Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0681:0720
Extra
PDB:
ATOM 1 O3' A A 680 65.130 74.337 45.673 1.00 37.58 O
ATOM 2 P A A 681 64.158 73.849 44.501 1.00 38.50 P
ATOM 3 OP1 A A 681 63.543 75.041 43.866 1.00 37.54 O
ATOM 4 OP2 A A 681 63.285 72.808 45.093 1.00 41.15 O
ATOM 5 O5' A A 681 65.143 73.169 43.454 1.00 36.70 O
ATOM 6 C5' A A 681 66.122 73.953 42.766 1.00 38.51 C
ATOM 7 C4' A A 681 67.119 73.063 42.075 1.00 39.87 C
ATOM 8 O4' A A 681 67.734 72.202 43.060 1.00 40.26 O
ATOM 9 C3' A A 681 66.566 72.109 41.032 1.00 40.72 C
ATOM 10 O3' A A 681 66.429 72.766 39.774 1.00 42.36 O
ATOM 11 C2' A A 681 67.638 71.032 41.007 1.00 40.88 C
ATOM 12 O2' A A 681 68.799 71.452 40.329 1.00 40.60 O
ATOM 13 C1' A A 681 67.987 70.934 42.490 1.00 42.10 C
ATOM 14 N9 A A 681 67.171 69.951 43.201 1.00 45.60 N
ATOM 15 C8 A A 681 65.929 70.124 43.768 1.00 46.69 C
ATOM 16 N7 A A 681 65.457 69.048 44.348 1.00 46.83 N
ATOM 17 C5 A A 681 66.452 68.103 44.149 1.00 47.83 C
ATOM 18 C6 A A 681 66.558 66.763 44.520 1.00 49.19 C
ATOM 19 N6 A A 681 65.618 66.112 45.207 1.00 50.38 N
ATOM 20 N1 A A 681 67.676 66.098 44.158 1.00 50.57 N
ATOM 21 C2 A A 681 68.618 66.752 43.467 1.00 49.12 C
ATOM 22 N3 A A 681 68.636 68.012 43.064 1.00 48.54 N
ATOM 23 C4 A A 681 67.511 68.643 43.441 1.00 47.15 C
ATOM 24 P A A 682 65.389 72.209 38.682 1.00 42.89 P
ATOM 25 OP1 A A 682 65.453 73.140 37.529 1.00 43.24 O
ATOM 26 OP2 A A 682 64.088 71.970 39.348 1.00 42.25 O
ATOM 27 O5' A A 682 66.024 70.819 38.223 1.00 42.91 O
TER
ATOM 1 O3' C B 719 63.963 64.360 47.375 1.00 39.24 O
ATOM 2 P U B 720 64.999 63.139 47.312 1.00 41.70 P
ATOM 3 OP1 U B 720 66.304 63.674 46.870 1.00 43.64 O
ATOM 4 OP2 U B 720 64.368 62.037 46.554 1.00 42.37 O
ATOM 5 O5' U B 720 65.143 62.691 48.830 1.00 42.60 O
ATOM 6 C5' U B 720 65.643 63.606 49.807 1.00 45.44 C
ATOM 7 C4' U B 720 65.521 63.020 51.190 1.00 47.73 C
ATOM 8 O4' U B 720 64.127 62.898 51.571 1.00 48.75 O
ATOM 9 C3' U B 720 66.053 61.616 51.377 1.00 48.38 C
ATOM 10 O3' U B 720 67.466 61.599 51.484 1.00 51.33 O
ATOM 11 C2' U B 720 65.372 61.201 52.673 1.00 47.96 C
ATOM 12 O2' U B 720 65.987 61.784 53.804 1.00 46.74 O
ATOM 13 C1' U B 720 63.988 61.826 52.491 1.00 48.72 C
ATOM 14 N1 U B 720 62.976 60.890 51.980 1.00 50.92 N
ATOM 15 C2 U B 720 62.041 60.394 52.876 1.00 51.53 C
ATOM 16 O2 U B 720 62.020 60.703 54.054 1.00 51.62 O
ATOM 17 N3 U B 720 61.128 59.523 52.339 1.00 52.09 N
ATOM 18 C4 U B 720 61.045 59.105 51.029 1.00 52.99 C
ATOM 19 O4 U B 720 60.144 58.334 50.695 1.00 53.70 O
ATOM 20 C5 U B 720 62.039 59.659 50.164 1.00 54.23 C
ATOM 21 C6 U B 720 62.948 60.511 50.656 1.00 53.25 C
ATOM 22 P U B 721 68.257 60.235 51.210 1.00 53.80 P
ATOM 23 OP1 U B 721 69.698 60.422 51.502 1.00 53.43 O
ATOM 24 OP2 U B 721 67.837 59.743 49.870 1.00 53.06 O
ATOM 25 O5' U B 721 67.668 59.254 52.315 1.00 59.81 O
TER
ATOM 2 P A A 681 64.158 73.849 44.501 1.00 38.50 P
ATOM 3 OP1 A A 681 63.543 75.041 43.866 1.00 37.54 O
ATOM 4 OP2 A A 681 63.285 72.808 45.093 1.00 41.15 O
ATOM 5 O5' A A 681 65.143 73.169 43.454 1.00 36.70 O
ATOM 6 C5' A A 681 66.122 73.953 42.766 1.00 38.51 C
ATOM 7 C4' A A 681 67.119 73.063 42.075 1.00 39.87 C
ATOM 8 O4' A A 681 67.734 72.202 43.060 1.00 40.26 O
ATOM 9 C3' A A 681 66.566 72.109 41.032 1.00 40.72 C
ATOM 10 O3' A A 681 66.429 72.766 39.774 1.00 42.36 O
ATOM 11 C2' A A 681 67.638 71.032 41.007 1.00 40.88 C
ATOM 12 O2' A A 681 68.799 71.452 40.329 1.00 40.60 O
ATOM 13 C1' A A 681 67.987 70.934 42.490 1.00 42.10 C
ATOM 14 N9 A A 681 67.171 69.951 43.201 1.00 45.60 N
ATOM 15 C8 A A 681 65.929 70.124 43.768 1.00 46.69 C
ATOM 16 N7 A A 681 65.457 69.048 44.348 1.00 46.83 N
ATOM 17 C5 A A 681 66.452 68.103 44.149 1.00 47.83 C
ATOM 18 C6 A A 681 66.558 66.763 44.520 1.00 49.19 C
ATOM 19 N6 A A 681 65.618 66.112 45.207 1.00 50.38 N
ATOM 20 N1 A A 681 67.676 66.098 44.158 1.00 50.57 N
ATOM 21 C2 A A 681 68.618 66.752 43.467 1.00 49.12 C
ATOM 22 N3 A A 681 68.636 68.012 43.064 1.00 48.54 N
ATOM 23 C4 A A 681 67.511 68.643 43.441 1.00 47.15 C
ATOM 24 P A A 682 65.389 72.209 38.682 1.00 42.89 P
ATOM 25 OP1 A A 682 65.453 73.140 37.529 1.00 43.24 O
ATOM 26 OP2 A A 682 64.088 71.970 39.348 1.00 42.25 O
ATOM 27 O5' A A 682 66.024 70.819 38.223 1.00 42.91 O
TER
ATOM 1 O3' C B 719 63.963 64.360 47.375 1.00 39.24 O
ATOM 2 P U B 720 64.999 63.139 47.312 1.00 41.70 P
ATOM 3 OP1 U B 720 66.304 63.674 46.870 1.00 43.64 O
ATOM 4 OP2 U B 720 64.368 62.037 46.554 1.00 42.37 O
ATOM 5 O5' U B 720 65.143 62.691 48.830 1.00 42.60 O
ATOM 6 C5' U B 720 65.643 63.606 49.807 1.00 45.44 C
ATOM 7 C4' U B 720 65.521 63.020 51.190 1.00 47.73 C
ATOM 8 O4' U B 720 64.127 62.898 51.571 1.00 48.75 O
ATOM 9 C3' U B 720 66.053 61.616 51.377 1.00 48.38 C
ATOM 10 O3' U B 720 67.466 61.599 51.484 1.00 51.33 O
ATOM 11 C2' U B 720 65.372 61.201 52.673 1.00 47.96 C
ATOM 12 O2' U B 720 65.987 61.784 53.804 1.00 46.74 O
ATOM 13 C1' U B 720 63.988 61.826 52.491 1.00 48.72 C
ATOM 14 N1 U B 720 62.976 60.890 51.980 1.00 50.92 N
ATOM 15 C2 U B 720 62.041 60.394 52.876 1.00 51.53 C
ATOM 16 O2 U B 720 62.020 60.703 54.054 1.00 51.62 O
ATOM 17 N3 U B 720 61.128 59.523 52.339 1.00 52.09 N
ATOM 18 C4 U B 720 61.045 59.105 51.029 1.00 52.99 C
ATOM 19 O4 U B 720 60.144 58.334 50.695 1.00 53.70 O
ATOM 20 C5 U B 720 62.039 59.659 50.164 1.00 54.23 C
ATOM 21 C6 U B 720 62.948 60.511 50.656 1.00 53.25 C
ATOM 22 P U B 721 68.257 60.235 51.210 1.00 53.80 P
ATOM 23 OP1 U B 721 69.698 60.422 51.502 1.00 53.43 O
ATOM 24 OP2 U B 721 67.837 59.743 49.870 1.00 53.06 O
ATOM 25 O5' U B 721 67.668 59.254 52.315 1.00 59.81 O
TER
Atoms:
OP1: (63.543,75.041,43.866)
OP2: (63.285,72.808,45.093)
C3': (66.566,72.109,41.032)
C1': (67.987,70.934,42.490)
C5': (66.122,73.953,42.766)
O4': (67.734,72.202,43.060)
C8: (65.929,70.124,43.768)
O2': (68.799,71.452,40.329)
C6: (66.558,66.763,44.520)
C5: (66.452,68.103,44.149)
C4: (67.511,68.643,43.441)
P: (64.158,73.849,44.501)
C4': (67.119,73.063,42.075)
C2': (67.638,71.032,41.007)
C2: (68.618,66.752,43.467)
N1: (67.676,66.098,44.158)
N3: (68.636,68.012,43.064)
N6: (65.618,66.112,45.207)
N7: (65.457,69.048,44.348)
N9: (67.171,69.951,43.201)
O5': (65.143,73.169,43.454)
O3': (66.429,72.766,39.774)
OP2: (63.285,72.808,45.093)
C3': (66.566,72.109,41.032)
C1': (67.987,70.934,42.490)
C5': (66.122,73.953,42.766)
O4': (67.734,72.202,43.060)
C8: (65.929,70.124,43.768)
O2': (68.799,71.452,40.329)
C6: (66.558,66.763,44.520)
C5: (66.452,68.103,44.149)
C4: (67.511,68.643,43.441)
P: (64.158,73.849,44.501)
C4': (67.119,73.063,42.075)
C2': (67.638,71.032,41.007)
C2: (68.618,66.752,43.467)
N1: (67.676,66.098,44.158)
N3: (68.636,68.012,43.064)
N6: (65.618,66.112,45.207)
N7: (65.457,69.048,44.348)
N9: (67.171,69.951,43.201)
O5': (65.143,73.169,43.454)
O3': (66.429,72.766,39.774)
C4: (61.045,59.105,51.029)
N3: (61.128,59.523,52.339)
OP1: (66.304,63.674,46.870)
OP2: (64.368,62.037,46.554)
C2: (62.041,60.394,52.876)
C1': (63.988,61.826,52.491)
C3': (66.053,61.616,51.377)
O5': (65.143,62.691,48.830)
O4': (64.127,62.898,51.571)
C5': (65.643,63.606,49.807)
P: (64.999,63.139,47.312)
C4': (65.521,63.020,51.190)
C2': (65.372,61.201,52.673)
O2': (65.987,61.784,53.804)
N1: (62.976,60.890,51.980)
O4: (60.144,58.334,50.695)
O2: (62.020,60.703,54.054)
C6: (62.948,60.511,50.656)
C5: (62.039,59.659,50.164)
O3': (67.466,61.599,51.484)
N3: (61.128,59.523,52.339)
OP1: (66.304,63.674,46.870)
OP2: (64.368,62.037,46.554)
C2: (62.041,60.394,52.876)
C1': (63.988,61.826,52.491)
C3': (66.053,61.616,51.377)
O5': (65.143,62.691,48.830)
O4': (64.127,62.898,51.571)
C5': (65.643,63.606,49.807)
P: (64.999,63.139,47.312)
C4': (65.521,63.020,51.190)
C2': (65.372,61.201,52.673)
O2': (65.987,61.784,53.804)
N1: (62.976,60.890,51.980)
O4: (60.144,58.334,50.695)
O2: (62.020,60.703,54.054)
C6: (62.948,60.511,50.656)
C5: (62.039,59.659,50.164)
O3': (67.466,61.599,51.484)
Image (generated by PyMOL):