Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1709:A1704
Extra
PDB:
ATOM 1 O3' A A1708 -9.839 119.028 150.782 1.00 2.72 O
ATOM 2 P A A1709 -8.269 118.704 150.690 1.00 12.65 P
ATOM 3 OP1 A A1709 -8.179 117.234 150.858 1.00 21.61 O
ATOM 4 OP2 A A1709 -7.480 119.597 151.586 1.00 21.61 O
ATOM 5 O5' A A1709 -7.882 119.056 149.179 1.00 0.79 O
ATOM 6 C5' A A1709 -8.528 118.396 148.075 1.00 0.79 C
ATOM 7 C4' A A1709 -7.621 118.375 146.876 1.00 0.79 C
ATOM 8 O4' A A1709 -7.443 119.724 146.416 1.00 0.79 O
ATOM 9 C3' A A1709 -6.231 117.782 147.066 1.00 0.79 C
ATOM 10 O3' A A1709 -5.873 117.099 145.879 1.00 0.79 O
ATOM 11 C2' A A1709 -5.336 119.004 147.231 1.00 0.79 C
ATOM 12 O2' A A1709 -4.030 118.801 146.700 1.00 0.79 O
ATOM 13 C1' A A1709 -6.079 120.067 146.425 1.00 0.79 C
ATOM 14 N9 A A1709 -6.004 121.374 147.059 1.00 8.89 N
ATOM 15 C8 A A1709 -7.063 122.045 147.601 1.00 8.89 C
ATOM 16 N7 A A1709 -6.744 123.189 148.134 1.00 8.89 N
ATOM 17 C5 A A1709 -5.385 123.291 147.917 1.00 8.89 C
ATOM 18 C6 A A1709 -4.461 124.291 148.239 1.00 8.89 C
ATOM 19 N6 A A1709 -4.792 125.428 148.860 1.00 8.89 N
ATOM 20 N1 A A1709 -3.173 124.091 147.893 1.00 8.89 N
ATOM 21 C2 A A1709 -2.861 122.956 147.252 1.00 8.89 C
ATOM 22 N3 A A1709 -3.649 121.945 146.887 1.00 8.89 N
ATOM 23 C4 A A1709 -4.912 122.179 147.256 1.00 8.89 C
ATOM 24 P A A1710 -6.671 115.774 145.461 1.00 9.76 P
ATOM 25 OP1 A A1710 -6.932 114.986 146.685 1.00 13.66 O
ATOM 26 OP2 A A1710 -5.937 115.163 144.324 1.00 13.66 O
ATOM 27 O5' A A1710 -8.068 116.319 144.948 1.00 4.68 O
TER
ATOM 1 O3' U B1703 -4.644 128.887 147.813 1.00 0.79 O
ATOM 2 P U B1704 -3.900 128.685 149.218 1.00 7.88 P
ATOM 3 OP1 U B1704 -3.258 129.957 149.583 1.00 12.07 O
ATOM 4 OP2 U B1704 -3.095 127.429 149.209 1.00 12.07 O
ATOM 5 O5' U B1704 -5.087 128.531 150.244 1.00 3.49 O
ATOM 6 C5' U B1704 -5.852 129.655 150.588 1.00 3.49 C
ATOM 7 C4' U B1704 -7.220 129.217 151.000 1.00 3.49 C
ATOM 8 O4' U B1704 -7.899 128.608 149.890 1.00 3.49 O
ATOM 9 C3' U B1704 -7.305 128.110 152.040 1.00 3.49 C
ATOM 10 O3' U B1704 -7.202 128.622 153.340 1.00 3.49 O
ATOM 11 C2' U B1704 -8.718 127.579 151.865 1.00 3.49 C
ATOM 12 O2' U B1704 -9.652 128.281 152.649 1.00 3.49 O
ATOM 13 C1' U B1704 -8.996 127.911 150.408 1.00 3.49 C
ATOM 14 N1 U B1704 -9.296 126.744 149.593 1.00 12.53 N
ATOM 15 C2 U B1704 -10.617 126.571 149.308 1.00 12.53 C
ATOM 16 O2 U B1704 -11.464 127.354 149.679 1.00 12.53 O
ATOM 17 N3 U B1704 -10.921 125.463 148.575 1.00 12.53 N
ATOM 18 C4 U B1704 -10.046 124.545 148.100 1.00 12.53 C
ATOM 19 O4 U B1704 -10.480 123.589 147.467 1.00 12.53 O
ATOM 20 C5 U B1704 -8.675 124.802 148.423 1.00 12.53 C
ATOM 21 C6 U B1704 -8.354 125.870 149.148 1.00 12.53 C
ATOM 22 P A B1705 -6.381 127.818 154.443 1.00 14.96 P
ATOM 23 OP1 A B1705 -6.105 126.437 153.955 1.00 51.75 O
ATOM 24 OP2 A B1705 -7.169 128.029 155.694 1.00 51.75 O
ATOM 25 O5' A B1705 -5.006 128.623 154.531 1.00 17.10 O
TER
ATOM 2 P A A1709 -8.269 118.704 150.690 1.00 12.65 P
ATOM 3 OP1 A A1709 -8.179 117.234 150.858 1.00 21.61 O
ATOM 4 OP2 A A1709 -7.480 119.597 151.586 1.00 21.61 O
ATOM 5 O5' A A1709 -7.882 119.056 149.179 1.00 0.79 O
ATOM 6 C5' A A1709 -8.528 118.396 148.075 1.00 0.79 C
ATOM 7 C4' A A1709 -7.621 118.375 146.876 1.00 0.79 C
ATOM 8 O4' A A1709 -7.443 119.724 146.416 1.00 0.79 O
ATOM 9 C3' A A1709 -6.231 117.782 147.066 1.00 0.79 C
ATOM 10 O3' A A1709 -5.873 117.099 145.879 1.00 0.79 O
ATOM 11 C2' A A1709 -5.336 119.004 147.231 1.00 0.79 C
ATOM 12 O2' A A1709 -4.030 118.801 146.700 1.00 0.79 O
ATOM 13 C1' A A1709 -6.079 120.067 146.425 1.00 0.79 C
ATOM 14 N9 A A1709 -6.004 121.374 147.059 1.00 8.89 N
ATOM 15 C8 A A1709 -7.063 122.045 147.601 1.00 8.89 C
ATOM 16 N7 A A1709 -6.744 123.189 148.134 1.00 8.89 N
ATOM 17 C5 A A1709 -5.385 123.291 147.917 1.00 8.89 C
ATOM 18 C6 A A1709 -4.461 124.291 148.239 1.00 8.89 C
ATOM 19 N6 A A1709 -4.792 125.428 148.860 1.00 8.89 N
ATOM 20 N1 A A1709 -3.173 124.091 147.893 1.00 8.89 N
ATOM 21 C2 A A1709 -2.861 122.956 147.252 1.00 8.89 C
ATOM 22 N3 A A1709 -3.649 121.945 146.887 1.00 8.89 N
ATOM 23 C4 A A1709 -4.912 122.179 147.256 1.00 8.89 C
ATOM 24 P A A1710 -6.671 115.774 145.461 1.00 9.76 P
ATOM 25 OP1 A A1710 -6.932 114.986 146.685 1.00 13.66 O
ATOM 26 OP2 A A1710 -5.937 115.163 144.324 1.00 13.66 O
ATOM 27 O5' A A1710 -8.068 116.319 144.948 1.00 4.68 O
TER
ATOM 1 O3' U B1703 -4.644 128.887 147.813 1.00 0.79 O
ATOM 2 P U B1704 -3.900 128.685 149.218 1.00 7.88 P
ATOM 3 OP1 U B1704 -3.258 129.957 149.583 1.00 12.07 O
ATOM 4 OP2 U B1704 -3.095 127.429 149.209 1.00 12.07 O
ATOM 5 O5' U B1704 -5.087 128.531 150.244 1.00 3.49 O
ATOM 6 C5' U B1704 -5.852 129.655 150.588 1.00 3.49 C
ATOM 7 C4' U B1704 -7.220 129.217 151.000 1.00 3.49 C
ATOM 8 O4' U B1704 -7.899 128.608 149.890 1.00 3.49 O
ATOM 9 C3' U B1704 -7.305 128.110 152.040 1.00 3.49 C
ATOM 10 O3' U B1704 -7.202 128.622 153.340 1.00 3.49 O
ATOM 11 C2' U B1704 -8.718 127.579 151.865 1.00 3.49 C
ATOM 12 O2' U B1704 -9.652 128.281 152.649 1.00 3.49 O
ATOM 13 C1' U B1704 -8.996 127.911 150.408 1.00 3.49 C
ATOM 14 N1 U B1704 -9.296 126.744 149.593 1.00 12.53 N
ATOM 15 C2 U B1704 -10.617 126.571 149.308 1.00 12.53 C
ATOM 16 O2 U B1704 -11.464 127.354 149.679 1.00 12.53 O
ATOM 17 N3 U B1704 -10.921 125.463 148.575 1.00 12.53 N
ATOM 18 C4 U B1704 -10.046 124.545 148.100 1.00 12.53 C
ATOM 19 O4 U B1704 -10.480 123.589 147.467 1.00 12.53 O
ATOM 20 C5 U B1704 -8.675 124.802 148.423 1.00 12.53 C
ATOM 21 C6 U B1704 -8.354 125.870 149.148 1.00 12.53 C
ATOM 22 P A B1705 -6.381 127.818 154.443 1.00 14.96 P
ATOM 23 OP1 A B1705 -6.105 126.437 153.955 1.00 51.75 O
ATOM 24 OP2 A B1705 -7.169 128.029 155.694 1.00 51.75 O
ATOM 25 O5' A B1705 -5.006 128.623 154.531 1.00 17.10 O
TER
Atoms:
OP1: (-8.179,117.234,150.858)
OP2: (-7.480,119.597,151.586)
C3': (-6.231,117.782,147.066)
C1': (-6.079,120.067,146.425)
C5': (-8.528,118.396,148.075)
O4': (-7.443,119.724,146.416)
C8: (-7.063,122.045,147.601)
O2': (-4.030,118.801,146.700)
C6: (-4.461,124.291,148.239)
C5: (-5.385,123.291,147.917)
C4: (-4.912,122.179,147.256)
P: (-8.269,118.704,150.690)
C4': (-7.621,118.375,146.876)
C2': (-5.336,119.004,147.231)
C2: (-2.861,122.956,147.252)
N1: (-3.173,124.091,147.893)
N3: (-3.649,121.945,146.887)
N6: (-4.792,125.428,148.860)
N7: (-6.744,123.189,148.134)
N9: (-6.004,121.374,147.059)
O5': (-7.882,119.056,149.179)
O3': (-5.873,117.099,145.879)
OP2: (-7.480,119.597,151.586)
C3': (-6.231,117.782,147.066)
C1': (-6.079,120.067,146.425)
C5': (-8.528,118.396,148.075)
O4': (-7.443,119.724,146.416)
C8: (-7.063,122.045,147.601)
O2': (-4.030,118.801,146.700)
C6: (-4.461,124.291,148.239)
C5: (-5.385,123.291,147.917)
C4: (-4.912,122.179,147.256)
P: (-8.269,118.704,150.690)
C4': (-7.621,118.375,146.876)
C2': (-5.336,119.004,147.231)
C2: (-2.861,122.956,147.252)
N1: (-3.173,124.091,147.893)
N3: (-3.649,121.945,146.887)
N6: (-4.792,125.428,148.860)
N7: (-6.744,123.189,148.134)
N9: (-6.004,121.374,147.059)
O5': (-7.882,119.056,149.179)
O3': (-5.873,117.099,145.879)
C4: (-10.046,124.545,148.100)
N3: (-10.921,125.463,148.575)
OP1: (-3.258,129.957,149.583)
OP2: (-3.095,127.429,149.209)
C2: (-10.617,126.571,149.308)
C1': (-8.996,127.911,150.408)
C3': (-7.305,128.110,152.040)
O5': (-5.087,128.531,150.244)
O4': (-7.899,128.608,149.890)
C5': (-5.852,129.655,150.588)
P: (-3.900,128.685,149.218)
C4': (-7.220,129.217,151.000)
C2': (-8.718,127.579,151.865)
O2': (-9.652,128.281,152.649)
N1: (-9.296,126.744,149.593)
O4: (-10.480,123.589,147.467)
O2: (-11.464,127.354,149.679)
C6: (-8.354,125.870,149.148)
C5: (-8.675,124.802,148.423)
O3': (-7.202,128.622,153.340)
N3: (-10.921,125.463,148.575)
OP1: (-3.258,129.957,149.583)
OP2: (-3.095,127.429,149.209)
C2: (-10.617,126.571,149.308)
C1': (-8.996,127.911,150.408)
C3': (-7.305,128.110,152.040)
O5': (-5.087,128.531,150.244)
O4': (-7.899,128.608,149.890)
C5': (-5.852,129.655,150.588)
P: (-3.900,128.685,149.218)
C4': (-7.220,129.217,151.000)
C2': (-8.718,127.579,151.865)
O2': (-9.652,128.281,152.649)
N1: (-9.296,126.744,149.593)
O4: (-10.480,123.589,147.467)
O2: (-11.464,127.354,149.679)
C6: (-8.354,125.870,149.148)
C5: (-8.675,124.802,148.423)
O3': (-7.202,128.622,153.340)
Image (generated by PyMOL):