Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02653:0521
Extra
PDB:
ATOM 1 O3' A A2652 25.589 137.887 125.400 1.00 44.90 O
ATOM 2 P A A2653 25.154 136.989 124.142 1.00 45.89 P
ATOM 3 OP1 A A2653 24.551 135.761 124.703 1.00 45.72 O
ATOM 4 OP2 A A2653 26.285 136.879 123.192 1.00 46.05 O
ATOM 5 O5' A A2653 23.996 137.826 123.449 1.00 46.15 O
ATOM 6 C5' A A2653 22.823 138.181 124.187 1.00 47.22 C
ATOM 7 C4' A A2653 21.587 137.797 123.415 1.00 47.89 C
ATOM 8 O4' A A2653 21.530 138.610 122.213 1.00 48.08 O
ATOM 9 C3' A A2653 21.503 136.339 122.960 1.00 47.59 C
ATOM 10 O3' A A2653 20.148 135.896 122.964 1.00 45.94 O
ATOM 11 C2' A A2653 22.002 136.414 121.518 1.00 49.27 C
ATOM 12 O2' A A2653 21.490 135.367 120.707 1.00 49.64 O
ATOM 13 C1' A A2653 21.453 137.773 121.080 1.00 48.94 C
ATOM 14 N9 A A2653 22.184 138.415 119.986 1.00 48.38 N
ATOM 15 C8 A A2653 23.500 138.799 119.934 1.00 47.89 C
ATOM 16 N7 A A2653 23.847 139.339 118.792 1.00 47.65 N
ATOM 17 C5 A A2653 22.681 139.311 118.042 1.00 48.84 C
ATOM 18 C6 A A2653 22.384 139.727 116.729 1.00 49.92 C
ATOM 19 N6 A A2653 23.277 140.260 115.896 1.00 49.12 N
ATOM 20 N1 A A2653 21.117 139.566 116.291 1.00 51.04 N
ATOM 21 C2 A A2653 20.222 139.010 117.115 1.00 51.57 C
ATOM 22 N3 A A2653 20.383 138.569 118.360 1.00 50.75 N
ATOM 23 C4 A A2653 21.649 138.751 118.768 1.00 49.01 C
ATOM 24 P G A2654 19.603 134.999 124.178 1.00 44.44 P
ATOM 25 OP1 G A2654 20.629 134.021 124.616 1.00 45.39 O
ATOM 26 OP2 G A2654 18.271 134.514 123.759 1.00 45.29 O
ATOM 27 O5' G A2654 19.418 136.049 125.358 1.00 44.98 O
TER
ATOM 1 O3' A B 520 24.779 140.926 111.249 1.00 35.60 O
ATOM 2 P U B 521 23.694 140.383 112.289 1.00 36.91 P
ATOM 3 OP1 U B 521 22.479 140.004 111.541 1.00 37.60 O
ATOM 4 OP2 U B 521 23.605 141.395 113.368 1.00 38.29 O
ATOM 5 O5' U B 521 24.359 139.062 112.876 1.00 35.04 O
ATOM 6 C5' U B 521 24.658 137.961 112.015 1.00 36.18 C
ATOM 7 C4' U B 521 24.216 136.666 112.648 1.00 39.08 C
ATOM 8 O4' U B 521 25.080 136.382 113.776 1.00 41.12 O
ATOM 9 C3' U B 521 22.784 136.622 113.184 1.00 38.98 C
ATOM 10 O3' U B 521 22.271 135.295 113.078 1.00 38.58 O
ATOM 11 C2' U B 521 22.977 136.955 114.659 1.00 39.74 C
ATOM 12 O2' U B 521 21.946 136.420 115.462 1.00 39.04 O
ATOM 13 C1' U B 521 24.302 136.252 114.950 1.00 40.75 C
ATOM 14 N1 U B 521 25.078 136.805 116.069 1.00 40.84 N
ATOM 15 C2 U B 521 25.038 136.137 117.278 1.00 41.95 C
ATOM 16 O2 U B 521 24.350 135.147 117.472 1.00 43.43 O
ATOM 17 N3 U B 521 25.834 136.673 118.259 1.00 42.67 N
ATOM 18 C4 U B 521 26.641 137.786 118.159 1.00 43.26 C
ATOM 19 O4 U B 521 27.363 138.098 119.105 1.00 45.36 O
ATOM 20 C5 U B 521 26.601 138.435 116.890 1.00 43.15 C
ATOM 21 C6 U B 521 25.839 137.937 115.914 1.00 41.67 C
ATOM 22 P C B 522 21.499 134.839 111.744 1.00 40.55 P
ATOM 23 OP1 C B 522 20.939 136.061 111.105 1.00 41.95 O
ATOM 24 OP2 C B 522 20.604 133.679 112.024 1.00 39.28 O
ATOM 25 O5' C B 522 22.670 134.331 110.802 1.00 39.42 O
TER
ATOM 2 P A A2653 25.154 136.989 124.142 1.00 45.89 P
ATOM 3 OP1 A A2653 24.551 135.761 124.703 1.00 45.72 O
ATOM 4 OP2 A A2653 26.285 136.879 123.192 1.00 46.05 O
ATOM 5 O5' A A2653 23.996 137.826 123.449 1.00 46.15 O
ATOM 6 C5' A A2653 22.823 138.181 124.187 1.00 47.22 C
ATOM 7 C4' A A2653 21.587 137.797 123.415 1.00 47.89 C
ATOM 8 O4' A A2653 21.530 138.610 122.213 1.00 48.08 O
ATOM 9 C3' A A2653 21.503 136.339 122.960 1.00 47.59 C
ATOM 10 O3' A A2653 20.148 135.896 122.964 1.00 45.94 O
ATOM 11 C2' A A2653 22.002 136.414 121.518 1.00 49.27 C
ATOM 12 O2' A A2653 21.490 135.367 120.707 1.00 49.64 O
ATOM 13 C1' A A2653 21.453 137.773 121.080 1.00 48.94 C
ATOM 14 N9 A A2653 22.184 138.415 119.986 1.00 48.38 N
ATOM 15 C8 A A2653 23.500 138.799 119.934 1.00 47.89 C
ATOM 16 N7 A A2653 23.847 139.339 118.792 1.00 47.65 N
ATOM 17 C5 A A2653 22.681 139.311 118.042 1.00 48.84 C
ATOM 18 C6 A A2653 22.384 139.727 116.729 1.00 49.92 C
ATOM 19 N6 A A2653 23.277 140.260 115.896 1.00 49.12 N
ATOM 20 N1 A A2653 21.117 139.566 116.291 1.00 51.04 N
ATOM 21 C2 A A2653 20.222 139.010 117.115 1.00 51.57 C
ATOM 22 N3 A A2653 20.383 138.569 118.360 1.00 50.75 N
ATOM 23 C4 A A2653 21.649 138.751 118.768 1.00 49.01 C
ATOM 24 P G A2654 19.603 134.999 124.178 1.00 44.44 P
ATOM 25 OP1 G A2654 20.629 134.021 124.616 1.00 45.39 O
ATOM 26 OP2 G A2654 18.271 134.514 123.759 1.00 45.29 O
ATOM 27 O5' G A2654 19.418 136.049 125.358 1.00 44.98 O
TER
ATOM 1 O3' A B 520 24.779 140.926 111.249 1.00 35.60 O
ATOM 2 P U B 521 23.694 140.383 112.289 1.00 36.91 P
ATOM 3 OP1 U B 521 22.479 140.004 111.541 1.00 37.60 O
ATOM 4 OP2 U B 521 23.605 141.395 113.368 1.00 38.29 O
ATOM 5 O5' U B 521 24.359 139.062 112.876 1.00 35.04 O
ATOM 6 C5' U B 521 24.658 137.961 112.015 1.00 36.18 C
ATOM 7 C4' U B 521 24.216 136.666 112.648 1.00 39.08 C
ATOM 8 O4' U B 521 25.080 136.382 113.776 1.00 41.12 O
ATOM 9 C3' U B 521 22.784 136.622 113.184 1.00 38.98 C
ATOM 10 O3' U B 521 22.271 135.295 113.078 1.00 38.58 O
ATOM 11 C2' U B 521 22.977 136.955 114.659 1.00 39.74 C
ATOM 12 O2' U B 521 21.946 136.420 115.462 1.00 39.04 O
ATOM 13 C1' U B 521 24.302 136.252 114.950 1.00 40.75 C
ATOM 14 N1 U B 521 25.078 136.805 116.069 1.00 40.84 N
ATOM 15 C2 U B 521 25.038 136.137 117.278 1.00 41.95 C
ATOM 16 O2 U B 521 24.350 135.147 117.472 1.00 43.43 O
ATOM 17 N3 U B 521 25.834 136.673 118.259 1.00 42.67 N
ATOM 18 C4 U B 521 26.641 137.786 118.159 1.00 43.26 C
ATOM 19 O4 U B 521 27.363 138.098 119.105 1.00 45.36 O
ATOM 20 C5 U B 521 26.601 138.435 116.890 1.00 43.15 C
ATOM 21 C6 U B 521 25.839 137.937 115.914 1.00 41.67 C
ATOM 22 P C B 522 21.499 134.839 111.744 1.00 40.55 P
ATOM 23 OP1 C B 522 20.939 136.061 111.105 1.00 41.95 O
ATOM 24 OP2 C B 522 20.604 133.679 112.024 1.00 39.28 O
ATOM 25 O5' C B 522 22.670 134.331 110.802 1.00 39.42 O
TER
Atoms:
OP1: (24.551,135.761,124.703)
OP2: (26.285,136.879,123.192)
C3': (21.503,136.339,122.960)
C1': (21.453,137.773,121.080)
C5': (22.823,138.181,124.187)
O4': (21.530,138.610,122.213)
C8: (23.500,138.799,119.934)
O2': (21.490,135.367,120.707)
C6: (22.384,139.727,116.729)
C5: (22.681,139.311,118.042)
C4: (21.649,138.751,118.768)
P: (25.154,136.989,124.142)
C4': (21.587,137.797,123.415)
C2': (22.002,136.414,121.518)
C2: (20.222,139.010,117.115)
N1: (21.117,139.566,116.291)
N3: (20.383,138.569,118.360)
N6: (23.277,140.260,115.896)
N7: (23.847,139.339,118.792)
N9: (22.184,138.415,119.986)
O5': (23.996,137.826,123.449)
O3': (20.148,135.896,122.964)
OP2: (26.285,136.879,123.192)
C3': (21.503,136.339,122.960)
C1': (21.453,137.773,121.080)
C5': (22.823,138.181,124.187)
O4': (21.530,138.610,122.213)
C8: (23.500,138.799,119.934)
O2': (21.490,135.367,120.707)
C6: (22.384,139.727,116.729)
C5: (22.681,139.311,118.042)
C4: (21.649,138.751,118.768)
P: (25.154,136.989,124.142)
C4': (21.587,137.797,123.415)
C2': (22.002,136.414,121.518)
C2: (20.222,139.010,117.115)
N1: (21.117,139.566,116.291)
N3: (20.383,138.569,118.360)
N6: (23.277,140.260,115.896)
N7: (23.847,139.339,118.792)
N9: (22.184,138.415,119.986)
O5': (23.996,137.826,123.449)
O3': (20.148,135.896,122.964)
C4: (26.641,137.786,118.159)
N3: (25.834,136.673,118.259)
OP1: (22.479,140.004,111.541)
OP2: (23.605,141.395,113.368)
C2: (25.038,136.137,117.278)
C1': (24.302,136.252,114.950)
C3': (22.784,136.622,113.184)
O5': (24.359,139.062,112.876)
O4': (25.080,136.382,113.776)
C5': (24.658,137.961,112.015)
P: (23.694,140.383,112.289)
C4': (24.216,136.666,112.648)
C2': (22.977,136.955,114.659)
O2': (21.946,136.420,115.462)
N1: (25.078,136.805,116.069)
O4: (27.363,138.098,119.105)
O2: (24.350,135.147,117.472)
C6: (25.839,137.937,115.914)
C5: (26.601,138.435,116.890)
O3': (22.271,135.295,113.078)
N3: (25.834,136.673,118.259)
OP1: (22.479,140.004,111.541)
OP2: (23.605,141.395,113.368)
C2: (25.038,136.137,117.278)
C1': (24.302,136.252,114.950)
C3': (22.784,136.622,113.184)
O5': (24.359,139.062,112.876)
O4': (25.080,136.382,113.776)
C5': (24.658,137.961,112.015)
P: (23.694,140.383,112.289)
C4': (24.216,136.666,112.648)
C2': (22.977,136.955,114.659)
O2': (21.946,136.420,115.462)
N1: (25.078,136.805,116.069)
O4: (27.363,138.098,119.105)
O2: (24.350,135.147,117.472)
C6: (25.839,137.937,115.914)
C5: (26.601,138.435,116.890)
O3': (22.271,135.295,113.078)
Image (generated by PyMOL):