ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A768:A1470

Extra

PDB:
ATOM 1 O3' U A 767 211.440 100.043 -29.369 1.00 39.26 O
ATOM 2 P A A 768 212.813 99.667 -28.619 1.00 39.44 P
ATOM 3 OP1 A A 768 212.993 100.672 -27.523 1.00 40.58 O
ATOM 4 OP2 A A 768 213.887 99.523 -29.633 1.00 40.20 O
ATOM 5 O5' A A 768 212.511 98.241 -27.973 1.00 36.08 O
ATOM 6 C5' A A 768 213.583 97.412 -27.525 1.00 37.09 C
ATOM 7 C4' A A 768 213.053 96.111 -26.992 1.00 37.59 C
ATOM 8 O4' A A 768 212.283 96.364 -25.796 1.00 38.79 O
ATOM 9 C3' A A 768 212.127 95.364 -27.933 1.00 37.75 C
ATOM 10 O3' A A 768 212.892 94.508 -28.740 1.00 37.86 O
ATOM 11 C2' A A 768 211.243 94.569 -26.978 1.00 38.75 C
ATOM 12 O2' A A 768 211.832 93.349 -26.581 1.00 37.06 O
ATOM 13 C1' A A 768 211.149 95.516 -25.774 1.00 39.80 C
ATOM 14 N9 A A 768 209.959 96.370 -25.798 1.00 40.36 N
ATOM 15 C8 A A 768 209.858 97.654 -26.288 1.00 41.31 C
ATOM 16 N7 A A 768 208.666 98.179 -26.159 1.00 41.54 N
ATOM 17 C5 A A 768 207.931 97.177 -25.540 1.00 42.51 C
ATOM 18 C6 A A 768 206.595 97.116 -25.110 1.00 41.74 C
ATOM 19 N6 A A 768 205.738 98.136 -25.215 1.00 40.61 N
ATOM 20 N1 A A 768 206.169 95.964 -24.551 1.00 41.95 N
ATOM 21 C2 A A 768 207.041 94.954 -24.417 1.00 42.76 C
ATOM 22 N3 A A 768 208.327 94.897 -24.760 1.00 42.77 N
ATOM 23 C4 A A 768 208.713 96.053 -25.324 1.00 41.29 C
ATOM 24 P G A 769 212.578 94.380 -30.308 1.00 37.60 P
ATOM 25 OP1 G A 769 213.675 93.506 -30.842 1.00 37.36 O
ATOM 26 OP2 G A 769 212.358 95.736 -30.892 1.00 36.17 O
ATOM 27 O5' G A 769 211.244 93.527 -30.350 1.00 36.79 O
TER

ATOM 1 O3' G B1469 202.377 95.795 -25.083 1.00 27.71 O
ATOM 2 P U B1470 202.246 97.391 -25.116 1.00 29.27 P
ATOM 3 OP1 U B1470 202.707 97.921 -26.439 1.00 29.26 O
ATOM 4 OP2 U B1470 202.853 97.927 -23.882 1.00 29.61 O
ATOM 5 O5' U B1470 200.682 97.627 -25.068 1.00 31.17 O
ATOM 6 C5' U B1470 199.792 96.999 -26.016 1.00 30.67 C
ATOM 7 C4' U B1470 198.381 97.503 -25.806 1.00 30.68 C
ATOM 8 O4' U B1470 197.932 97.177 -24.463 1.00 32.55 O
ATOM 9 C3' U B1470 198.285 99.004 -25.885 1.00 29.54 C
ATOM 10 O3' U B1470 198.114 99.646 -27.136 1.00 28.11 O
ATOM 11 C2' U B1470 198.306 99.520 -24.446 1.00 29.50 C
ATOM 12 O2' U B1470 197.596 100.711 -24.206 1.00 30.88 O
ATOM 13 C1' U B1470 197.618 98.359 -23.739 1.00 30.72 C
ATOM 14 N1 U B1470 197.953 98.108 -22.330 1.00 31.24 N
ATOM 15 C2 U B1470 196.991 98.405 -21.373 1.00 32.34 C
ATOM 16 O2 U B1470 195.946 98.974 -21.638 1.00 31.96 O
ATOM 17 N3 U B1470 197.309 98.018 -20.089 1.00 32.75 N
ATOM 18 C4 U B1470 198.481 97.410 -19.674 1.00 32.97 C
ATOM 19 O4 U B1470 198.613 97.085 -18.494 1.00 34.28 O
ATOM 20 C5 U B1470 199.441 97.194 -20.711 1.00 31.43 C
ATOM 21 C6 U B1470 199.153 97.545 -21.969 1.00 31.63 C
ATOM 22 P A B1471 196.693 100.235 -27.549 1.00 27.39 P
ATOM 23 OP1 A B1471 196.867 101.013 -28.826 1.00 25.57 O
ATOM 24 OP2 A B1471 196.136 100.914 -26.348 1.00 30.87 O
ATOM 25 O5' A B1471 195.819 98.958 -27.868 1.00 26.05 O
TER

Atoms:
OP1: (212.993,100.672,-27.523)
OP2: (213.887,99.523,-29.633)
C3': (212.127,95.364,-27.933)
C1': (211.149,95.516,-25.774)
C5': (213.583,97.412,-27.525)
O4': (212.283,96.364,-25.796)
C8: (209.858,97.654,-26.288)
O2': (211.832,93.349,-26.581)
C6: (206.595,97.116,-25.110)
C5: (207.931,97.177,-25.540)
C4: (208.713,96.053,-25.324)
P: (212.813,99.667,-28.619)
C4': (213.053,96.111,-26.992)
C2': (211.243,94.569,-26.978)
C2: (207.041,94.954,-24.417)
N1: (206.169,95.964,-24.551)
N3: (208.327,94.897,-24.760)
N6: (205.738,98.136,-25.215)
N7: (208.666,98.179,-26.159)
N9: (209.959,96.370,-25.798)
O5': (212.511,98.241,-27.973)
O3': (212.892,94.508,-28.740)
C4: (198.481,97.410,-19.674)
N3: (197.309,98.018,-20.089)
OP1: (202.707,97.921,-26.439)
OP2: (202.853,97.927,-23.882)
C2: (196.991,98.405,-21.373)
C1': (197.618,98.359,-23.739)
C3': (198.285,99.004,-25.885)
O5': (200.682,97.627,-25.068)
O4': (197.932,97.177,-24.463)
C5': (199.792,96.999,-26.016)
P: (202.246,97.391,-25.116)
C4': (198.381,97.503,-25.806)
C2': (198.306,99.520,-24.446)
O2': (197.596,100.711,-24.206)
N1: (197.953,98.108,-22.330)
O4: (198.613,97.085,-18.494)
O2: (195.946,98.974,-21.638)
C6: (199.153,97.545,-21.969)
C5: (199.441,97.194,-20.711)
O3': (198.114,99.646,-27.136)
Image (generated by PyMOL):
PyMOL image
show in jmol