ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A794:A791

Extra

PDB:
ATOM 1 O3' A A 793 173.940 105.135 -38.554 1.00 22.97 O
ATOM 2 P A A 794 173.422 104.955 -40.044 1.00 24.33 P
ATOM 3 OP1 A A 794 173.160 106.265 -40.724 1.00 21.79 O
ATOM 4 OP2 A A 794 174.388 103.987 -40.611 1.00 25.18 O
ATOM 5 O5' A A 794 171.970 104.350 -39.790 1.00 24.66 O
ATOM 6 C5' A A 794 171.589 103.062 -40.262 1.00 25.03 C
ATOM 7 C4' A A 794 170.515 103.188 -41.322 1.00 24.15 C
ATOM 8 O4' A A 794 170.489 101.944 -42.044 1.00 25.71 O
ATOM 9 C3' A A 794 169.068 103.438 -40.909 1.00 23.13 C
ATOM 10 O3' A A 794 168.774 104.832 -40.834 1.00 25.05 O
ATOM 11 C2' A A 794 168.301 102.841 -42.076 1.00 22.27 C
ATOM 12 O2' A A 794 168.289 103.731 -43.167 1.00 21.79 O
ATOM 13 C1' A A 794 169.183 101.662 -42.464 1.00 21.91 C
ATOM 14 N9 A A 794 168.817 100.383 -41.872 1.00 22.65 N
ATOM 15 C8 A A 794 168.960 99.949 -40.573 1.00 20.21 C
ATOM 16 N7 A A 794 168.553 98.717 -40.383 1.00 20.72 N
ATOM 17 C5 A A 794 168.106 98.318 -41.637 1.00 21.33 C
ATOM 18 C6 A A 794 167.560 97.120 -42.107 1.00 21.57 C
ATOM 19 N6 A A 794 167.353 96.044 -41.342 1.00 21.85 N
ATOM 20 N1 A A 794 167.230 97.053 -43.415 1.00 23.58 N
ATOM 21 C2 A A 794 167.438 98.129 -44.191 1.00 25.29 C
ATOM 22 N3 A A 794 167.945 99.312 -43.867 1.00 23.55 N
ATOM 23 C4 A A 794 168.263 99.338 -42.561 1.00 22.71 C
ATOM 24 P C A 795 167.494 105.357 -39.990 1.00 25.88 P
ATOM 25 OP1 C A 795 166.382 105.647 -40.949 1.00 24.09 O
ATOM 26 OP2 C A 795 167.276 104.402 -38.860 1.00 24.62 O
ATOM 27 O5' C A 795 168.033 106.738 -39.399 1.00 23.45 O
TER

ATOM 1 O3' C B 790 167.042 90.917 -42.300 1.00 26.34 O
ATOM 2 P U B 791 166.992 92.394 -41.697 1.00 25.92 P
ATOM 3 OP1 U B 791 166.483 92.130 -40.317 1.00 28.97 O
ATOM 4 OP2 U B 791 166.325 93.371 -42.571 1.00 26.98 O
ATOM 5 O5' U B 791 168.480 92.778 -41.571 1.00 27.54 O
ATOM 6 C5' U B 791 169.328 92.093 -40.643 1.00 26.64 C
ATOM 7 C4' U B 791 170.685 92.732 -40.647 1.00 25.51 C
ATOM 8 O4' U B 791 171.148 92.827 -42.017 1.00 25.27 O
ATOM 9 C3' U B 791 170.701 94.166 -40.169 1.00 25.54 C
ATOM 10 O3' U B 791 170.783 94.214 -38.769 1.00 24.07 O
ATOM 11 C2' U B 791 171.941 94.730 -40.845 1.00 25.51 C
ATOM 12 O2' U B 791 173.107 94.328 -40.153 1.00 27.91 O
ATOM 13 C1' U B 791 171.925 93.989 -42.177 1.00 25.03 C
ATOM 14 N1 U B 791 171.397 94.761 -43.306 1.00 24.49 N
ATOM 15 C2 U B 791 172.288 95.555 -44.001 1.00 25.38 C
ATOM 16 O2 U B 791 173.472 95.620 -43.725 1.00 29.01 O
ATOM 17 N3 U B 791 171.751 96.263 -45.040 1.00 23.87 N
ATOM 18 C4 U B 791 170.453 96.246 -45.459 1.00 24.31 C
ATOM 19 O4 U B 791 170.142 96.891 -46.454 1.00 29.10 O
ATOM 20 C5 U B 791 169.588 95.398 -44.700 1.00 24.62 C
ATOM 21 C6 U B 791 170.080 94.702 -43.669 1.00 24.41 C
ATOM 22 P A B 792 170.216 95.495 -38.004 1.00 21.66 P
ATOM 23 OP1 A B 792 168.885 95.769 -38.626 1.00 19.10 O
ATOM 24 OP2 A B 792 170.389 95.279 -36.536 1.00 20.42 O
ATOM 25 O5' A B 792 171.173 96.650 -38.474 1.00 20.63 O
TER

Atoms:
OP1: (173.160,106.265,-40.724)
OP2: (174.388,103.987,-40.611)
C3': (169.068,103.438,-40.909)
C1': (169.183,101.662,-42.464)
C5': (171.589,103.062,-40.262)
O4': (170.489,101.944,-42.044)
C8: (168.960,99.949,-40.573)
O2': (168.289,103.731,-43.167)
C6: (167.560,97.120,-42.107)
C5: (168.106,98.318,-41.637)
C4: (168.263,99.338,-42.561)
P: (173.422,104.955,-40.044)
C4': (170.515,103.188,-41.322)
C2': (168.301,102.841,-42.076)
C2: (167.438,98.129,-44.191)
N1: (167.230,97.053,-43.415)
N3: (167.945,99.312,-43.867)
N6: (167.353,96.044,-41.342)
N7: (168.553,98.717,-40.383)
N9: (168.817,100.383,-41.872)
O5': (171.970,104.350,-39.790)
O3': (168.774,104.832,-40.834)
C4: (170.453,96.246,-45.459)
N3: (171.751,96.263,-45.040)
OP1: (166.483,92.130,-40.317)
OP2: (166.325,93.371,-42.571)
C2: (172.288,95.555,-44.001)
C1': (171.925,93.989,-42.177)
C3': (170.701,94.166,-40.169)
O5': (168.480,92.778,-41.571)
O4': (171.148,92.827,-42.017)
C5': (169.328,92.093,-40.643)
P: (166.992,92.394,-41.697)
C4': (170.685,92.732,-40.647)
C2': (171.941,94.730,-40.845)
O2': (173.107,94.328,-40.153)
N1: (171.397,94.761,-43.306)
O4: (170.142,96.891,-46.454)
O2: (173.472,95.620,-43.725)
C6: (170.080,94.702,-43.669)
C5: (169.588,95.398,-44.700)
O3': (170.783,94.214,-38.769)
Image (generated by PyMOL):
PyMOL image
show in jmol