Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1021:A1090
Extra
PDB:
ATOM 1 O3' U A1020 -125.823 -84.566 -24.029 1.00 33.89 O
ATOM 2 P A A1021 -125.591 -84.497 -25.615 1.00 47.20 P
ATOM 3 OP1 A A1021 -125.870 -83.111 -26.064 1.00 79.89 O
ATOM 4 OP2 A A1021 -126.317 -85.635 -26.245 1.00 79.89 O
ATOM 5 O5' A A1021 -124.031 -84.745 -25.766 1.00 12.09 O
ATOM 6 C5' A A1021 -123.409 -84.639 -27.037 1.00 12.09 C
ATOM 7 C4' A A1021 -121.942 -84.864 -26.886 1.00 12.09 C
ATOM 8 O4' A A1021 -121.769 -85.944 -25.940 1.00 12.09 O
ATOM 9 C3' A A1021 -121.208 -85.256 -28.168 1.00 12.09 C
ATOM 10 O3' A A1021 -119.902 -84.670 -28.196 1.00 12.09 O
ATOM 11 C2' A A1021 -121.107 -86.778 -28.055 1.00 12.09 C
ATOM 12 O2' A A1021 -119.959 -87.307 -28.702 1.00 12.09 O
ATOM 13 C1' A A1021 -121.014 -86.971 -26.542 1.00 12.09 C
ATOM 14 N9 A A1021 -121.517 -88.254 -26.063 1.00 46.39 N
ATOM 15 C8 A A1021 -122.718 -88.531 -25.457 1.00 46.39 C
ATOM 16 N7 A A1021 -122.850 -89.785 -25.098 1.00 46.39 N
ATOM 17 C5 A A1021 -121.658 -90.377 -25.508 1.00 46.39 C
ATOM 18 C6 A A1021 -121.165 -91.701 -25.416 1.00 46.39 C
ATOM 19 N6 A A1021 -121.838 -92.715 -24.851 1.00 46.39 N
ATOM 20 N1 A A1021 -119.940 -91.949 -25.930 1.00 46.39 N
ATOM 21 C2 A A1021 -119.264 -90.942 -26.495 1.00 46.39 C
ATOM 22 N3 A A1021 -119.614 -89.666 -26.638 1.00 46.39 N
ATOM 23 C4 A A1021 -120.836 -89.447 -26.116 1.00 46.39 C
ATOM 24 P A A1022 -119.617 -83.385 -29.129 1.00 57.96 P
ATOM 25 OP1 A A1022 -120.912 -82.847 -29.640 1.00 42.55 O
ATOM 26 OP2 A A1022 -118.529 -83.735 -30.085 1.00 42.62 O
ATOM 27 O5' A A1022 -119.051 -82.302 -28.112 1.00 47.00 O
TER
ATOM 1 O3' U B1089 -119.948 -95.461 -24.154 1.00 30.94 O
ATOM 2 P U B1090 -120.791 -96.477 -25.082 1.00 25.85 P
ATOM 3 OP1 U B1090 -120.404 -97.868 -24.725 1.00 72.32 O
ATOM 4 OP2 U B1090 -120.651 -96.016 -26.490 1.00 72.31 O
ATOM 5 O5' U B1090 -122.305 -96.250 -24.655 1.00 57.55 O
ATOM 6 C5' U B1090 -122.684 -96.140 -23.272 1.00 57.55 C
ATOM 7 C4' U B1090 -123.731 -97.180 -22.926 1.00 57.55 C
ATOM 8 O4' U B1090 -124.528 -97.460 -24.115 1.00 57.55 O
ATOM 9 C3' U B1090 -123.221 -98.549 -22.497 1.00 57.55 C
ATOM 10 O3' U B1090 -122.889 -98.608 -21.112 1.00 57.55 O
ATOM 11 C2' U B1090 -124.400 -99.451 -22.842 1.00 57.55 C
ATOM 12 O2' U B1090 -125.431 -99.375 -21.876 1.00 57.55 O
ATOM 13 C1' U B1090 -124.888 -98.830 -24.150 1.00 57.55 C
ATOM 14 N1 U B1090 -124.224 -99.457 -25.304 1.00 67.50 N
ATOM 15 C2 U B1090 -124.974-100.269 -26.126 1.00 67.80 C
ATOM 16 O2 U B1090 -126.172-100.444 -25.970 1.00 67.88 O
ATOM 17 N3 U B1090 -124.266-100.871 -27.144 1.00 68.06 N
ATOM 18 C4 U B1090 -122.909-100.737 -27.417 1.00 67.92 C
ATOM 19 O4 U B1090 -122.394-101.386 -28.334 1.00 67.88 O
ATOM 20 C5 U B1090 -122.218 -99.858 -26.537 1.00 67.94 C
ATOM 21 C6 U B1090 -122.879 -99.262 -25.541 1.00 67.68 C
ATOM 22 P A B1091 -122.108 -99.895 -20.533 1.00107.11 P
ATOM 23 OP1 A B1091 -122.672-101.133 -21.142 1.00 67.86 O
ATOM 24 OP2 A B1091 -122.106 -99.734 -19.054 1.00 67.86 O
ATOM 25 O5' A B1091 -120.613 -99.779 -21.079 1.00 27.84 O
TER
ATOM 2 P A A1021 -125.591 -84.497 -25.615 1.00 47.20 P
ATOM 3 OP1 A A1021 -125.870 -83.111 -26.064 1.00 79.89 O
ATOM 4 OP2 A A1021 -126.317 -85.635 -26.245 1.00 79.89 O
ATOM 5 O5' A A1021 -124.031 -84.745 -25.766 1.00 12.09 O
ATOM 6 C5' A A1021 -123.409 -84.639 -27.037 1.00 12.09 C
ATOM 7 C4' A A1021 -121.942 -84.864 -26.886 1.00 12.09 C
ATOM 8 O4' A A1021 -121.769 -85.944 -25.940 1.00 12.09 O
ATOM 9 C3' A A1021 -121.208 -85.256 -28.168 1.00 12.09 C
ATOM 10 O3' A A1021 -119.902 -84.670 -28.196 1.00 12.09 O
ATOM 11 C2' A A1021 -121.107 -86.778 -28.055 1.00 12.09 C
ATOM 12 O2' A A1021 -119.959 -87.307 -28.702 1.00 12.09 O
ATOM 13 C1' A A1021 -121.014 -86.971 -26.542 1.00 12.09 C
ATOM 14 N9 A A1021 -121.517 -88.254 -26.063 1.00 46.39 N
ATOM 15 C8 A A1021 -122.718 -88.531 -25.457 1.00 46.39 C
ATOM 16 N7 A A1021 -122.850 -89.785 -25.098 1.00 46.39 N
ATOM 17 C5 A A1021 -121.658 -90.377 -25.508 1.00 46.39 C
ATOM 18 C6 A A1021 -121.165 -91.701 -25.416 1.00 46.39 C
ATOM 19 N6 A A1021 -121.838 -92.715 -24.851 1.00 46.39 N
ATOM 20 N1 A A1021 -119.940 -91.949 -25.930 1.00 46.39 N
ATOM 21 C2 A A1021 -119.264 -90.942 -26.495 1.00 46.39 C
ATOM 22 N3 A A1021 -119.614 -89.666 -26.638 1.00 46.39 N
ATOM 23 C4 A A1021 -120.836 -89.447 -26.116 1.00 46.39 C
ATOM 24 P A A1022 -119.617 -83.385 -29.129 1.00 57.96 P
ATOM 25 OP1 A A1022 -120.912 -82.847 -29.640 1.00 42.55 O
ATOM 26 OP2 A A1022 -118.529 -83.735 -30.085 1.00 42.62 O
ATOM 27 O5' A A1022 -119.051 -82.302 -28.112 1.00 47.00 O
TER
ATOM 1 O3' U B1089 -119.948 -95.461 -24.154 1.00 30.94 O
ATOM 2 P U B1090 -120.791 -96.477 -25.082 1.00 25.85 P
ATOM 3 OP1 U B1090 -120.404 -97.868 -24.725 1.00 72.32 O
ATOM 4 OP2 U B1090 -120.651 -96.016 -26.490 1.00 72.31 O
ATOM 5 O5' U B1090 -122.305 -96.250 -24.655 1.00 57.55 O
ATOM 6 C5' U B1090 -122.684 -96.140 -23.272 1.00 57.55 C
ATOM 7 C4' U B1090 -123.731 -97.180 -22.926 1.00 57.55 C
ATOM 8 O4' U B1090 -124.528 -97.460 -24.115 1.00 57.55 O
ATOM 9 C3' U B1090 -123.221 -98.549 -22.497 1.00 57.55 C
ATOM 10 O3' U B1090 -122.889 -98.608 -21.112 1.00 57.55 O
ATOM 11 C2' U B1090 -124.400 -99.451 -22.842 1.00 57.55 C
ATOM 12 O2' U B1090 -125.431 -99.375 -21.876 1.00 57.55 O
ATOM 13 C1' U B1090 -124.888 -98.830 -24.150 1.00 57.55 C
ATOM 14 N1 U B1090 -124.224 -99.457 -25.304 1.00 67.50 N
ATOM 15 C2 U B1090 -124.974-100.269 -26.126 1.00 67.80 C
ATOM 16 O2 U B1090 -126.172-100.444 -25.970 1.00 67.88 O
ATOM 17 N3 U B1090 -124.266-100.871 -27.144 1.00 68.06 N
ATOM 18 C4 U B1090 -122.909-100.737 -27.417 1.00 67.92 C
ATOM 19 O4 U B1090 -122.394-101.386 -28.334 1.00 67.88 O
ATOM 20 C5 U B1090 -122.218 -99.858 -26.537 1.00 67.94 C
ATOM 21 C6 U B1090 -122.879 -99.262 -25.541 1.00 67.68 C
ATOM 22 P A B1091 -122.108 -99.895 -20.533 1.00107.11 P
ATOM 23 OP1 A B1091 -122.672-101.133 -21.142 1.00 67.86 O
ATOM 24 OP2 A B1091 -122.106 -99.734 -19.054 1.00 67.86 O
ATOM 25 O5' A B1091 -120.613 -99.779 -21.079 1.00 27.84 O
TER
Atoms:
OP1: (-125.870,-83.111,-26.064)
OP2: (-126.317,-85.635,-26.245)
C3': (-121.208,-85.256,-28.168)
C1': (-121.014,-86.971,-26.542)
C5': (-123.409,-84.639,-27.037)
O4': (-121.769,-85.944,-25.940)
C8: (-122.718,-88.531,-25.457)
O2': (-119.959,-87.307,-28.702)
C6: (-121.165,-91.701,-25.416)
C5: (-121.658,-90.377,-25.508)
C4: (-120.836,-89.447,-26.116)
P: (-125.591,-84.497,-25.615)
C4': (-121.942,-84.864,-26.886)
C2': (-121.107,-86.778,-28.055)
C2: (-119.264,-90.942,-26.495)
N1: (-119.940,-91.949,-25.930)
N3: (-119.614,-89.666,-26.638)
N6: (-121.838,-92.715,-24.851)
N7: (-122.850,-89.785,-25.098)
N9: (-121.517,-88.254,-26.063)
O5': (-124.031,-84.745,-25.766)
O3': (-119.902,-84.670,-28.196)
OP2: (-126.317,-85.635,-26.245)
C3': (-121.208,-85.256,-28.168)
C1': (-121.014,-86.971,-26.542)
C5': (-123.409,-84.639,-27.037)
O4': (-121.769,-85.944,-25.940)
C8: (-122.718,-88.531,-25.457)
O2': (-119.959,-87.307,-28.702)
C6: (-121.165,-91.701,-25.416)
C5: (-121.658,-90.377,-25.508)
C4: (-120.836,-89.447,-26.116)
P: (-125.591,-84.497,-25.615)
C4': (-121.942,-84.864,-26.886)
C2': (-121.107,-86.778,-28.055)
C2: (-119.264,-90.942,-26.495)
N1: (-119.940,-91.949,-25.930)
N3: (-119.614,-89.666,-26.638)
N6: (-121.838,-92.715,-24.851)
N7: (-122.850,-89.785,-25.098)
N9: (-121.517,-88.254,-26.063)
O5': (-124.031,-84.745,-25.766)
O3': (-119.902,-84.670,-28.196)
C4: (-122.909,-100.737,-27.417)
N3: (-124.266,-100.871,-27.144)
OP1: (-120.404,-97.868,-24.725)
OP2: (-120.651,-96.016,-26.490)
C2: (-124.974,-100.269,-26.126)
C1': (-124.888,-98.830,-24.150)
C3': (-123.221,-98.549,-22.497)
O5': (-122.305,-96.250,-24.655)
O4': (-124.528,-97.460,-24.115)
C5': (-122.684,-96.140,-23.272)
P: (-120.791,-96.477,-25.082)
C4': (-123.731,-97.180,-22.926)
C2': (-124.400,-99.451,-22.842)
O2': (-125.431,-99.375,-21.876)
N1: (-124.224,-99.457,-25.304)
O4: (-122.394,-101.386,-28.334)
O2: (-126.172,-100.444,-25.970)
C6: (-122.879,-99.262,-25.541)
C5: (-122.218,-99.858,-26.537)
O3': (-122.889,-98.608,-21.112)
N3: (-124.266,-100.871,-27.144)
OP1: (-120.404,-97.868,-24.725)
OP2: (-120.651,-96.016,-26.490)
C2: (-124.974,-100.269,-26.126)
C1': (-124.888,-98.830,-24.150)
C3': (-123.221,-98.549,-22.497)
O5': (-122.305,-96.250,-24.655)
O4': (-124.528,-97.460,-24.115)
C5': (-122.684,-96.140,-23.272)
P: (-120.791,-96.477,-25.082)
C4': (-123.731,-97.180,-22.926)
C2': (-124.400,-99.451,-22.842)
O2': (-125.431,-99.375,-21.876)
N1: (-124.224,-99.457,-25.304)
O4: (-122.394,-101.386,-28.334)
O2: (-126.172,-100.444,-25.970)
C6: (-122.879,-99.262,-25.541)
C5: (-122.218,-99.858,-26.537)
O3': (-122.889,-98.608,-21.112)
Image (generated by PyMOL):