ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A794:A791

Extra

PDB:
ATOM 1 O3' A A 793 174.258 105.238 -38.408 1.00 52.02 O
ATOM 2 P A A 794 173.774 105.073 -39.913 1.00 53.71 P
ATOM 3 OP1 A A 794 173.679 106.417 -40.563 1.00 55.06 O
ATOM 4 OP2 A A 794 174.626 104.009 -40.503 1.00 53.70 O
ATOM 5 O5' A A 794 172.278 104.601 -39.723 1.00 53.54 O
ATOM 6 C5' A A 794 171.862 103.300 -40.120 1.00 53.07 C
ATOM 7 C4' A A 794 170.831 103.393 -41.224 1.00 51.39 C
ATOM 8 O4' A A 794 170.826 102.130 -41.914 1.00 51.98 O
ATOM 9 C3' A A 794 169.377 103.633 -40.841 1.00 51.32 C
ATOM 10 O3' A A 794 169.053 105.023 -40.737 1.00 52.27 O
ATOM 11 C2' A A 794 168.630 103.007 -42.009 1.00 49.77 C
ATOM 12 O2' A A 794 168.604 103.897 -43.104 1.00 49.70 O
ATOM 13 C1' A A 794 169.533 101.834 -42.367 1.00 49.06 C
ATOM 14 N9 A A 794 169.172 100.539 -41.806 1.00 48.90 N
ATOM 15 C8 A A 794 169.332 100.076 -40.523 1.00 49.44 C
ATOM 16 N7 A A 794 168.917 98.844 -40.348 1.00 48.87 N
ATOM 17 C5 A A 794 168.451 98.474 -41.598 1.00 47.58 C
ATOM 18 C6 A A 794 167.886 97.292 -42.072 1.00 49.03 C
ATOM 19 N6 A A 794 167.666 96.214 -41.307 1.00 49.92 N
ATOM 20 N1 A A 794 167.544 97.242 -43.379 1.00 51.60 N
ATOM 21 C2 A A 794 167.756 98.330 -44.148 1.00 54.27 C
ATOM 22 N3 A A 794 168.275 99.507 -43.812 1.00 52.02 N
ATOM 23 C4 A A 794 168.605 99.510 -42.507 1.00 49.88 C
ATOM 24 P C A 795 167.805 105.488 -39.826 1.00 51.11 P
ATOM 25 OP1 C A 795 166.621 105.739 -40.701 1.00 49.08 O
ATOM 26 OP2 C A 795 167.703 104.498 -38.721 1.00 51.14 O
ATOM 27 O5' C A 795 168.310 106.876 -39.241 1.00 49.35 O
TER

ATOM 1 O3' C B 790 167.451 91.067 -42.088 1.00 55.61 O
ATOM 2 P U B 791 167.244 92.594 -41.654 1.00 56.12 P
ATOM 3 OP1 U B 791 166.522 92.408 -40.370 1.00 58.42 O
ATOM 4 OP2 U B 791 166.692 93.462 -42.704 1.00 56.73 O
ATOM 5 O5' U B 791 168.683 93.083 -41.333 1.00 56.23 O
ATOM 6 C5' U B 791 169.547 92.307 -40.507 1.00 55.69 C
ATOM 7 C4' U B 791 170.933 92.873 -40.573 1.00 55.23 C
ATOM 8 O4' U B 791 171.347 92.965 -41.964 1.00 55.44 O
ATOM 9 C3' U B 791 171.030 94.298 -40.078 1.00 55.55 C
ATOM 10 O3' U B 791 171.167 94.320 -38.681 1.00 55.15 O
ATOM 11 C2' U B 791 172.265 94.823 -40.792 1.00 55.19 C
ATOM 12 O2' U B 791 173.437 94.393 -40.126 1.00 56.42 O
ATOM 13 C1' U B 791 172.179 94.095 -42.134 1.00 54.82 C
ATOM 14 N1 U B 791 171.685 94.901 -43.261 1.00 53.15 N
ATOM 15 C2 U B 791 172.592 95.739 -43.890 1.00 55.26 C
ATOM 16 O2 U B 791 173.758 95.829 -43.545 1.00 60.65 O
ATOM 17 N3 U B 791 172.094 96.459 -44.947 1.00 52.54 N
ATOM 18 C4 U B 791 170.817 96.419 -45.440 1.00 52.85 C
ATOM 19 O4 U B 791 170.561 97.011 -46.488 1.00 54.93 O
ATOM 20 C5 U B 791 169.933 95.542 -44.734 1.00 53.30 C
ATOM 21 C6 U B 791 170.388 94.830 -43.692 1.00 53.52 C
ATOM 22 P A B 792 170.538 95.541 -37.851 1.00 53.70 P
ATOM 23 OP1 A B 792 169.168 95.790 -38.433 1.00 51.65 O
ATOM 24 OP2 A B 792 170.750 95.200 -36.412 1.00 50.29 O
ATOM 25 O5' A B 792 171.436 96.781 -38.267 1.00 51.06 O
TER

Atoms:
OP1: (173.679,106.417,-40.563)
OP2: (174.626,104.009,-40.503)
C3': (169.377,103.633,-40.841)
C1': (169.533,101.834,-42.367)
C5': (171.862,103.300,-40.120)
O4': (170.826,102.130,-41.914)
C8: (169.332,100.076,-40.523)
O2': (168.604,103.897,-43.104)
C6: (167.886,97.292,-42.072)
C5: (168.451,98.474,-41.598)
C4: (168.605,99.510,-42.507)
P: (173.774,105.073,-39.913)
C4': (170.831,103.393,-41.224)
C2': (168.630,103.007,-42.009)
C2: (167.756,98.330,-44.148)
N1: (167.544,97.242,-43.379)
N3: (168.275,99.507,-43.812)
N6: (167.666,96.214,-41.307)
N7: (168.917,98.844,-40.348)
N9: (169.172,100.539,-41.806)
O5': (172.278,104.601,-39.723)
O3': (169.053,105.023,-40.737)
C4: (170.817,96.419,-45.440)
N3: (172.094,96.459,-44.947)
OP1: (166.522,92.408,-40.370)
OP2: (166.692,93.462,-42.704)
C2: (172.592,95.739,-43.890)
C1': (172.179,94.095,-42.134)
C3': (171.030,94.298,-40.078)
O5': (168.683,93.083,-41.333)
O4': (171.347,92.965,-41.964)
C5': (169.547,92.307,-40.507)
P: (167.244,92.594,-41.654)
C4': (170.933,92.873,-40.573)
C2': (172.265,94.823,-40.792)
O2': (173.437,94.393,-40.126)
N1: (171.685,94.901,-43.261)
O4: (170.561,97.011,-46.488)
O2: (173.758,95.829,-43.545)
C6: (170.388,94.830,-43.692)
C5: (169.933,95.542,-44.734)
O3': (171.167,94.320,-38.681)
Image (generated by PyMOL):
PyMOL image
show in jmol