Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A479:A504
Extra
PDB:
ATOM 1 O3' A A 478 -23.748 -99.639 37.493 1.00 0.01 O
ATOM 2 P A A 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 3 OP1 A A 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 4 OP2 A A 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 5 O5' A A 479 -23.348-102.063 37.820 1.00 0.01 O
ATOM 6 C5' A A 479 -22.505-103.184 37.776 1.00 0.01 C
ATOM 7 C4' A A 479 -23.087-104.307 36.977 1.00 0.01 C
ATOM 8 O4' A A 479 -24.289-104.788 37.593 1.00 0.01 O
ATOM 9 C3' A A 479 -23.543-104.006 35.578 1.00 0.01 C
ATOM 10 O3' A A 479 -22.486-103.783 34.671 1.00 0.01 O
ATOM 11 C2' A A 479 -24.356-105.252 35.278 1.00 0.01 C
ATOM 12 O2' A A 479 -23.511-106.369 35.028 1.00 0.01 O
ATOM 13 C1' A A 479 -25.046-105.475 36.621 1.00 0.01 C
ATOM 14 N9 A A 479 -26.435-104.977 36.634 1.00 0.01 N
ATOM 15 C8 A A 479 -27.001-104.147 37.526 1.00 0.01 C
ATOM 16 N7 A A 479 -28.251-103.903 37.293 1.00 0.01 N
ATOM 17 C5 A A 479 -28.543-104.608 36.165 1.00 0.01 C
ATOM 18 C6 A A 479 -29.717-104.742 35.422 1.00 0.01 C
ATOM 19 N6 A A 479 -30.877-104.144 35.710 1.00 0.01 N
ATOM 20 N1 A A 479 -29.679-105.539 34.356 1.00 0.01 N
ATOM 21 C2 A A 479 -28.533-106.134 34.058 1.00 0.01 C
ATOM 22 N3 A A 479 -27.380-106.085 34.699 1.00 0.01 N
ATOM 23 C4 A A 479 -27.442-105.289 35.762 1.00 0.01 C
ATOM 24 P G A 480 -22.780-103.093 33.250 1.00 0.01 P
ATOM 25 OP1 G A 480 -24.035-103.647 32.736 1.00 0.01 O
ATOM 26 OP2 G A 480 -21.579-103.229 32.457 1.00 0.01 O
ATOM 27 O5' G A 480 -22.992-101.577 33.612 1.00 0.01 O
TER
ATOM 1 O3' A B 503 -40.167-107.481 26.509 1.00 27.93 O
ATOM 2 P A B 504 -39.424-106.755 27.718 1.00 0.01 P
ATOM 3 OP1 A B 504 -38.113-107.439 27.857 1.00 0.01 O
ATOM 4 OP2 A B 504 -40.367-106.755 28.882 1.00 0.01 O
ATOM 5 O5' A B 504 -39.207-105.261 27.187 1.00 0.01 O
ATOM 6 C5' A B 504 -37.920-104.659 27.205 1.00 0.01 C
ATOM 7 C4' A B 504 -37.796-103.633 28.302 1.00 0.01 C
ATOM 8 O4' A B 504 -37.697-104.293 29.572 1.00 0.01 O
ATOM 9 C3' A B 504 -36.559-102.747 28.248 1.00 0.01 C
ATOM 10 O3' A B 504 -36.730-101.639 27.395 1.00 0.01 O
ATOM 11 C2' A B 504 -36.361-102.346 29.700 1.00 0.01 C
ATOM 12 O2' A B 504 -37.220-101.283 30.040 1.00 0.01 O
ATOM 13 C1' A B 504 -36.833-103.578 30.431 1.00 0.01 C
ATOM 14 N9 A B 504 -35.728-104.467 30.845 1.00 0.01 N
ATOM 15 C8 A B 504 -35.621-105.776 30.484 1.00 0.01 C
ATOM 16 N7 A B 504 -34.614-106.399 31.019 1.00 0.01 N
ATOM 17 C5 A B 504 -33.998-105.459 31.798 1.00 0.01 C
ATOM 18 C6 A B 504 -32.870-105.539 32.606 1.00 0.01 C
ATOM 19 N6 A B 504 -32.138-106.633 32.764 1.00 0.01 N
ATOM 20 N1 A B 504 -32.510-104.439 33.259 1.00 0.01 N
ATOM 21 C2 A B 504 -33.237-103.344 33.096 1.00 0.01 C
ATOM 22 N3 A B 504 -34.326-103.147 32.363 1.00 0.01 N
ATOM 23 C4 A B 504 -34.672-104.263 31.715 1.00 0.01 C
ATOM 24 P G B 505 -35.943-101.545 26.014 1.00 0.01 P
ATOM 25 OP1 G B 505 -36.564-100.443 25.255 1.00 0.01 O
ATOM 26 OP2 G B 505 -35.903-102.899 25.411 1.00 0.01 O
ATOM 27 O5' G B 505 -34.511-101.122 26.483 1.00 0.01 O
TER
ATOM 2 P A A 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 3 OP1 A A 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 4 OP2 A A 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 5 O5' A A 479 -23.348-102.063 37.820 1.00 0.01 O
ATOM 6 C5' A A 479 -22.505-103.184 37.776 1.00 0.01 C
ATOM 7 C4' A A 479 -23.087-104.307 36.977 1.00 0.01 C
ATOM 8 O4' A A 479 -24.289-104.788 37.593 1.00 0.01 O
ATOM 9 C3' A A 479 -23.543-104.006 35.578 1.00 0.01 C
ATOM 10 O3' A A 479 -22.486-103.783 34.671 1.00 0.01 O
ATOM 11 C2' A A 479 -24.356-105.252 35.278 1.00 0.01 C
ATOM 12 O2' A A 479 -23.511-106.369 35.028 1.00 0.01 O
ATOM 13 C1' A A 479 -25.046-105.475 36.621 1.00 0.01 C
ATOM 14 N9 A A 479 -26.435-104.977 36.634 1.00 0.01 N
ATOM 15 C8 A A 479 -27.001-104.147 37.526 1.00 0.01 C
ATOM 16 N7 A A 479 -28.251-103.903 37.293 1.00 0.01 N
ATOM 17 C5 A A 479 -28.543-104.608 36.165 1.00 0.01 C
ATOM 18 C6 A A 479 -29.717-104.742 35.422 1.00 0.01 C
ATOM 19 N6 A A 479 -30.877-104.144 35.710 1.00 0.01 N
ATOM 20 N1 A A 479 -29.679-105.539 34.356 1.00 0.01 N
ATOM 21 C2 A A 479 -28.533-106.134 34.058 1.00 0.01 C
ATOM 22 N3 A A 479 -27.380-106.085 34.699 1.00 0.01 N
ATOM 23 C4 A A 479 -27.442-105.289 35.762 1.00 0.01 C
ATOM 24 P G A 480 -22.780-103.093 33.250 1.00 0.01 P
ATOM 25 OP1 G A 480 -24.035-103.647 32.736 1.00 0.01 O
ATOM 26 OP2 G A 480 -21.579-103.229 32.457 1.00 0.01 O
ATOM 27 O5' G A 480 -22.992-101.577 33.612 1.00 0.01 O
TER
ATOM 1 O3' A B 503 -40.167-107.481 26.509 1.00 27.93 O
ATOM 2 P A B 504 -39.424-106.755 27.718 1.00 0.01 P
ATOM 3 OP1 A B 504 -38.113-107.439 27.857 1.00 0.01 O
ATOM 4 OP2 A B 504 -40.367-106.755 28.882 1.00 0.01 O
ATOM 5 O5' A B 504 -39.207-105.261 27.187 1.00 0.01 O
ATOM 6 C5' A B 504 -37.920-104.659 27.205 1.00 0.01 C
ATOM 7 C4' A B 504 -37.796-103.633 28.302 1.00 0.01 C
ATOM 8 O4' A B 504 -37.697-104.293 29.572 1.00 0.01 O
ATOM 9 C3' A B 504 -36.559-102.747 28.248 1.00 0.01 C
ATOM 10 O3' A B 504 -36.730-101.639 27.395 1.00 0.01 O
ATOM 11 C2' A B 504 -36.361-102.346 29.700 1.00 0.01 C
ATOM 12 O2' A B 504 -37.220-101.283 30.040 1.00 0.01 O
ATOM 13 C1' A B 504 -36.833-103.578 30.431 1.00 0.01 C
ATOM 14 N9 A B 504 -35.728-104.467 30.845 1.00 0.01 N
ATOM 15 C8 A B 504 -35.621-105.776 30.484 1.00 0.01 C
ATOM 16 N7 A B 504 -34.614-106.399 31.019 1.00 0.01 N
ATOM 17 C5 A B 504 -33.998-105.459 31.798 1.00 0.01 C
ATOM 18 C6 A B 504 -32.870-105.539 32.606 1.00 0.01 C
ATOM 19 N6 A B 504 -32.138-106.633 32.764 1.00 0.01 N
ATOM 20 N1 A B 504 -32.510-104.439 33.259 1.00 0.01 N
ATOM 21 C2 A B 504 -33.237-103.344 33.096 1.00 0.01 C
ATOM 22 N3 A B 504 -34.326-103.147 32.363 1.00 0.01 N
ATOM 23 C4 A B 504 -34.672-104.263 31.715 1.00 0.01 C
ATOM 24 P G B 505 -35.943-101.545 26.014 1.00 0.01 P
ATOM 25 OP1 G B 505 -36.564-100.443 25.255 1.00 0.01 O
ATOM 26 OP2 G B 505 -35.903-102.899 25.411 1.00 0.01 O
ATOM 27 O5' G B 505 -34.511-101.122 26.483 1.00 0.01 O
TER
Atoms:
OP1: (-22.900,-100.442,39.669)
OP2: (-21.434,-100.451,37.615)
C3': (-23.543,-104.006,35.578)
C1': (-25.046,-105.475,36.621)
C5': (-22.505,-103.184,37.776)
O4': (-24.289,-104.788,37.593)
C8: (-27.001,-104.147,37.526)
O2': (-23.511,-106.369,35.028)
C6: (-29.717,-104.742,35.422)
C5: (-28.543,-104.608,36.165)
C4: (-27.442,-105.289,35.762)
P: (-22.759,-100.646,38.229)
C4': (-23.087,-104.307,36.977)
C2': (-24.356,-105.252,35.278)
C2: (-28.533,-106.134,34.058)
N1: (-29.679,-105.539,34.356)
N3: (-27.380,-106.085,34.699)
N6: (-30.877,-104.144,35.710)
N7: (-28.251,-103.903,37.293)
N9: (-26.435,-104.977,36.634)
O5': (-23.348,-102.063,37.820)
O3': (-22.486,-103.783,34.671)
OP2: (-21.434,-100.451,37.615)
C3': (-23.543,-104.006,35.578)
C1': (-25.046,-105.475,36.621)
C5': (-22.505,-103.184,37.776)
O4': (-24.289,-104.788,37.593)
C8: (-27.001,-104.147,37.526)
O2': (-23.511,-106.369,35.028)
C6: (-29.717,-104.742,35.422)
C5: (-28.543,-104.608,36.165)
C4: (-27.442,-105.289,35.762)
P: (-22.759,-100.646,38.229)
C4': (-23.087,-104.307,36.977)
C2': (-24.356,-105.252,35.278)
C2: (-28.533,-106.134,34.058)
N1: (-29.679,-105.539,34.356)
N3: (-27.380,-106.085,34.699)
N6: (-30.877,-104.144,35.710)
N7: (-28.251,-103.903,37.293)
N9: (-26.435,-104.977,36.634)
O5': (-23.348,-102.063,37.820)
O3': (-22.486,-103.783,34.671)
OP1: (-38.113,-107.439,27.857)
OP2: (-40.367,-106.755,28.882)
C3': (-36.559,-102.747,28.248)
C1': (-36.833,-103.578,30.431)
C5': (-37.920,-104.659,27.205)
O4': (-37.697,-104.293,29.572)
C8: (-35.621,-105.776,30.484)
O2': (-37.220,-101.283,30.040)
C6: (-32.870,-105.539,32.606)
C5: (-33.998,-105.459,31.798)
C4: (-34.672,-104.263,31.715)
P: (-39.424,-106.755,27.718)
C4': (-37.796,-103.633,28.302)
C2': (-36.361,-102.346,29.700)
C2: (-33.237,-103.344,33.096)
N1: (-32.510,-104.439,33.259)
N3: (-34.326,-103.147,32.363)
N6: (-32.138,-106.633,32.764)
N7: (-34.614,-106.399,31.019)
N9: (-35.728,-104.467,30.845)
O5': (-39.207,-105.261,27.187)
O3': (-36.730,-101.639,27.395)
OP2: (-40.367,-106.755,28.882)
C3': (-36.559,-102.747,28.248)
C1': (-36.833,-103.578,30.431)
C5': (-37.920,-104.659,27.205)
O4': (-37.697,-104.293,29.572)
C8: (-35.621,-105.776,30.484)
O2': (-37.220,-101.283,30.040)
C6: (-32.870,-105.539,32.606)
C5: (-33.998,-105.459,31.798)
C4: (-34.672,-104.263,31.715)
P: (-39.424,-106.755,27.718)
C4': (-37.796,-103.633,28.302)
C2': (-36.361,-102.346,29.700)
C2: (-33.237,-103.344,33.096)
N1: (-32.510,-104.439,33.259)
N3: (-34.326,-103.147,32.363)
N6: (-32.138,-106.633,32.764)
N7: (-34.614,-106.399,31.019)
N9: (-35.728,-104.467,30.845)
O5': (-39.207,-105.261,27.187)
O3': (-36.730,-101.639,27.395)
Image (generated by PyMOL):