Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0681:0720
Extra
PDB:
ATOM 1 O3' A A 680 65.279 74.416 45.605 1.00 50.09 O
ATOM 2 P A A 681 64.240 73.934 44.482 1.00 51.98 P
ATOM 3 OP1 A A 681 63.608 75.123 43.850 1.00 52.03 O
ATOM 4 OP2 A A 681 63.382 72.921 45.138 1.00 52.92 O
ATOM 5 O5' A A 681 65.175 73.236 43.396 1.00 50.68 O
ATOM 6 C5' A A 681 66.207 73.991 42.733 1.00 51.41 C
ATOM 7 C4' A A 681 67.197 73.072 42.059 1.00 50.67 C
ATOM 8 O4' A A 681 67.804 72.214 43.050 1.00 50.73 O
ATOM 9 C3' A A 681 66.624 72.117 41.030 1.00 50.76 C
ATOM 10 O3' A A 681 66.508 72.768 39.775 1.00 52.30 O
ATOM 11 C2' A A 681 67.662 71.005 41.013 1.00 51.45 C
ATOM 12 O2' A A 681 68.815 71.328 40.262 1.00 50.33 O
ATOM 13 C1' A A 681 68.040 70.935 42.492 1.00 52.27 C
ATOM 14 N9 A A 681 67.250 69.962 43.245 1.00 54.18 N
ATOM 15 C8 A A 681 66.077 70.174 43.924 1.00 55.05 C
ATOM 16 N7 A A 681 65.611 69.106 44.521 1.00 55.87 N
ATOM 17 C5 A A 681 66.537 68.121 44.211 1.00 56.25 C
ATOM 18 C6 A A 681 66.618 66.763 44.549 1.00 57.32 C
ATOM 19 N6 A A 681 65.720 66.137 45.310 1.00 58.36 N
ATOM 20 N1 A A 681 67.667 66.059 44.073 1.00 58.00 N
ATOM 21 C2 A A 681 68.570 66.691 43.311 1.00 57.50 C
ATOM 22 N3 A A 681 68.605 67.962 42.929 1.00 56.69 N
ATOM 23 C4 A A 681 67.549 68.632 43.420 1.00 55.65 C
ATOM 24 P A A 682 65.536 72.174 38.644 1.00 53.02 P
ATOM 25 OP1 A A 682 65.673 73.075 37.475 1.00 54.22 O
ATOM 26 OP2 A A 682 64.198 71.938 39.227 1.00 51.83 O
ATOM 27 O5' A A 682 66.202 70.777 38.263 1.00 53.91 O
TER
ATOM 1 O3' C B 719 64.048 64.469 47.507 1.00 50.50 O
ATOM 2 P U B 720 65.130 63.293 47.469 1.00 52.18 P
ATOM 3 OP1 U B 720 66.426 63.900 47.095 1.00 53.83 O
ATOM 4 OP2 U B 720 64.591 62.174 46.667 1.00 54.11 O
ATOM 5 O5' U B 720 65.228 62.835 48.985 1.00 54.58 O
ATOM 6 C5' U B 720 65.762 63.722 49.975 1.00 58.39 C
ATOM 7 C4' U B 720 65.668 63.100 51.343 1.00 60.60 C
ATOM 8 O4' U B 720 64.279 62.962 51.732 1.00 61.65 O
ATOM 9 C3' U B 720 66.210 61.690 51.463 1.00 61.47 C
ATOM 10 O3' U B 720 67.621 61.677 51.567 1.00 63.62 O
ATOM 11 C2' U B 720 65.528 61.202 52.731 1.00 62.25 C
ATOM 12 O2' U B 720 66.139 61.719 53.895 1.00 61.69 O
ATOM 13 C1' U B 720 64.141 61.828 52.575 1.00 62.80 C
ATOM 14 N1 U B 720 63.143 60.916 51.991 1.00 64.49 N
ATOM 15 C2 U B 720 62.261 60.304 52.858 1.00 65.66 C
ATOM 16 O2 U B 720 62.270 60.503 54.056 1.00 67.92 O
ATOM 17 N3 U B 720 61.360 59.456 52.270 1.00 66.21 N
ATOM 18 C4 U B 720 61.240 59.172 50.932 1.00 66.45 C
ATOM 19 O4 U B 720 60.344 58.413 50.553 1.00 67.01 O
ATOM 20 C5 U B 720 62.183 59.847 50.093 1.00 66.33 C
ATOM 21 C6 U B 720 63.081 60.673 50.638 1.00 65.24 C
ATOM 22 P U B 721 68.422 60.335 51.219 1.00 65.47 P
ATOM 23 OP1 U B 721 69.867 60.570 51.471 1.00 64.66 O
ATOM 24 OP2 U B 721 67.975 59.886 49.874 1.00 63.73 O
ATOM 25 O5' U B 721 67.885 59.304 52.308 1.00 71.20 O
TER
ATOM 2 P A A 681 64.240 73.934 44.482 1.00 51.98 P
ATOM 3 OP1 A A 681 63.608 75.123 43.850 1.00 52.03 O
ATOM 4 OP2 A A 681 63.382 72.921 45.138 1.00 52.92 O
ATOM 5 O5' A A 681 65.175 73.236 43.396 1.00 50.68 O
ATOM 6 C5' A A 681 66.207 73.991 42.733 1.00 51.41 C
ATOM 7 C4' A A 681 67.197 73.072 42.059 1.00 50.67 C
ATOM 8 O4' A A 681 67.804 72.214 43.050 1.00 50.73 O
ATOM 9 C3' A A 681 66.624 72.117 41.030 1.00 50.76 C
ATOM 10 O3' A A 681 66.508 72.768 39.775 1.00 52.30 O
ATOM 11 C2' A A 681 67.662 71.005 41.013 1.00 51.45 C
ATOM 12 O2' A A 681 68.815 71.328 40.262 1.00 50.33 O
ATOM 13 C1' A A 681 68.040 70.935 42.492 1.00 52.27 C
ATOM 14 N9 A A 681 67.250 69.962 43.245 1.00 54.18 N
ATOM 15 C8 A A 681 66.077 70.174 43.924 1.00 55.05 C
ATOM 16 N7 A A 681 65.611 69.106 44.521 1.00 55.87 N
ATOM 17 C5 A A 681 66.537 68.121 44.211 1.00 56.25 C
ATOM 18 C6 A A 681 66.618 66.763 44.549 1.00 57.32 C
ATOM 19 N6 A A 681 65.720 66.137 45.310 1.00 58.36 N
ATOM 20 N1 A A 681 67.667 66.059 44.073 1.00 58.00 N
ATOM 21 C2 A A 681 68.570 66.691 43.311 1.00 57.50 C
ATOM 22 N3 A A 681 68.605 67.962 42.929 1.00 56.69 N
ATOM 23 C4 A A 681 67.549 68.632 43.420 1.00 55.65 C
ATOM 24 P A A 682 65.536 72.174 38.644 1.00 53.02 P
ATOM 25 OP1 A A 682 65.673 73.075 37.475 1.00 54.22 O
ATOM 26 OP2 A A 682 64.198 71.938 39.227 1.00 51.83 O
ATOM 27 O5' A A 682 66.202 70.777 38.263 1.00 53.91 O
TER
ATOM 1 O3' C B 719 64.048 64.469 47.507 1.00 50.50 O
ATOM 2 P U B 720 65.130 63.293 47.469 1.00 52.18 P
ATOM 3 OP1 U B 720 66.426 63.900 47.095 1.00 53.83 O
ATOM 4 OP2 U B 720 64.591 62.174 46.667 1.00 54.11 O
ATOM 5 O5' U B 720 65.228 62.835 48.985 1.00 54.58 O
ATOM 6 C5' U B 720 65.762 63.722 49.975 1.00 58.39 C
ATOM 7 C4' U B 720 65.668 63.100 51.343 1.00 60.60 C
ATOM 8 O4' U B 720 64.279 62.962 51.732 1.00 61.65 O
ATOM 9 C3' U B 720 66.210 61.690 51.463 1.00 61.47 C
ATOM 10 O3' U B 720 67.621 61.677 51.567 1.00 63.62 O
ATOM 11 C2' U B 720 65.528 61.202 52.731 1.00 62.25 C
ATOM 12 O2' U B 720 66.139 61.719 53.895 1.00 61.69 O
ATOM 13 C1' U B 720 64.141 61.828 52.575 1.00 62.80 C
ATOM 14 N1 U B 720 63.143 60.916 51.991 1.00 64.49 N
ATOM 15 C2 U B 720 62.261 60.304 52.858 1.00 65.66 C
ATOM 16 O2 U B 720 62.270 60.503 54.056 1.00 67.92 O
ATOM 17 N3 U B 720 61.360 59.456 52.270 1.00 66.21 N
ATOM 18 C4 U B 720 61.240 59.172 50.932 1.00 66.45 C
ATOM 19 O4 U B 720 60.344 58.413 50.553 1.00 67.01 O
ATOM 20 C5 U B 720 62.183 59.847 50.093 1.00 66.33 C
ATOM 21 C6 U B 720 63.081 60.673 50.638 1.00 65.24 C
ATOM 22 P U B 721 68.422 60.335 51.219 1.00 65.47 P
ATOM 23 OP1 U B 721 69.867 60.570 51.471 1.00 64.66 O
ATOM 24 OP2 U B 721 67.975 59.886 49.874 1.00 63.73 O
ATOM 25 O5' U B 721 67.885 59.304 52.308 1.00 71.20 O
TER
Atoms:
OP1: (63.608,75.123,43.850)
OP2: (63.382,72.921,45.138)
C3': (66.624,72.117,41.030)
C1': (68.040,70.935,42.492)
C5': (66.207,73.991,42.733)
O4': (67.804,72.214,43.050)
C8: (66.077,70.174,43.924)
O2': (68.815,71.328,40.262)
C6: (66.618,66.763,44.549)
C5: (66.537,68.121,44.211)
C4: (67.549,68.632,43.420)
P: (64.240,73.934,44.482)
C4': (67.197,73.072,42.059)
C2': (67.662,71.005,41.013)
C2: (68.570,66.691,43.311)
N1: (67.667,66.059,44.073)
N3: (68.605,67.962,42.929)
N6: (65.720,66.137,45.310)
N7: (65.611,69.106,44.521)
N9: (67.250,69.962,43.245)
O5': (65.175,73.236,43.396)
O3': (66.508,72.768,39.775)
OP2: (63.382,72.921,45.138)
C3': (66.624,72.117,41.030)
C1': (68.040,70.935,42.492)
C5': (66.207,73.991,42.733)
O4': (67.804,72.214,43.050)
C8: (66.077,70.174,43.924)
O2': (68.815,71.328,40.262)
C6: (66.618,66.763,44.549)
C5: (66.537,68.121,44.211)
C4: (67.549,68.632,43.420)
P: (64.240,73.934,44.482)
C4': (67.197,73.072,42.059)
C2': (67.662,71.005,41.013)
C2: (68.570,66.691,43.311)
N1: (67.667,66.059,44.073)
N3: (68.605,67.962,42.929)
N6: (65.720,66.137,45.310)
N7: (65.611,69.106,44.521)
N9: (67.250,69.962,43.245)
O5': (65.175,73.236,43.396)
O3': (66.508,72.768,39.775)
C4: (61.240,59.172,50.932)
N3: (61.360,59.456,52.270)
OP1: (66.426,63.900,47.095)
OP2: (64.591,62.174,46.667)
C2: (62.261,60.304,52.858)
C1': (64.141,61.828,52.575)
C3': (66.210,61.690,51.463)
O5': (65.228,62.835,48.985)
O4': (64.279,62.962,51.732)
C5': (65.762,63.722,49.975)
P: (65.130,63.293,47.469)
C4': (65.668,63.100,51.343)
C2': (65.528,61.202,52.731)
O2': (66.139,61.719,53.895)
N1: (63.143,60.916,51.991)
O4: (60.344,58.413,50.553)
O2: (62.270,60.503,54.056)
C6: (63.081,60.673,50.638)
C5: (62.183,59.847,50.093)
O3': (67.621,61.677,51.567)
N3: (61.360,59.456,52.270)
OP1: (66.426,63.900,47.095)
OP2: (64.591,62.174,46.667)
C2: (62.261,60.304,52.858)
C1': (64.141,61.828,52.575)
C3': (66.210,61.690,51.463)
O5': (65.228,62.835,48.985)
O4': (64.279,62.962,51.732)
C5': (65.762,63.722,49.975)
P: (65.130,63.293,47.469)
C4': (65.668,63.100,51.343)
C2': (65.528,61.202,52.731)
O2': (66.139,61.719,53.895)
N1: (63.143,60.916,51.991)
O4: (60.344,58.413,50.553)
O2: (62.270,60.503,54.056)
C6: (63.081,60.673,50.638)
C5: (62.183,59.847,50.093)
O3': (67.621,61.677,51.567)
Image (generated by PyMOL):