ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HOL:A54:A58

Extra

PDB:
ATOM 1 O3' G A 53 34.125 53.317 80.021 1.00 37.64 O
ATOM 2 P A A 54 32.903 54.040 80.767 1.00 39.96 P
ATOM 3 OP1 A A 54 33.421 55.297 81.364 1.00 40.18 O
ATOM 4 OP2 A A 54 32.210 53.046 81.630 1.00 40.10 O
ATOM 5 O5' A A 54 31.917 54.411 79.575 1.00 39.93 O
ATOM 6 C5' A A 54 30.530 54.592 79.799 1.00 38.17 C
ATOM 7 C4' A A 54 29.787 54.549 78.490 1.00 38.03 C
ATOM 8 O4' A A 54 30.057 53.287 77.819 1.00 38.78 O
ATOM 9 C3' A A 54 28.282 54.578 78.656 1.00 38.93 C
ATOM 10 O3' A A 54 27.826 55.911 78.766 1.00 38.46 O
ATOM 11 C2' A A 54 27.805 53.855 77.409 1.00 37.95 C
ATOM 12 O2' A A 54 27.870 54.661 76.258 1.00 35.74 O
ATOM 13 C1' A A 54 28.848 52.740 77.321 1.00 38.92 C
ATOM 14 N9 A A 54 28.498 51.612 78.181 1.00 40.13 N
ATOM 15 C8 A A 54 29.137 51.220 79.329 1.00 42.68 C
ATOM 16 N7 A A 54 28.585 50.187 79.916 1.00 43.68 N
ATOM 17 C5 A A 54 27.513 49.874 79.095 1.00 42.08 C
ATOM 18 C6 A A 54 26.536 48.882 79.169 1.00 41.74 C
ATOM 19 N6 A A 54 26.472 47.984 80.147 1.00 41.09 N
ATOM 20 N1 A A 54 25.608 48.842 78.191 1.00 43.22 N
ATOM 21 C2 A A 54 25.670 49.745 77.212 1.00 40.30 C
ATOM 22 N3 A A 54 26.543 50.727 77.031 1.00 41.54 N
ATOM 23 C4 A A 54 27.451 50.739 78.020 1.00 41.16 C
ATOM 24 P U A 55 26.952 56.333 80.039 1.00 38.58 P
ATOM 25 OP1 U A 55 26.815 57.807 80.042 1.00 40.11 O
ATOM 26 OP2 U A 55 27.511 55.641 81.229 1.00 36.69 O
ATOM 27 O5' U A 55 25.534 55.689 79.727 1.00 39.08 O
TER

ATOM 1 O3' A B 57 21.094 46.404 81.497 1.00 27.71 O
ATOM 2 P U B 58 22.633 46.032 81.167 1.00 29.75 P
ATOM 3 OP1 U B 58 23.016 45.127 82.285 1.00 28.88 O
ATOM 4 OP2 U B 58 23.470 47.232 80.872 1.00 25.12 O
ATOM 5 O5' U B 58 22.540 45.162 79.836 1.00 27.35 O
ATOM 6 C5' U B 58 21.835 43.923 79.835 1.00 27.00 C
ATOM 7 C4' U B 58 21.392 43.568 78.440 1.00 27.78 C
ATOM 8 O4' U B 58 20.515 44.606 77.933 1.00 28.77 O
ATOM 9 C3' U B 58 22.486 43.498 77.393 1.00 27.47 C
ATOM 10 O3' U B 58 23.132 42.239 77.429 1.00 24.31 O
ATOM 11 C2' U B 58 21.697 43.661 76.102 1.00 28.81 C
ATOM 12 O2' U B 58 21.067 42.451 75.721 1.00 31.69 O
ATOM 13 C1' U B 58 20.637 44.680 76.523 1.00 29.47 C
ATOM 14 N1 U B 58 20.990 46.055 76.153 1.00 31.43 N
ATOM 15 C2 U B 58 20.499 46.527 74.952 1.00 33.48 C
ATOM 16 O2 U B 58 19.798 45.848 74.221 1.00 33.99 O
ATOM 17 N3 U B 58 20.859 47.817 74.642 1.00 33.48 N
ATOM 18 C4 U B 58 21.649 48.661 75.400 1.00 35.93 C
ATOM 19 O4 U B 58 21.886 49.804 74.993 1.00 40.24 O
ATOM 20 C5 U B 58 22.118 48.094 76.631 1.00 33.36 C
ATOM 21 C6 U B 58 21.779 46.842 76.958 1.00 31.54 C
ATOM 22 P G B 59 24.638 42.115 76.904 1.00 24.98 P
ATOM 23 OP1 G B 59 25.186 40.849 77.435 1.00 25.32 O
ATOM 24 OP2 G B 59 25.308 43.397 77.216 1.00 22.56 O
ATOM 25 O5' G B 59 24.502 41.985 75.324 1.00 25.72 O
TER

Atoms:
OP1: (33.421,55.297,81.364)
OP2: (32.210,53.046,81.630)
C3': (28.282,54.578,78.656)
C1': (28.848,52.740,77.321)
C5': (30.530,54.592,79.799)
O4': (30.057,53.287,77.819)
C8: (29.137,51.220,79.329)
O2': (27.870,54.661,76.258)
C6: (26.536,48.882,79.169)
C5: (27.513,49.874,79.095)
C4: (27.451,50.739,78.020)
P: (32.903,54.040,80.767)
C4': (29.787,54.549,78.490)
C2': (27.805,53.855,77.409)
C2: (25.670,49.745,77.212)
N1: (25.608,48.842,78.191)
N3: (26.543,50.727,77.031)
N6: (26.472,47.984,80.147)
N7: (28.585,50.187,79.916)
N9: (28.498,51.612,78.181)
O5': (31.917,54.411,79.575)
O3': (27.826,55.911,78.766)
C4: (21.649,48.661,75.400)
N3: (20.859,47.817,74.642)
OP1: (23.016,45.127,82.285)
OP2: (23.470,47.232,80.872)
C2: (20.499,46.527,74.952)
C1': (20.637,44.680,76.523)
C3': (22.486,43.498,77.393)
O5': (22.540,45.162,79.836)
O4': (20.515,44.606,77.933)
C5': (21.835,43.923,79.835)
P: (22.633,46.032,81.167)
C4': (21.392,43.568,78.440)
C2': (21.697,43.661,76.102)
O2': (21.067,42.451,75.721)
N1: (20.990,46.055,76.153)
O4: (21.886,49.804,74.993)
O2: (19.798,45.848,74.221)
C6: (21.779,46.842,76.958)
C5: (22.118,48.094,76.631)
O3': (23.132,42.239,77.429)
Image (generated by PyMOL):
PyMOL image
show in jmol