23.174 167.236 58.262 1.00 54.44 C
ATOM 10 O3' U B 476 22.960 168.620 57.984 1.00 56.23 O
ATOM 11 C2' U B 476 22.084 166.686 59.179 1.00 54.80 C
ATOM 12 O2' U B 476 20.816 167.243 58.917 1.00 55.49 O
ATOM 13 C1' U B 476 22.043 165.209 58.771 1.00 56.08 C
ATOM 14 N1 U B 476 22.630 164.236 59.709 1.00 58.47 N
ATOM 15 C2 U B 476 21.955 163.991 60.901 1.00 59.19 C
ATOM 16 O2 U B 476 20.939 164.580 61.228 1.00 60.32 O
ATOM 17 N3 U B 476 22.522 163.034 61.701 1.00 59.30 N
ATOM 18 C4 U B 476 23.671 162.323 61.453 1.00 60.00 C
ATOM 19 O4 U B 476 24.038 161.470 62.261 1.00 61.98 O
ATOM 20 C5 U B 476 24.324 162.648 60.223 1.00 59.63 C
ATOM 21 C6 U B 476 23.798 163.568 59.415 1.00 58.53 C
ATOM 22 P A B 477 24.117 169.700 58.288 1.00 58.99 P
ATOM 23 OP1 A B 477 25.241 169.466 57.345 1.00 58.48 O
ATOM 24 OP2 A B 477 24.379 169.720 59.750 1.00 57.36 O
ATOM 25 O5' A B 477 23.444 171.089 57.886 1.00 60.51 O
TER
ATOM 2 P A A 501 28.883 156.944 63.585 1.00 58.29 P
ATOM 3 OP1 A A 501 28.433 155.905 64.557 1.00 56.70 O
ATOM 4 OP2 A A 501 29.312 158.280 64.072 1.00 57.87 O
ATOM 5 O5' A A 501 30.061 156.338 62.707 1.00 57.20 O
ATOM 6 C5' A A 501 29.942 155.034 62.128 1.00 60.74 C
ATOM 7 C4' A A 501 30.681 154.980 60.820 1.00 63.87 C
ATOM 8 O4' A A 501 29.913 155.671 59.804 1.00 65.51 O
ATOM 9 C3' A A 501 32.056 155.623 60.838 1.00 66.84 C
ATOM 10 O3' A A 501 32.976 154.873 60.077 1.00 71.07 O
ATOM 11 C2' A A 501 31.804 157.006 60.254 1.00 67.54 C
ATOM 12 O2' A A 501 32.922 157.546 59.580 1.00 69.03 O
ATOM 13 C1' A A 501 30.654 156.755 59.281 1.00 67.15 C
ATOM 14 N9 A A 501 29.770 157.922 59.250 1.00 68.83 N
ATOM 15 C8 A A 501 28.926 158.340 60.255 1.00 69.48 C
ATOM 16 N7 A A 501 28.287 159.453 59.989 1.00 68.87 N
ATOM 17 C5 A A 501 28.727 159.789 58.719 1.00 68.99 C
ATOM 18 C6 A A 501 28.429 160.868 57.883 1.00 68.24 C
ATOM 19 N6 A A 501 27.591 161.847 58.223 1.00 67.85 N
ATOM 20 N1 A A 501 29.029 160.912 56.673 1.00 68.34 N
ATOM 21 C2 A A 501 29.875 159.926 56.342 1.00 68.71 C
ATOM 22 N3 A A 501 30.240 158.858 57.046 1.00 68.61 N
ATOM 23 C4 A A 501 29.628 158.847 58.241 1.00 69.22 C
ATOM 24 P G A 502 34.336 154.369 60.772 1.00 76.06 P
ATOM 25 OP1 G A 502 34.091 154.226 62.240 1.00 73.04 O
ATOM 26 OP2 G A 502 35.443 155.246 60.299 1.00 76.26 O
ATOM 27 O5' G A 502 34.572 152.918 60.153 1.00 78.93 O
TER
ATOM 1 O3' G B 475 25.896 163.808 55.552 1.00 50.82 O
ATOM 2 P U B 476 26.548 165.176 56.078 1.00 49.22 P
ATOM 3 OP1 U B 476 26.953 165.978 54.896 1.00 49.02 O
ATOM 4 OP2 U B 476 27.557 164.851 57.110 1.00 49.50 O
ATOM 5 O5' U B 476 25.330 165.881 56.818 1.00 48.50 O
ATOM 6 C5' U B 476 24.175 166.308 56.087 1.00 50.94 C
ATOM 7 C4' U B 476 22.984 166.403 57.006 1.00 53.38 C
ATOM 8 O4' U B 476 22.676 165.085 57.512 1.00 54.98 O
ATOM 9 C3' U B 476 23.174 167.236 58.262 1.00 54.44 C
ATOM 10 O3' U B 476 22.960 168.620 57.984 1.00 56.23 O
ATOM 11 C2' U B 476 22.084 166.686 59.179 1.00 54.80 C
ATOM 12 O2' U B 476 20.816 167.243 58.917 1.00 55.49 O
ATOM 13 C1' U B 476 22.043 165.209 58.771 1.00 56.08 C
ATOM 14 N1 U B 476 22.630 164.236 59.709 1.00 58.47 N
ATOM 15 C2 U B 476 21.955 163.991 60.901 1.00 59.19 C
ATOM 16 O2 U B 476 20.939 164.580 61.228 1.00 60.32 O
ATOM 17 N3 U B 476 22.522 163.034 61.701 1.00 59.30 N
ATOM 18 C4 U B 476 23.671 162.323 61.453 1.00 60.00 C
ATOM 19 O4 U B 476 24.038 161.470 62.261 1.00 61.98 O
ATOM 20 C5 U B 476 24.324 162.648 60.223 1.00 59.63 C
ATOM 21 C6 U B 476 23.798 163.568 59.415 1.00 58.53 C
ATOM 22 P A B 477 24.117 169.700 58.288 1.00 58.99 P
ATOM 23 OP1 A B 477 25.241 169.466 57.345 1.00 58.48 O
ATOM 24 OP2 A B 477 24.379 169.720 59.750 1.00 57.36 O
ATOM 25 O5' A B 477 23.444 171.089 57.886 1.00 60.51 O
TER
Atoms:
OP1: (28.433,155.905,64.557)
OP2: (29.312,158.280,64.072)
C3': (32.056,155.623,60.838)
C1': (30.654,156.755,59.281)
C5': (29.942,155.034,62.128)
O4': (29.913,155.671,59.804)
C8: (28.926,158.340,60.255)
O2': (32.922,157.546,59.580)
C6: (28.429,160.868,57.883)
C5: (28.727,159.789,58.719)
C4: (29.628,158.847,58.241)
P: (28.883,156.944,63.585)
C4': (30.681,154.980,60.820)
C2': (31.804,157.006,60.254)
C2: (29.875,159.926,56.342)
N1: (29.029,160.912,56.673)
N3: (30.240,158.858,57.046)
N6: (27.591,161.847,58.223)
N7: (28.287,159.453,59.989)
N9: (29.770,157.922,59.250)
O5': (30.061,156.338,62.707)
O3': (32.976,154.873,60.077)
OP2: (29.312,158.280,64.072)
C3': (32.056,155.623,60.838)
C1': (30.654,156.755,59.281)
C5': (29.942,155.034,62.128)
O4': (29.913,155.671,59.804)
C8: (28.926,158.340,60.255)
O2': (32.922,157.546,59.580)
C6: (28.429,160.868,57.883)
C5: (28.727,159.789,58.719)
C4: (29.628,158.847,58.241)
P: (28.883,156.944,63.585)
C4': (30.681,154.980,60.820)
C2': (31.804,157.006,60.254)
C2: (29.875,159.926,56.342)
N1: (29.029,160.912,56.673)
N3: (30.240,158.858,57.046)
N6: (27.591,161.847,58.223)
N7: (28.287,159.453,59.989)
N9: (29.770,157.922,59.250)
O5': (30.061,156.338,62.707)
O3': (32.976,154.873,60.077)
C4: (23.671,162.323,61.453)
N3: (22.522,163.034,61.701)
OP1: (26.953,165.978,54.896)
OP2: (27.557,164.851,57.110)
C2: (21.955,163.991,60.901)
C1': (22.043,165.209,58.771)
C3': (23.174,167.236,58.262)
O5': (25.330,165.881,56.818)
O4': (22.676,165.085,57.512)
C5': (24.175,166.308,56.087)
P: (26.548,165.176,56.078)
C4': (22.984,166.403,57.006)
C2': (22.084,166.686,59.179)
O2': (20.816,167.243,58.917)
N1: (22.630,164.236,59.709)
O4: (24.038,161.470,62.261)
O2: (20.939,164.580,61.228)
C6: (23.798,163.568,59.415)
C5: (24.324,162.648,60.223)
O3': (22.960,168.620,57.984)
N3: (22.522,163.034,61.701)
OP1: (26.953,165.978,54.896)
OP2: (27.557,164.851,57.110)
C2: (21.955,163.991,60.901)
C1': (22.043,165.209,58.771)
C3': (23.174,167.236,58.262)
O5': (25.330,165.881,56.818)
O4': (22.676,165.085,57.512)
C5': (24.175,166.308,56.087)
P: (26.548,165.176,56.078)
C4': (22.984,166.403,57.006)
C2': (22.084,166.686,59.179)
O2': (20.816,167.243,58.917)
N1: (22.630,164.236,59.709)
O4: (24.038,161.470,62.261)
O2: (20.939,164.580,61.228)
C6: (23.798,163.568,59.415)
C5: (24.324,162.648,60.223)
O3': (22.960,168.620,57.984)
Image (generated by PyMOL):