Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P41:P58
Extra
PDB:
ATOM 1 O3' U A 40 -0.433 -47.444 4.763 1.00 60.68 O
ATOM 2 P A A 41 -0.864 -47.094 6.260 1.00 59.48 P
ATOM 3 OP1 A A 41 -2.079 -46.252 6.179 1.00 59.68 O
ATOM 4 OP2 A A 41 0.323 -46.598 6.993 1.00 59.54 O
ATOM 5 O5' A A 41 -1.285 -48.521 6.842 1.00 58.88 O
ATOM 6 C5' A A 41 -2.421 -49.194 6.306 1.00 57.96 C
ATOM 7 C4' A A 41 -3.400 -49.561 7.406 1.00 57.11 C
ATOM 8 O4' A A 41 -2.695 -50.333 8.403 1.00 56.44 O
ATOM 9 C3' A A 41 -4.052 -48.394 8.144 1.00 57.03 C
ATOM 10 O3' A A 41 -5.436 -48.668 8.313 1.00 57.76 O
ATOM 11 C2' A A 41 -3.323 -48.360 9.487 1.00 56.45 C
ATOM 12 O2' A A 41 -4.151 -47.932 10.547 1.00 57.01 O
ATOM 13 C1' A A 41 -2.986 -49.829 9.685 1.00 55.63 C
ATOM 14 N9 A A 41 -1.836 -50.074 10.549 1.00 54.17 N
ATOM 15 C8 A A 41 -0.511 -50.064 10.203 1.00 53.70 C
ATOM 16 N7 A A 41 0.301 -50.326 11.200 1.00 53.18 N
ATOM 17 C5 A A 41 -0.553 -50.521 12.272 1.00 53.04 C
ATOM 18 C6 A A 41 -0.327 -50.836 13.628 1.00 52.88 C
ATOM 19 N6 A A 41 0.890 -51.011 14.150 1.00 52.85 N
ATOM 20 N1 A A 41 -1.406 -50.967 14.432 1.00 52.78 N
ATOM 21 C2 A A 41 -2.630 -50.787 13.920 1.00 52.62 C
ATOM 22 N3 A A 41 -2.964 -50.494 12.664 1.00 52.74 N
ATOM 23 C4 A A 41 -1.873 -50.371 11.888 1.00 53.23 C
ATOM 24 P U A 42 -6.524 -48.102 7.287 1.00 58.69 P
ATOM 25 OP1 U A 42 -6.105 -48.431 5.905 1.00 58.87 O
ATOM 26 OP2 U A 42 -6.785 -46.695 7.654 1.00 58.89 O
ATOM 27 O5' U A 42 -7.820 -48.976 7.644 1.00 59.11 O
TER
ATOM 1 O3' A B 57 -0.414 -50.778 18.575 1.00 54.17 O
ATOM 2 P U B 58 0.453 -52.117 18.381 1.00 54.84 P
ATOM 3 OP1 U B 58 1.345 -52.268 19.551 1.00 54.76 O
ATOM 4 OP2 U B 58 1.025 -52.139 17.013 1.00 54.90 O
ATOM 5 O5' U B 58 -0.667 -53.245 18.454 1.00 55.40 O
ATOM 6 C5' U B 58 -1.639 -53.330 17.433 1.00 56.56 C
ATOM 7 C4' U B 58 -2.868 -54.037 17.963 1.00 57.49 C
ATOM 8 O4' U B 58 -3.316 -53.377 19.174 1.00 58.09 O
ATOM 9 C3' U B 58 -4.047 -54.046 17.003 1.00 57.86 C
ATOM 10 O3' U B 58 -4.639 -55.357 16.979 1.00 57.89 O
ATOM 11 C2' U B 58 -4.966 -52.965 17.573 1.00 58.16 C
ATOM 12 O2' U B 58 -6.324 -53.224 17.307 1.00 58.58 O
ATOM 13 C1' U B 58 -4.692 -53.073 19.070 1.00 58.62 C
ATOM 14 N1 U B 58 -4.983 -51.842 19.883 1.00 59.35 N
ATOM 15 C2 U B 58 -6.122 -51.792 20.676 1.00 59.84 C
ATOM 16 O2 U B 58 -6.932 -52.699 20.766 1.00 60.31 O
ATOM 17 N3 U B 58 -6.284 -50.620 21.382 1.00 59.92 N
ATOM 18 C4 U B 58 -5.443 -49.517 21.379 1.00 59.83 C
ATOM 19 O4 U B 58 -5.721 -48.536 22.061 1.00 59.71 O
ATOM 20 C5 U B 58 -4.280 -49.641 20.532 1.00 59.75 C
ATOM 21 C6 U B 58 -4.099 -50.773 19.837 1.00 59.57 C
ATOM 22 P G B 59 -4.336 -56.385 15.779 1.00 58.29 P
ATOM 23 OP1 G B 59 -5.172 -57.592 15.978 1.00 57.82 O
ATOM 24 OP2 G B 59 -2.867 -56.531 15.655 1.00 58.05 O
ATOM 25 O5' G B 59 -4.881 -55.608 14.489 1.00 57.68 O
TER
ATOM 2 P A A 41 -0.864 -47.094 6.260 1.00 59.48 P
ATOM 3 OP1 A A 41 -2.079 -46.252 6.179 1.00 59.68 O
ATOM 4 OP2 A A 41 0.323 -46.598 6.993 1.00 59.54 O
ATOM 5 O5' A A 41 -1.285 -48.521 6.842 1.00 58.88 O
ATOM 6 C5' A A 41 -2.421 -49.194 6.306 1.00 57.96 C
ATOM 7 C4' A A 41 -3.400 -49.561 7.406 1.00 57.11 C
ATOM 8 O4' A A 41 -2.695 -50.333 8.403 1.00 56.44 O
ATOM 9 C3' A A 41 -4.052 -48.394 8.144 1.00 57.03 C
ATOM 10 O3' A A 41 -5.436 -48.668 8.313 1.00 57.76 O
ATOM 11 C2' A A 41 -3.323 -48.360 9.487 1.00 56.45 C
ATOM 12 O2' A A 41 -4.151 -47.932 10.547 1.00 57.01 O
ATOM 13 C1' A A 41 -2.986 -49.829 9.685 1.00 55.63 C
ATOM 14 N9 A A 41 -1.836 -50.074 10.549 1.00 54.17 N
ATOM 15 C8 A A 41 -0.511 -50.064 10.203 1.00 53.70 C
ATOM 16 N7 A A 41 0.301 -50.326 11.200 1.00 53.18 N
ATOM 17 C5 A A 41 -0.553 -50.521 12.272 1.00 53.04 C
ATOM 18 C6 A A 41 -0.327 -50.836 13.628 1.00 52.88 C
ATOM 19 N6 A A 41 0.890 -51.011 14.150 1.00 52.85 N
ATOM 20 N1 A A 41 -1.406 -50.967 14.432 1.00 52.78 N
ATOM 21 C2 A A 41 -2.630 -50.787 13.920 1.00 52.62 C
ATOM 22 N3 A A 41 -2.964 -50.494 12.664 1.00 52.74 N
ATOM 23 C4 A A 41 -1.873 -50.371 11.888 1.00 53.23 C
ATOM 24 P U A 42 -6.524 -48.102 7.287 1.00 58.69 P
ATOM 25 OP1 U A 42 -6.105 -48.431 5.905 1.00 58.87 O
ATOM 26 OP2 U A 42 -6.785 -46.695 7.654 1.00 58.89 O
ATOM 27 O5' U A 42 -7.820 -48.976 7.644 1.00 59.11 O
TER
ATOM 1 O3' A B 57 -0.414 -50.778 18.575 1.00 54.17 O
ATOM 2 P U B 58 0.453 -52.117 18.381 1.00 54.84 P
ATOM 3 OP1 U B 58 1.345 -52.268 19.551 1.00 54.76 O
ATOM 4 OP2 U B 58 1.025 -52.139 17.013 1.00 54.90 O
ATOM 5 O5' U B 58 -0.667 -53.245 18.454 1.00 55.40 O
ATOM 6 C5' U B 58 -1.639 -53.330 17.433 1.00 56.56 C
ATOM 7 C4' U B 58 -2.868 -54.037 17.963 1.00 57.49 C
ATOM 8 O4' U B 58 -3.316 -53.377 19.174 1.00 58.09 O
ATOM 9 C3' U B 58 -4.047 -54.046 17.003 1.00 57.86 C
ATOM 10 O3' U B 58 -4.639 -55.357 16.979 1.00 57.89 O
ATOM 11 C2' U B 58 -4.966 -52.965 17.573 1.00 58.16 C
ATOM 12 O2' U B 58 -6.324 -53.224 17.307 1.00 58.58 O
ATOM 13 C1' U B 58 -4.692 -53.073 19.070 1.00 58.62 C
ATOM 14 N1 U B 58 -4.983 -51.842 19.883 1.00 59.35 N
ATOM 15 C2 U B 58 -6.122 -51.792 20.676 1.00 59.84 C
ATOM 16 O2 U B 58 -6.932 -52.699 20.766 1.00 60.31 O
ATOM 17 N3 U B 58 -6.284 -50.620 21.382 1.00 59.92 N
ATOM 18 C4 U B 58 -5.443 -49.517 21.379 1.00 59.83 C
ATOM 19 O4 U B 58 -5.721 -48.536 22.061 1.00 59.71 O
ATOM 20 C5 U B 58 -4.280 -49.641 20.532 1.00 59.75 C
ATOM 21 C6 U B 58 -4.099 -50.773 19.837 1.00 59.57 C
ATOM 22 P G B 59 -4.336 -56.385 15.779 1.00 58.29 P
ATOM 23 OP1 G B 59 -5.172 -57.592 15.978 1.00 57.82 O
ATOM 24 OP2 G B 59 -2.867 -56.531 15.655 1.00 58.05 O
ATOM 25 O5' G B 59 -4.881 -55.608 14.489 1.00 57.68 O
TER
Atoms:
OP1: (-2.079,-46.252,6.179)
OP2: (0.323,-46.598,6.993)
C3': (-4.052,-48.394,8.144)
C1': (-2.986,-49.829,9.685)
C5': (-2.421,-49.194,6.306)
O4': (-2.695,-50.333,8.403)
C8: (-0.511,-50.064,10.203)
O2': (-4.151,-47.932,10.547)
C6: (-0.327,-50.836,13.628)
C5: (-0.553,-50.521,12.272)
C4: (-1.873,-50.371,11.888)
P: (-0.864,-47.094,6.260)
C4': (-3.400,-49.561,7.406)
C2': (-3.323,-48.360,9.487)
C2: (-2.630,-50.787,13.920)
N1: (-1.406,-50.967,14.432)
N3: (-2.964,-50.494,12.664)
N6: (0.890,-51.011,14.150)
N7: (0.301,-50.326,11.200)
N9: (-1.836,-50.074,10.549)
O5': (-1.285,-48.521,6.842)
O3': (-5.436,-48.668,8.313)
OP2: (0.323,-46.598,6.993)
C3': (-4.052,-48.394,8.144)
C1': (-2.986,-49.829,9.685)
C5': (-2.421,-49.194,6.306)
O4': (-2.695,-50.333,8.403)
C8: (-0.511,-50.064,10.203)
O2': (-4.151,-47.932,10.547)
C6: (-0.327,-50.836,13.628)
C5: (-0.553,-50.521,12.272)
C4: (-1.873,-50.371,11.888)
P: (-0.864,-47.094,6.260)
C4': (-3.400,-49.561,7.406)
C2': (-3.323,-48.360,9.487)
C2: (-2.630,-50.787,13.920)
N1: (-1.406,-50.967,14.432)
N3: (-2.964,-50.494,12.664)
N6: (0.890,-51.011,14.150)
N7: (0.301,-50.326,11.200)
N9: (-1.836,-50.074,10.549)
O5': (-1.285,-48.521,6.842)
O3': (-5.436,-48.668,8.313)
C4: (-5.443,-49.517,21.379)
N3: (-6.284,-50.620,21.382)
OP1: (1.345,-52.268,19.551)
OP2: (1.025,-52.139,17.013)
C2: (-6.122,-51.792,20.676)
C1': (-4.692,-53.073,19.070)
C3': (-4.047,-54.046,17.003)
O5': (-0.667,-53.245,18.454)
O4': (-3.316,-53.377,19.174)
C5': (-1.639,-53.330,17.433)
P: (0.453,-52.117,18.381)
C4': (-2.868,-54.037,17.963)
C2': (-4.966,-52.965,17.573)
O2': (-6.324,-53.224,17.307)
N1: (-4.983,-51.842,19.883)
O4: (-5.721,-48.536,22.061)
O2: (-6.932,-52.699,20.766)
C6: (-4.099,-50.773,19.837)
C5: (-4.280,-49.641,20.532)
O3': (-4.639,-55.357,16.979)
N3: (-6.284,-50.620,21.382)
OP1: (1.345,-52.268,19.551)
OP2: (1.025,-52.139,17.013)
C2: (-6.122,-51.792,20.676)
C1': (-4.692,-53.073,19.070)
C3': (-4.047,-54.046,17.003)
O5': (-0.667,-53.245,18.454)
O4': (-3.316,-53.377,19.174)
C5': (-1.639,-53.330,17.433)
P: (0.453,-52.117,18.381)
C4': (-2.868,-54.037,17.963)
C2': (-4.966,-52.965,17.573)
O2': (-6.324,-53.224,17.307)
N1: (-4.983,-51.842,19.883)
O4: (-5.721,-48.536,22.061)
O2: (-6.932,-52.699,20.766)
C6: (-4.099,-50.773,19.837)
C5: (-4.280,-49.641,20.532)
O3': (-4.639,-55.357,16.979)
Image (generated by PyMOL):