ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCJ:0681:0720

Extra

PDB:
ATOM 1 O3' A A 680 64.873 73.995 45.691 1.00 70.46 O
ATOM 2 P A A 681 63.853 73.521 44.553 1.00 70.60 P
ATOM 3 OP1 A A 681 63.301 74.735 43.907 1.00 70.34 O
ATOM 4 OP2 A A 681 62.938 72.547 45.183 1.00 71.11 O
ATOM 5 O5' A A 681 64.780 72.764 43.505 1.00 70.96 O
ATOM 6 C5' A A 681 65.909 73.432 42.919 1.00 73.48 C
ATOM 7 C4' A A 681 66.837 72.436 42.267 1.00 75.06 C
ATOM 8 O4' A A 681 67.398 71.556 43.272 1.00 75.46 O
ATOM 9 C3' A A 681 66.206 71.501 41.250 1.00 76.52 C
ATOM 10 O3' A A 681 66.094 72.143 39.980 1.00 77.99 O
ATOM 11 C2' A A 681 67.194 70.342 41.242 1.00 77.12 C
ATOM 12 O2' A A 681 68.351 70.633 40.488 1.00 76.52 O
ATOM 13 C1' A A 681 67.578 70.263 42.723 1.00 77.48 C
ATOM 14 N9 A A 681 66.764 69.325 43.501 1.00 79.12 N
ATOM 15 C8 A A 681 65.580 69.580 44.151 1.00 79.30 C
ATOM 16 N7 A A 681 65.080 68.538 44.770 1.00 78.49 N
ATOM 17 C5 A A 681 65.996 67.528 44.514 1.00 79.36 C
ATOM 18 C6 A A 681 66.043 66.175 44.895 1.00 79.84 C
ATOM 19 N6 A A 681 65.114 65.586 45.649 1.00 81.74 N
ATOM 20 N1 A A 681 67.091 65.438 44.469 1.00 79.59 N
ATOM 21 C2 A A 681 68.022 66.027 43.714 1.00 79.44 C
ATOM 22 N3 A A 681 68.092 67.288 43.292 1.00 80.16 N
ATOM 23 C4 A A 681 67.036 67.996 43.731 1.00 79.46 C
ATOM 24 P A A 682 64.970 71.669 38.931 1.00 79.44 P
ATOM 25 OP1 A A 682 65.008 72.605 37.783 1.00 79.06 O
ATOM 26 OP2 A A 682 63.693 71.464 39.654 1.00 79.46 O
ATOM 27 O5' A A 682 65.530 70.275 38.409 1.00 79.57 O
TER

ATOM 1 O3' C B 719 63.709 64.007 47.677 1.00 84.03 O
ATOM 2 P U B 720 64.789 62.831 47.540 1.00 85.59 P
ATOM 3 OP1 U B 720 66.060 63.451 47.081 1.00 84.39 O
ATOM 4 OP2 U B 720 64.173 61.732 46.747 1.00 85.25 O
ATOM 5 O5' U B 720 64.998 62.341 49.041 1.00 87.32 O
ATOM 6 C5' U B 720 65.639 63.196 50.005 1.00 90.46 C
ATOM 7 C4' U B 720 65.486 62.639 51.404 1.00 92.14 C
ATOM 8 O4' U B 720 64.098 62.667 51.813 1.00 91.24 O
ATOM 9 C3' U B 720 65.883 61.190 51.609 1.00 94.37 C
ATOM 10 O3' U B 720 67.285 61.068 51.754 1.00 99.93 O
ATOM 11 C2' U B 720 65.168 60.844 52.906 1.00 92.88 C
ATOM 12 O2' U B 720 65.852 61.304 54.053 1.00 93.88 O
ATOM 13 C1' U B 720 63.868 61.631 52.751 1.00 91.81 C
ATOM 14 N1 U B 720 62.767 60.789 52.273 1.00 92.23 N
ATOM 15 C2 U B 720 62.163 59.978 53.195 1.00 92.60 C
ATOM 16 O2 U B 720 62.489 59.966 54.365 1.00 94.66 O
ATOM 17 N3 U B 720 61.163 59.185 52.703 1.00 92.18 N
ATOM 18 C4 U B 720 60.713 59.132 51.410 1.00 91.77 C
ATOM 19 O4 U B 720 59.840 58.319 51.108 1.00 92.11 O
ATOM 20 C5 U B 720 61.375 60.020 50.514 1.00 92.15 C
ATOM 21 C6 U B 720 62.358 60.799 50.966 1.00 92.65 C
ATOM 22 P U B 721 67.991 59.662 51.469 1.00103.82 P
ATOM 23 OP1 U B 721 69.321 59.719 52.123 1.00104.27 O
ATOM 24 OP2 U B 721 67.894 59.357 50.017 1.00102.78 O
ATOM 25 O5' U B 721 67.106 58.603 52.263 1.00109.40 O
TER

Atoms:
OP1: (63.301,74.735,43.907)
OP2: (62.938,72.547,45.183)
C3': (66.206,71.501,41.250)
C1': (67.578,70.263,42.723)
C5': (65.909,73.432,42.919)
O4': (67.398,71.556,43.272)
C8: (65.580,69.580,44.151)
O2': (68.351,70.633,40.488)
C6: (66.043,66.175,44.895)
C5: (65.996,67.528,44.514)
C4: (67.036,67.996,43.731)
P: (63.853,73.521,44.553)
C4': (66.837,72.436,42.267)
C2': (67.194,70.342,41.242)
C2: (68.022,66.027,43.714)
N1: (67.091,65.438,44.469)
N3: (68.092,67.288,43.292)
N6: (65.114,65.586,45.649)
N7: (65.080,68.538,44.770)
N9: (66.764,69.325,43.501)
O5': (64.780,72.764,43.505)
O3': (66.094,72.143,39.980)
C4: (60.713,59.132,51.410)
N3: (61.163,59.185,52.703)
OP1: (66.060,63.451,47.081)
OP2: (64.173,61.732,46.747)
C2: (62.163,59.978,53.195)
C1': (63.868,61.631,52.751)
C3': (65.883,61.190,51.609)
O5': (64.998,62.341,49.041)
O4': (64.098,62.667,51.813)
C5': (65.639,63.196,50.005)
P: (64.789,62.831,47.540)
C4': (65.486,62.639,51.404)
C2': (65.168,60.844,52.906)
O2': (65.852,61.304,54.053)
N1: (62.767,60.789,52.273)
O4: (59.840,58.319,51.108)
O2: (62.489,59.966,54.365)
C6: (62.358,60.799,50.966)
C5: (61.375,60.020,50.514)
O3': (67.285,61.068,51.754)
Image (generated by PyMOL):
PyMOL image
show in jmol