ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A794:A791

Extra

PDB:
ATOM 1 O3' A A 793 -20.074 109.254 81.858 1.00 18.10 O
ATOM 2 P A A 794 -18.764 110.099 82.038 1.00 13.89 P
ATOM 3 OP1 A A 794 -18.997 110.846 83.314 1.00 10.99 O
ATOM 4 OP2 A A 794 -18.446 110.831 80.797 1.00 9.48 O
ATOM 5 O5' A A 794 -17.679 108.945 82.215 1.00 5.93 O
ATOM 6 C5' A A 794 -16.880 108.849 83.376 1.00 6.36 C
ATOM 7 C4' A A 794 -15.452 109.085 83.013 1.00 5.93 C
ATOM 8 O4' A A 794 -14.777 109.519 84.196 1.00 6.50 O
ATOM 9 C3' A A 794 -14.661 107.902 82.501 1.00 5.93 C
ATOM 10 O3' A A 794 -14.730 107.799 81.086 1.00 6.45 O
ATOM 11 C2' A A 794 -13.244 108.265 82.895 1.00 5.93 C
ATOM 12 O2' A A 794 -12.673 109.114 81.919 1.00 5.93 O
ATOM 13 C1' A A 794 -13.469 109.032 84.196 1.00 5.93 C
ATOM 14 N9 A A 794 -13.324 108.235 85.399 1.00 0.79 N
ATOM 15 C8 A A 794 -14.138 107.247 85.881 1.00 0.79 C
ATOM 16 N7 A A 794 -13.718 106.721 87.002 1.00 0.79 N
ATOM 17 C5 A A 794 -12.548 107.418 87.273 1.00 0.79 C
ATOM 18 C6 A A 794 -11.622 107.339 88.315 1.00 0.79 C
ATOM 19 N6 A A 794 -11.738 106.511 89.347 1.00 0.79 N
ATOM 20 N1 A A 794 -10.553 108.162 88.267 1.00 0.79 N
ATOM 21 C2 A A 794 -10.445 109.024 87.248 1.00 1.69 C
ATOM 22 N3 A A 794 -11.260 109.206 86.225 1.00 0.79 N
ATOM 23 C4 A A 794 -12.300 108.354 86.294 1.00 0.79 C
ATOM 24 P C A 795 -14.166 106.473 80.328 1.00 9.07 P
ATOM 25 OP1 C A 795 -14.528 105.227 81.087 1.00 3.52 O
ATOM 26 OP2 C A 795 -12.737 106.710 79.933 1.00 3.52 O
ATOM 27 O5' C A 795 -15.086 106.451 79.029 1.00 8.06 O
TER

ATOM 1 O3' C B 790 -10.583 107.265 93.464 1.00 11.01 O
ATOM 2 P U B 791 -10.691 105.785 92.847 1.00 2.10 P
ATOM 3 OP1 U B 791 -10.410 104.812 93.926 1.00 8.10 O
ATOM 4 OP2 U B 791 -9.905 105.722 91.593 1.00 5.35 O
ATOM 5 O5' U B 791 -12.240 105.703 92.518 1.00 23.53 O
ATOM 6 C5' U B 791 -13.189 105.765 93.590 1.00 23.49 C
ATOM 7 C4' U B 791 -14.260 106.802 93.317 1.00 22.44 C
ATOM 8 O4' U B 791 -13.745 108.147 93.456 1.00 22.42 O
ATOM 9 C3' U B 791 -14.901 106.802 91.942 1.00 22.58 C
ATOM 10 O3' U B 791 -15.869 105.782 91.809 1.00 21.25 O
ATOM 11 C2' U B 791 -15.531 108.184 91.877 1.00 22.76 C
ATOM 12 O2' U B 791 -16.762 108.261 92.562 1.00 25.42 O
ATOM 13 C1' U B 791 -14.518 109.024 92.649 1.00 22.24 C
ATOM 14 N1 U B 791 -13.643 109.791 91.748 1.00 1.55 N
ATOM 15 C2 U B 791 -14.219 110.845 91.059 1.00 1.55 C
ATOM 16 O2 U B 791 -15.390 111.172 91.194 1.00 3.92 O
ATOM 17 N3 U B 791 -13.375 111.514 90.218 1.00 1.55 N
ATOM 18 C4 U B 791 -12.035 111.267 90.024 1.00 1.55 C
ATOM 19 O4 U B 791 -11.365 112.059 89.364 1.00 3.96 O
ATOM 20 C5 U B 791 -11.517 110.170 90.772 1.00 1.55 C
ATOM 21 C6 U B 791 -12.319 109.486 91.584 1.00 1.55 C
ATOM 22 P A B 792 -15.979 104.978 90.424 1.00 34.56 P
ATOM 23 OP1 A B 792 -16.959 103.882 90.680 1.00 26.55 O
ATOM 24 OP2 A B 792 -14.617 104.648 89.914 1.00 24.72 O
ATOM 25 O5' A B 792 -16.638 106.038 89.443 1.00 24.66 O
TER

Atoms:
OP1: (-18.997,110.846,83.314)
OP2: (-18.446,110.831,80.797)
C3': (-14.661,107.902,82.501)
C1': (-13.469,109.032,84.196)
C5': (-16.880,108.849,83.376)
O4': (-14.777,109.519,84.196)
C8: (-14.138,107.247,85.881)
O2': (-12.673,109.114,81.919)
C6: (-11.622,107.339,88.315)
C5: (-12.548,107.418,87.273)
C4: (-12.300,108.354,86.294)
P: (-18.764,110.099,82.038)
C4': (-15.452,109.085,83.013)
C2': (-13.244,108.265,82.895)
C2: (-10.445,109.024,87.248)
N1: (-10.553,108.162,88.267)
N3: (-11.260,109.206,86.225)
N6: (-11.738,106.511,89.347)
N7: (-13.718,106.721,87.002)
N9: (-13.324,108.235,85.399)
O5': (-17.679,108.945,82.215)
O3': (-14.730,107.799,81.086)
C4: (-12.035,111.267,90.024)
N3: (-13.375,111.514,90.218)
OP1: (-10.410,104.812,93.926)
OP2: (-9.905,105.722,91.593)
C2: (-14.219,110.845,91.059)
C1': (-14.518,109.024,92.649)
C3': (-14.901,106.802,91.942)
O5': (-12.240,105.703,92.518)
O4': (-13.745,108.147,93.456)
C5': (-13.189,105.765,93.590)
P: (-10.691,105.785,92.847)
C4': (-14.260,106.802,93.317)
C2': (-15.531,108.184,91.877)
O2': (-16.762,108.261,92.562)
N1: (-13.643,109.791,91.748)
O4: (-11.365,112.059,89.364)
O2: (-15.390,111.172,91.194)
C6: (-12.319,109.486,91.584)
C5: (-11.517,110.170,90.772)
O3': (-15.869,105.782,91.809)
Image (generated by PyMOL):
PyMOL image
show in jmol