Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0501:0476
Extra
PDB:
ATOM 1 O3' G A 500 27.683 156.892 62.431 1.00 49.88 O
ATOM 2 P A A 501 28.791 156.805 63.590 1.00 51.43 P
ATOM 3 OP1 A A 501 28.347 155.819 64.612 1.00 49.80 O
ATOM 4 OP2 A A 501 29.111 158.199 63.994 1.00 51.54 O
ATOM 5 O5' A A 501 30.065 156.215 62.841 1.00 51.65 O
ATOM 6 C5' A A 501 30.073 154.863 62.379 1.00 54.66 C
ATOM 7 C4' A A 501 30.758 154.771 61.042 1.00 57.55 C
ATOM 8 O4' A A 501 29.918 155.381 60.029 1.00 57.88 O
ATOM 9 C3' A A 501 32.116 155.445 60.953 1.00 60.01 C
ATOM 10 O3' A A 501 33.013 154.668 60.184 1.00 64.49 O
ATOM 11 C2' A A 501 31.803 156.771 60.276 1.00 60.15 C
ATOM 12 O2' A A 501 32.876 157.260 59.500 1.00 61.99 O
ATOM 13 C1' A A 501 30.617 156.423 59.381 1.00 58.79 C
ATOM 14 N9 A A 501 29.720 157.577 59.305 1.00 59.90 N
ATOM 15 C8 A A 501 28.892 158.035 60.303 1.00 60.40 C
ATOM 16 N7 A A 501 28.238 159.128 59.995 1.00 60.53 N
ATOM 17 C5 A A 501 28.651 159.405 58.702 1.00 61.66 C
ATOM 18 C6 A A 501 28.328 160.445 57.816 1.00 62.30 C
ATOM 19 N6 A A 501 27.485 161.434 58.121 1.00 62.07 N
ATOM 20 N1 A A 501 28.911 160.435 56.595 1.00 62.50 N
ATOM 21 C2 A A 501 29.762 159.439 56.300 1.00 62.32 C
ATOM 22 N3 A A 501 30.147 158.406 57.052 1.00 61.86 N
ATOM 23 C4 A A 501 29.552 158.448 58.255 1.00 61.42 C
ATOM 24 P G A 502 34.415 154.215 60.831 1.00 69.24 P
ATOM 25 OP1 G A 502 34.258 154.095 62.314 1.00 66.69 O
ATOM 26 OP2 G A 502 35.471 155.105 60.276 1.00 68.62 O
ATOM 27 O5' G A 502 34.650 152.746 60.254 1.00 72.37 O
TER
ATOM 1 O3' G B 475 25.843 163.481 55.568 1.00 44.30 O
ATOM 2 P U B 476 26.478 164.854 56.092 1.00 42.40 P
ATOM 3 OP1 U B 476 26.903 165.658 54.922 1.00 42.41 O
ATOM 4 OP2 U B 476 27.471 164.516 57.142 1.00 43.45 O
ATOM 5 O5' U B 476 25.246 165.566 56.802 1.00 41.81 O
ATOM 6 C5' U B 476 24.105 165.998 56.046 1.00 43.02 C
ATOM 7 C4' U B 476 22.910 166.137 56.952 1.00 44.87 C
ATOM 8 O4' U B 476 22.609 164.844 57.514 1.00 46.56 O
ATOM 9 C3' U B 476 23.117 166.996 58.188 1.00 46.94 C
ATOM 10 O3' U B 476 22.932 168.371 57.865 1.00 49.79 O
ATOM 11 C2' U B 476 22.013 166.501 59.118 1.00 46.74 C
ATOM 12 O2' U B 476 20.761 167.092 58.862 1.00 46.18 O
ATOM 13 C1' U B 476 21.920 165.021 58.737 1.00 47.50 C
ATOM 14 N1 U B 476 22.430 164.058 59.730 1.00 50.15 N
ATOM 15 C2 U B 476 21.777 163.987 60.953 1.00 50.89 C
ATOM 16 O2 U B 476 20.830 164.699 61.244 1.00 51.63 O
ATOM 17 N3 U B 476 22.277 163.051 61.822 1.00 50.62 N
ATOM 18 C4 U B 476 23.337 162.201 61.606 1.00 50.11 C
ATOM 19 O4 U B 476 23.659 161.407 62.486 1.00 51.44 O
ATOM 20 C5 U B 476 23.967 162.338 60.331 1.00 50.04 C
ATOM 21 C6 U B 476 23.508 163.238 59.460 1.00 50.54 C
ATOM 22 P A B 477 23.962 169.479 58.409 1.00 51.13 P
ATOM 23 OP1 A B 477 25.236 169.359 57.651 1.00 50.80 O
ATOM 24 OP2 A B 477 23.984 169.410 59.893 1.00 51.23 O
ATOM 25 O5' A B 477 23.266 170.847 57.974 1.00 52.95 O
TER
ATOM 2 P A A 501 28.791 156.805 63.590 1.00 51.43 P
ATOM 3 OP1 A A 501 28.347 155.819 64.612 1.00 49.80 O
ATOM 4 OP2 A A 501 29.111 158.199 63.994 1.00 51.54 O
ATOM 5 O5' A A 501 30.065 156.215 62.841 1.00 51.65 O
ATOM 6 C5' A A 501 30.073 154.863 62.379 1.00 54.66 C
ATOM 7 C4' A A 501 30.758 154.771 61.042 1.00 57.55 C
ATOM 8 O4' A A 501 29.918 155.381 60.029 1.00 57.88 O
ATOM 9 C3' A A 501 32.116 155.445 60.953 1.00 60.01 C
ATOM 10 O3' A A 501 33.013 154.668 60.184 1.00 64.49 O
ATOM 11 C2' A A 501 31.803 156.771 60.276 1.00 60.15 C
ATOM 12 O2' A A 501 32.876 157.260 59.500 1.00 61.99 O
ATOM 13 C1' A A 501 30.617 156.423 59.381 1.00 58.79 C
ATOM 14 N9 A A 501 29.720 157.577 59.305 1.00 59.90 N
ATOM 15 C8 A A 501 28.892 158.035 60.303 1.00 60.40 C
ATOM 16 N7 A A 501 28.238 159.128 59.995 1.00 60.53 N
ATOM 17 C5 A A 501 28.651 159.405 58.702 1.00 61.66 C
ATOM 18 C6 A A 501 28.328 160.445 57.816 1.00 62.30 C
ATOM 19 N6 A A 501 27.485 161.434 58.121 1.00 62.07 N
ATOM 20 N1 A A 501 28.911 160.435 56.595 1.00 62.50 N
ATOM 21 C2 A A 501 29.762 159.439 56.300 1.00 62.32 C
ATOM 22 N3 A A 501 30.147 158.406 57.052 1.00 61.86 N
ATOM 23 C4 A A 501 29.552 158.448 58.255 1.00 61.42 C
ATOM 24 P G A 502 34.415 154.215 60.831 1.00 69.24 P
ATOM 25 OP1 G A 502 34.258 154.095 62.314 1.00 66.69 O
ATOM 26 OP2 G A 502 35.471 155.105 60.276 1.00 68.62 O
ATOM 27 O5' G A 502 34.650 152.746 60.254 1.00 72.37 O
TER
ATOM 1 O3' G B 475 25.843 163.481 55.568 1.00 44.30 O
ATOM 2 P U B 476 26.478 164.854 56.092 1.00 42.40 P
ATOM 3 OP1 U B 476 26.903 165.658 54.922 1.00 42.41 O
ATOM 4 OP2 U B 476 27.471 164.516 57.142 1.00 43.45 O
ATOM 5 O5' U B 476 25.246 165.566 56.802 1.00 41.81 O
ATOM 6 C5' U B 476 24.105 165.998 56.046 1.00 43.02 C
ATOM 7 C4' U B 476 22.910 166.137 56.952 1.00 44.87 C
ATOM 8 O4' U B 476 22.609 164.844 57.514 1.00 46.56 O
ATOM 9 C3' U B 476 23.117 166.996 58.188 1.00 46.94 C
ATOM 10 O3' U B 476 22.932 168.371 57.865 1.00 49.79 O
ATOM 11 C2' U B 476 22.013 166.501 59.118 1.00 46.74 C
ATOM 12 O2' U B 476 20.761 167.092 58.862 1.00 46.18 O
ATOM 13 C1' U B 476 21.920 165.021 58.737 1.00 47.50 C
ATOM 14 N1 U B 476 22.430 164.058 59.730 1.00 50.15 N
ATOM 15 C2 U B 476 21.777 163.987 60.953 1.00 50.89 C
ATOM 16 O2 U B 476 20.830 164.699 61.244 1.00 51.63 O
ATOM 17 N3 U B 476 22.277 163.051 61.822 1.00 50.62 N
ATOM 18 C4 U B 476 23.337 162.201 61.606 1.00 50.11 C
ATOM 19 O4 U B 476 23.659 161.407 62.486 1.00 51.44 O
ATOM 20 C5 U B 476 23.967 162.338 60.331 1.00 50.04 C
ATOM 21 C6 U B 476 23.508 163.238 59.460 1.00 50.54 C
ATOM 22 P A B 477 23.962 169.479 58.409 1.00 51.13 P
ATOM 23 OP1 A B 477 25.236 169.359 57.651 1.00 50.80 O
ATOM 24 OP2 A B 477 23.984 169.410 59.893 1.00 51.23 O
ATOM 25 O5' A B 477 23.266 170.847 57.974 1.00 52.95 O
TER
Atoms:
OP1: (28.347,155.819,64.612)
OP2: (29.111,158.199,63.994)
C3': (32.116,155.445,60.953)
C1': (30.617,156.423,59.381)
C5': (30.073,154.863,62.379)
O4': (29.918,155.381,60.029)
C8: (28.892,158.035,60.303)
O2': (32.876,157.260,59.500)
C6: (28.328,160.445,57.816)
C5: (28.651,159.405,58.702)
C4: (29.552,158.448,58.255)
P: (28.791,156.805,63.590)
C4': (30.758,154.771,61.042)
C2': (31.803,156.771,60.276)
C2: (29.762,159.439,56.300)
N1: (28.911,160.435,56.595)
N3: (30.147,158.406,57.052)
N6: (27.485,161.434,58.121)
N7: (28.238,159.128,59.995)
N9: (29.720,157.577,59.305)
O5': (30.065,156.215,62.841)
O3': (33.013,154.668,60.184)
OP2: (29.111,158.199,63.994)
C3': (32.116,155.445,60.953)
C1': (30.617,156.423,59.381)
C5': (30.073,154.863,62.379)
O4': (29.918,155.381,60.029)
C8: (28.892,158.035,60.303)
O2': (32.876,157.260,59.500)
C6: (28.328,160.445,57.816)
C5: (28.651,159.405,58.702)
C4: (29.552,158.448,58.255)
P: (28.791,156.805,63.590)
C4': (30.758,154.771,61.042)
C2': (31.803,156.771,60.276)
C2: (29.762,159.439,56.300)
N1: (28.911,160.435,56.595)
N3: (30.147,158.406,57.052)
N6: (27.485,161.434,58.121)
N7: (28.238,159.128,59.995)
N9: (29.720,157.577,59.305)
O5': (30.065,156.215,62.841)
O3': (33.013,154.668,60.184)
C4: (23.337,162.201,61.606)
N3: (22.277,163.051,61.822)
OP1: (26.903,165.658,54.922)
OP2: (27.471,164.516,57.142)
C2: (21.777,163.987,60.953)
C1': (21.920,165.021,58.737)
C3': (23.117,166.996,58.188)
O5': (25.246,165.566,56.802)
O4': (22.609,164.844,57.514)
C5': (24.105,165.998,56.046)
P: (26.478,164.854,56.092)
C4': (22.910,166.137,56.952)
C2': (22.013,166.501,59.118)
O2': (20.761,167.092,58.862)
N1: (22.430,164.058,59.730)
O4: (23.659,161.407,62.486)
O2: (20.830,164.699,61.244)
C6: (23.508,163.238,59.460)
C5: (23.967,162.338,60.331)
O3': (22.932,168.371,57.865)
N3: (22.277,163.051,61.822)
OP1: (26.903,165.658,54.922)
OP2: (27.471,164.516,57.142)
C2: (21.777,163.987,60.953)
C1': (21.920,165.021,58.737)
C3': (23.117,166.996,58.188)
O5': (25.246,165.566,56.802)
O4': (22.609,164.844,57.514)
C5': (24.105,165.998,56.046)
P: (26.478,164.854,56.092)
C4': (22.910,166.137,56.952)
C2': (22.013,166.501,59.118)
O2': (20.761,167.092,58.862)
N1: (22.430,164.058,59.730)
O4: (23.659,161.407,62.486)
O2: (20.830,164.699,61.244)
C6: (23.508,163.238,59.460)
C5: (23.967,162.338,60.331)
O3': (22.932,168.371,57.865)
Image (generated by PyMOL):