ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CXC:0681:0720

Extra

PDB:
ATOM 1 O3' A A 680 65.573 74.761 46.013 1.00 63.80 O
ATOM 2 P A A 681 64.565 74.297 44.852 1.00 66.07 P
ATOM 3 OP1 A A 681 64.007 75.516 44.199 1.00 63.85 O
ATOM 4 OP2 A A 681 63.638 73.280 45.424 1.00 64.91 O
ATOM 5 O5' A A 681 65.527 73.605 43.794 1.00 65.03 O
ATOM 6 C5' A A 681 66.507 74.385 43.098 1.00 65.72 C
ATOM 7 C4' A A 681 67.521 73.489 42.442 1.00 65.41 C
ATOM 8 O4' A A 681 68.160 72.667 43.449 1.00 66.43 O
ATOM 9 C3' A A 681 66.970 72.501 41.436 1.00 65.31 C
ATOM 10 O3' A A 681 66.839 73.100 40.158 1.00 66.53 O
ATOM 11 C2' A A 681 68.032 71.412 41.442 1.00 66.41 C
ATOM 12 O2' A A 681 69.151 71.767 40.652 1.00 65.82 O
ATOM 13 C1' A A 681 68.448 71.389 42.915 1.00 67.40 C
ATOM 14 N9 A A 681 67.711 70.377 43.690 1.00 69.71 N
ATOM 15 C8 A A 681 66.504 70.517 44.345 1.00 69.87 C
ATOM 16 N7 A A 681 66.070 69.410 44.910 1.00 69.24 N
ATOM 17 C5 A A 681 67.061 68.481 44.622 1.00 70.21 C
ATOM 18 C6 A A 681 67.198 67.112 44.933 1.00 70.98 C
ATOM 19 N6 A A 681 66.295 66.408 45.615 1.00 71.01 N
ATOM 20 N1 A A 681 68.309 66.480 44.503 1.00 71.22 N
ATOM 21 C2 A A 681 69.211 67.178 43.799 1.00 71.76 C
ATOM 22 N3 A A 681 69.194 68.459 43.436 1.00 71.30 N
ATOM 23 C4 A A 681 68.082 69.064 43.883 1.00 70.35 C
ATOM 24 P A A 682 65.815 72.474 39.090 1.00 68.98 P
ATOM 25 OP1 A A 682 65.828 73.336 37.881 1.00 69.62 O
ATOM 26 OP2 A A 682 64.531 72.213 39.781 1.00 68.93 O
ATOM 27 O5' A A 682 66.487 71.086 38.691 1.00 68.35 O
TER

ATOM 1 O3' C B 719 64.347 64.683 48.005 1.00 66.01 O
ATOM 2 P U B 720 65.324 63.428 47.823 1.00 67.18 P
ATOM 3 OP1 U B 720 66.601 63.897 47.205 1.00 67.69 O
ATOM 4 OP2 U B 720 64.536 62.355 47.167 1.00 67.24 O
ATOM 5 O5' U B 720 65.637 63.006 49.320 1.00 67.21 O
ATOM 6 C5' U B 720 66.188 63.962 50.232 1.00 71.82 C
ATOM 7 C4' U B 720 66.097 63.442 51.637 1.00 74.18 C
ATOM 8 O4' U B 720 64.715 63.389 52.065 1.00 74.36 O
ATOM 9 C3' U B 720 66.617 62.032 51.821 1.00 75.88 C
ATOM 10 O3' U B 720 68.022 62.055 52.003 1.00 80.45 O
ATOM 11 C2' U B 720 65.876 61.553 53.060 1.00 74.30 C
ATOM 12 O2' U B 720 66.537 61.956 54.239 1.00 72.97 O
ATOM 13 C1' U B 720 64.528 62.275 52.925 1.00 75.10 C
ATOM 14 N1 U B 720 63.464 61.429 52.360 1.00 75.74 N
ATOM 15 C2 U B 720 62.714 60.649 53.225 1.00 76.20 C
ATOM 16 O2 U B 720 62.843 60.686 54.439 1.00 76.33 O
ATOM 17 N3 U B 720 61.789 59.838 52.615 1.00 75.20 N
ATOM 18 C4 U B 720 61.519 59.755 51.266 1.00 75.90 C
ATOM 19 O4 U B 720 60.650 58.980 50.865 1.00 77.21 O
ATOM 20 C5 U B 720 62.303 60.618 50.451 1.00 76.58 C
ATOM 21 C6 U B 720 63.228 61.402 51.008 1.00 77.05 C
ATOM 22 P U B 721 68.873 60.725 51.742 1.00 84.11 P
ATOM 23 OP1 U B 721 70.302 61.020 52.046 1.00 83.19 O
ATOM 24 OP2 U B 721 68.500 60.185 50.402 1.00 83.17 O
ATOM 25 O5' U B 721 68.316 59.731 52.855 1.00 88.44 O
TER

Atoms:
OP1: (64.007,75.516,44.199)
OP2: (63.638,73.280,45.424)
C3': (66.970,72.501,41.436)
C1': (68.448,71.389,42.915)
C5': (66.507,74.385,43.098)
O4': (68.160,72.667,43.449)
C8: (66.504,70.517,44.345)
O2': (69.151,71.767,40.652)
C6: (67.198,67.112,44.933)
C5: (67.061,68.481,44.622)
C4: (68.082,69.064,43.883)
P: (64.565,74.297,44.852)
C4': (67.521,73.489,42.442)
C2': (68.032,71.412,41.442)
C2: (69.211,67.178,43.799)
N1: (68.309,66.480,44.503)
N3: (69.194,68.459,43.436)
N6: (66.295,66.408,45.615)
N7: (66.070,69.410,44.910)
N9: (67.711,70.377,43.690)
O5': (65.527,73.605,43.794)
O3': (66.839,73.100,40.158)
C4: (61.519,59.755,51.266)
N3: (61.789,59.838,52.615)
OP1: (66.601,63.897,47.205)
OP2: (64.536,62.355,47.167)
C2: (62.714,60.649,53.225)
C1': (64.528,62.275,52.925)
C3': (66.617,62.032,51.821)
O5': (65.637,63.006,49.320)
O4': (64.715,63.389,52.065)
C5': (66.188,63.962,50.232)
P: (65.324,63.428,47.823)
C4': (66.097,63.442,51.637)
C2': (65.876,61.553,53.060)
O2': (66.537,61.956,54.239)
N1: (63.464,61.429,52.360)
O4: (60.650,58.980,50.865)
O2: (62.843,60.686,54.439)
C6: (63.228,61.402,51.008)
C5: (62.303,60.618,50.451)
O3': (68.022,62.055,52.003)
Image (generated by PyMOL):
PyMOL image
show in jmol