ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OZB:C19:C16

Extra

PDB:
ATOM 1 O3' U A 18 -22.969 -36.047 12.499 1.00 70.36 O
ATOM 2 P A A 19 -22.592 -36.694 13.928 1.00 64.69 P
ATOM 3 OP1 A A 19 -22.806 -38.152 13.819 1.00 63.26 O
ATOM 4 OP2 A A 19 -23.147 -35.922 15.064 1.00 63.80 O
ATOM 5 O5' A A 19 -21.024 -36.410 13.898 1.00 61.80 O
ATOM 6 C5' A A 19 -20.171 -37.077 12.992 1.00 57.80 C
ATOM 7 C4' A A 19 -18.768 -36.932 13.522 1.00 55.79 C
ATOM 8 O4' A A 19 -18.404 -35.520 13.492 1.00 55.41 O
ATOM 9 C3' A A 19 -18.630 -37.400 14.961 1.00 54.77 C
ATOM 10 O3' A A 19 -17.402 -38.054 15.191 1.00 58.26 O
ATOM 11 C2' A A 19 -18.636 -36.074 15.702 1.00 52.57 C
ATOM 12 O2' A A 19 -18.004 -36.132 16.954 1.00 52.21 O
ATOM 13 C1' A A 19 -17.922 -35.114 14.748 1.00 50.07 C
ATOM 14 N9 A A 19 -18.433 -33.793 15.058 1.00 48.98 N
ATOM 15 C8 A A 19 -19.664 -33.323 14.685 1.00 47.56 C
ATOM 16 N7 A A 19 -19.925 -32.127 15.131 1.00 47.24 N
ATOM 17 C5 A A 19 -18.804 -31.796 15.865 1.00 47.59 C
ATOM 18 C6 A A 19 -18.482 -30.638 16.591 1.00 47.78 C
ATOM 19 N6 A A 19 -19.332 -29.611 16.663 1.00 47.66 N
ATOM 20 N1 A A 19 -17.272 -30.580 17.210 1.00 48.37 N
ATOM 21 C2 A A 19 -16.444 -31.646 17.108 1.00 48.36 C
ATOM 22 N3 A A 19 -16.646 -32.794 16.445 1.00 47.40 N
ATOM 23 C4 A A 19 -17.858 -32.809 15.842 1.00 48.05 C
ATOM 24 P U A 20 -17.024 -39.484 14.600 1.00 58.59 P
ATOM 25 OP1 U A 20 -17.790 -39.737 13.354 1.00 58.61 O
ATOM 26 OP2 U A 20 -17.124 -40.447 15.704 1.00 60.71 O
ATOM 27 O5' U A 20 -15.466 -39.285 14.280 1.00 59.51 O
TER

ATOM 1 O3' G B 15 -19.568 -25.379 18.513 1.00 57.71 O
ATOM 2 P U B 16 -19.969 -26.554 19.508 1.00 60.78 P
ATOM 3 OP1 U B 16 -19.648 -26.148 20.887 1.00 59.87 O
ATOM 4 OP2 U B 16 -19.389 -27.817 19.003 1.00 60.38 O
ATOM 5 O5' U B 16 -21.571 -26.503 19.292 1.00 63.47 O
ATOM 6 C5' U B 16 -22.442 -27.259 20.119 1.00 68.19 C
ATOM 7 C4' U B 16 -23.884 -27.221 19.633 1.00 72.17 C
ATOM 8 O4' U B 16 -24.362 -25.882 19.328 1.00 73.49 O
ATOM 9 C3' U B 16 -24.216 -27.937 18.330 1.00 73.00 C
ATOM 10 O3' U B 16 -24.109 -29.347 18.469 1.00 74.16 O
ATOM 11 C2' U B 16 -25.668 -27.504 18.193 1.00 73.28 C
ATOM 12 O2' U B 16 -26.515 -28.238 19.055 1.00 74.66 O
ATOM 13 C1' U B 16 -25.609 -26.053 18.669 1.00 73.23 C
ATOM 14 N1 U B 16 -25.753 -25.049 17.575 1.00 73.07 N
ATOM 15 C2 U B 16 -27.008 -24.824 17.016 1.00 72.59 C
ATOM 16 O2 U B 16 -28.025 -25.399 17.346 1.00 72.18 O
ATOM 17 N3 U B 16 -27.032 -23.878 16.025 1.00 72.74 N
ATOM 18 C4 U B 16 -25.953 -23.144 15.549 1.00 73.23 C
ATOM 19 O4 U B 16 -26.143 -22.329 14.654 1.00 72.91 O
ATOM 20 C5 U B 16 -24.676 -23.426 16.177 1.00 73.05 C
ATOM 21 C6 U B 16 -24.628 -24.352 17.149 1.00 73.19 C
ATOM 22 P U B 17 -23.665 -30.275 17.240 1.00 73.94 P
ATOM 23 OP1 U B 17 -23.575 -31.677 17.733 1.00 73.49 O
ATOM 24 OP2 U B 17 -22.480 -29.630 16.634 1.00 73.77 O
ATOM 25 O5' U B 17 -24.865 -30.132 16.178 1.00 74.97 O
TER

Atoms:
OP1: (-22.806,-38.152,13.819)
OP2: (-23.147,-35.922,15.064)
C3': (-18.630,-37.400,14.961)
C1': (-17.922,-35.114,14.748)
C5': (-20.171,-37.077,12.992)
O4': (-18.404,-35.520,13.492)
C8: (-19.664,-33.323,14.685)
O2': (-18.004,-36.132,16.954)
C6: (-18.482,-30.638,16.591)
C5: (-18.804,-31.796,15.865)
C4: (-17.858,-32.809,15.842)
P: (-22.592,-36.694,13.928)
C4': (-18.768,-36.932,13.522)
C2': (-18.636,-36.074,15.702)
C2: (-16.444,-31.646,17.108)
N1: (-17.272,-30.580,17.210)
N3: (-16.646,-32.794,16.445)
N6: (-19.332,-29.611,16.663)
N7: (-19.925,-32.127,15.131)
N9: (-18.433,-33.793,15.058)
O5': (-21.024,-36.410,13.898)
O3': (-17.402,-38.054,15.191)
C4: (-25.953,-23.144,15.549)
N3: (-27.032,-23.878,16.025)
OP1: (-19.648,-26.148,20.887)
OP2: (-19.389,-27.817,19.003)
C2: (-27.008,-24.824,17.016)
C1': (-25.609,-26.053,18.669)
C3': (-24.216,-27.937,18.330)
O5': (-21.571,-26.503,19.292)
O4': (-24.362,-25.882,19.328)
C5': (-22.442,-27.259,20.119)
P: (-19.969,-26.554,19.508)
C4': (-23.884,-27.221,19.633)
C2': (-25.668,-27.504,18.193)
O2': (-26.515,-28.238,19.055)
N1: (-25.753,-25.049,17.575)
O4: (-26.143,-22.329,14.654)
O2: (-28.025,-25.399,17.346)
C6: (-24.628,-24.352,17.149)
C5: (-24.676,-23.426,16.177)
O3': (-24.109,-29.347,18.469)
Image (generated by PyMOL):
PyMOL image
show in jmol